RNA–Protein interactions for RNA: ENST00000623687.1

DUX4L28-201, Transcript of double homeobox 4 like 28, humanhuman

BASIC

Gene DUX4L28, Length 678 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4L28-201ENST00000623687 TCIRG1Q13488 830 aa34.66■■■■□ 3.14
DUX4L28-201ENST00000623687 HYPKQ9NX55 129 aa34.66■■■■□ 3.14
DUX4L28-201ENST00000623687 LAMB2P55268 1798 aa34.66■■■■□ 3.14
DUX4L28-201ENST00000623687 ZC3H4Q9UPT8 1303 aaKnown RBP34.65■■■■□ 3.14
DUX4L28-201ENST00000623687 SOGA3Q5TF21 947 aa34.65■■■■□ 3.14
DUX4L28-201ENST00000623687 NLRP10Q86W26 655 aa34.65■■■■□ 3.14
DUX4L28-201ENST00000623687 UTP14AQ9BVJ6 771 aaKnown RBP34.65■■■■□ 3.14
DUX4L28-201ENST00000623687 C3orf67Q6ZVT6 689 aa34.64■■■■□ 3.14
DUX4L28-201ENST00000623687 PLBD2Q8NHP8 589 aa34.64■■■■□ 3.14
DUX4L28-201ENST00000623687 TSR2Q969E8 191 aaKnown RBP34.64■■■■□ 3.14
DUX4L28-201ENST00000623687 TAOK3Q9H2K8 898 aa34.64■■■■□ 3.14
DUX4L28-201ENST00000623687 ALDH1B1P30837 517 aa34.63■■■■□ 3.13
DUX4L28-201ENST00000623687 NCBP3Q53F19 620 aaKnown RBP34.63■■■■□ 3.13
DUX4L28-201ENST00000623687 OLFM4Q6UX06 510 aa34.63■■■■□ 3.13
DUX4L28-201ENST00000623687 ANKRD13DQ6ZTN6 518 aa34.62■■■■□ 3.13
DUX4L28-201ENST00000623687 CCDC93Q567U6 631 aa34.61■■■■□ 3.13
DUX4L28-201ENST00000623687 TSPYL6Q8N831 410 aa34.61■■■■□ 3.13
DUX4L28-201ENST00000623687 KDM2BQ8NHM5 1336 aa34.6■■■■□ 3.13
DUX4L28-201ENST00000623687 HOXA10P31260 410 aaPredicted RBP34.6■■■■□ 3.13
DUX4L28-201ENST00000623687 SLC10A5Q5PT55 438 aa34.6■■■■□ 3.13
DUX4L28-201ENST00000623687 RPGRQ92834 1020 aaKnown RBP34.6■■■■□ 3.13
DUX4L28-201ENST00000623687 RNF123Q5XPI4 1314 aa34.59■■■■□ 3.13
DUX4L28-201ENST00000623687 PHAXQ9H814 394 aaKnown RBP34.59■■■■□ 3.13
DUX4L28-201ENST00000623687 IL16Q14005 1332 aa34.58■■■■□ 3.13
DUX4L28-201ENST00000623687 SYNE4Q8N205 404 aa34.58■■■■□ 3.13
DUX4L28-201ENST00000623687 SNED1Q8TER0 1413 aa34.57■■■■□ 3.13
DUX4L28-201ENST00000623687 FAM9BQ8IZU0 186 aa34.57■■■■□ 3.12
DUX4L28-201ENST00000623687 ZNF428Q96B54 188 aa34.57■■■■□ 3.12
DUX4L28-201ENST00000623687 SALL2Q9Y467 1007 aaPredicted RBP34.57■■■■□ 3.12
DUX4L28-201ENST00000623687 DDX60Q8IY21 1712 aaKnown RBP34.57■■■■□ 3.12
DUX4L28-201ENST00000623687 NLRP3Q96P20 1036 aa34.56■■■■□ 3.12
DUX4L28-201ENST00000623687 ISCA1Q9BUE6 129 aa34.56■■■■□ 3.12
DUX4L28-201ENST00000623687 TRMT112Q9UI30 125 aaKnown RBP34.56■■■■□ 3.12
DUX4L28-201ENST00000623687 GLTPD2A6NH11 291 aa34.54■■■■□ 3.12
DUX4L28-201ENST00000623687 RBM17Q96I25 401 aaKnown RBP34.54■■■■□ 3.12
DUX4L28-201ENST00000623687 CRAMP1Q96RY5 1269 aa34.54■■■■□ 3.12
DUX4L28-201ENST00000623687 RRAGCQ9HB90 399 aa34.54■■■■□ 3.12
DUX4L28-201ENST00000623687 ATP5J2-PTCD1G3V325 749 aa34.53■■■■□ 3.12
DUX4L28-201ENST00000623687 HCLS1P14317 486 aaPredicted RBP34.53■■■■□ 3.12
DUX4L28-201ENST00000623687 FKBP4Q02790 459 aaKnown RBP eCLIP34.53■■■■□ 3.12
DUX4L28-201ENST00000623687 CCDC30Q5VVM6 783 aa34.53■■■■□ 3.12
DUX4L28-201ENST00000623687 SH3TC1Q8TE82 1336 aa34.53■■■■□ 3.12
DUX4L28-201ENST00000623687 SLC51AQ86UW1 340 aa34.52■■■■□ 3.12
DUX4L28-201ENST00000623687 TOMM70O94826 608 aa34.51■■■■□ 3.12
DUX4L28-201ENST00000623687 GOLGA2Q08379 1002 aa34.51■■■■□ 3.12
DUX4L28-201ENST00000623687 RTKN2Q8IZC4 609 aa34.51■■■■□ 3.12
DUX4L28-201ENST00000623687 RIC3Q7Z5B4 369 aa34.5■■■■□ 3.11
DUX4L28-201ENST00000623687 FANCIQ9NVI1 1328 aa34.5■■■■□ 3.11
DUX4L28-201ENST00000623687 WDR90Q96KV7 1748 aa34.5■■■■□ 3.11
DUX4L28-201ENST00000623687 TWISTNBQ3B726 338 aaPredicted RBP34.49■■■■□ 3.11
DUX4L28-201ENST00000623687 WDR63Q8IWG1 891 aa34.49■■■■□ 3.11
DUX4L28-201ENST00000623687 TAF1P21675 1872 aa34.48■■■■□ 3.11
DUX4L28-201ENST00000623687 PPEF1O14829 653 aaPredicted RBP34.48■■■■□ 3.11
DUX4L28-201ENST00000623687 CHMP4AQ9BY43 222 aa34.48■■■■□ 3.11
DUX4L28-201ENST00000623687 ZNF277Q9NRM2 450 aaPredicted RBP34.48■■■■□ 3.11
DUX4L28-201ENST00000623687 ABCC4O15439 1325 aa34.47■■■■□ 3.11
DUX4L28-201ENST00000623687 TCERG1O14776 1098 aaKnown RBP34.46■■■■□ 3.11
DUX4L28-201ENST00000623687 TRIM28Q13263 835 aaKnown RBP34.46■■■■□ 3.11
DUX4L28-201ENST00000623687 CC2D2BQ6DHV5 1058 aa34.46■■■■□ 3.11
DUX4L28-201ENST00000623687 FAM89AQ96GI7 184 aa34.46■■■■□ 3.11
DUX4L28-201ENST00000623687 DPY19L2Q6NUT2 758 aa34.44■■■■□ 3.1
DUX4L28-201ENST00000623687 C16orf71Q8IYS4 520 aaPredicted RBP34.44■■■■□ 3.1
DUX4L28-201ENST00000623687 PSMD1Q99460 953 aa34.44■■■■□ 3.1
DUX4L28-201ENST00000623687 MYD88Q99836 296 aa34.44■■■■□ 3.1
DUX4L28-201ENST00000623687 HSPA6P17066 643 aa34.43■■■■□ 3.1
DUX4L28-201ENST00000623687 SPINK5Q9NQ38 1064 aaPredicted RBP34.43■■■■□ 3.1
DUX4L28-201ENST00000623687 RTL5Q5HYW3 569 aaPredicted RBP34.42■■■■□ 3.1
DUX4L28-201ENST00000623687 RBM46Q8TBY0 533 aaKnown RBP34.42■■■■□ 3.1
DUX4L28-201ENST00000623687 STK31Q9BXU1 1019 aa34.42■■■■□ 3.1
DUX4L28-201ENST00000623687 POTECB2RU33 542 aa34.41■■■■□ 3.1
DUX4L28-201ENST00000623687 IARSP41252 1262 aaKnown RBP34.41■■■■□ 3.1
DUX4L28-201ENST00000623687 COL4A5P29400 1685 aa34.41■■■■□ 3.1
DUX4L28-201ENST00000623687 DDX58O95786 925 aaKnown RBP34.4■■■■□ 3.1
DUX4L28-201ENST00000623687 VEGFAP15692 232 aaPredicted RBP34.4■■■■□ 3.1
DUX4L28-201ENST00000623687 METTL22Q9BUU2 404 aaPredicted RBP34.4■■■■□ 3.1
DUX4L28-201ENST00000623687 G2E3Q7L622 706 aa34.39■■■■□ 3.1
DUX4L28-201ENST00000623687 MAP3K2Q9Y2U5 619 aa34.39■■■■□ 3.1
DUX4L28-201ENST00000623687 ATP6V0A2Q9Y487 856 aa34.39■■■■□ 3.1
DUX4L28-201ENST00000623687 CACNA1FO60840 1977 aa34.38■■■■□ 3.09
DUX4L28-201ENST00000623687 DDNO94850 711 aaPredicted RBP34.38■■■■□ 3.09
DUX4L28-201ENST00000623687 DDX46Q7L014 1031 aaKnown RBP34.38■■■■□ 3.09
DUX4L28-201ENST00000623687 COL4A1P02462 1669 aa34.38■■■■□ 3.09
DUX4L28-201ENST00000623687 EXOSC9Q06265 439 aaKnown RBP34.37■■■■□ 3.09
DUX4L28-201ENST00000623687 GRIPAP1Q4V328 841 aa34.37■■■■□ 3.09
DUX4L28-201ENST00000623687 ZNF541Q9H0D2 1346 aa34.36■■■■□ 3.09
DUX4L28-201ENST00000623687 LRRC37AA6NMS7 1700 aa34.36■■■■□ 3.09
DUX4L28-201ENST00000623687 IRS4O14654 1257 aaPredicted RBP34.36■■■■□ 3.09
DUX4L28-201ENST00000623687 BBOX1O75936 387 aa34.36■■■■□ 3.09
DUX4L28-201ENST00000623687 GRAPQ13588 217 aa34.36■■■■□ 3.09
DUX4L28-201ENST00000623687 KSR2Q6VAB6 950 aa34.36■■■■□ 3.09
DUX4L28-201ENST00000623687 CCDC191Q8NCU4 936 aa34.36■■■■□ 3.09
DUX4L28-201ENST00000623687 GRAPLQ8TC17 118 aaPredicted RBP34.36■■■■□ 3.09
DUX4L28-201ENST00000623687 PI4KAP2A4QPH2 592 aa34.35■■■■□ 3.09
DUX4L28-201ENST00000623687 VAMP4O75379 141 aa34.35■■■■□ 3.09
DUX4L28-201ENST00000623687 SLC4A2P04920 1241 aa34.35■■■■□ 3.09
DUX4L28-201ENST00000623687 SF3B3Q15393 1217 aaKnown RBP34.35■■■■□ 3.09
DUX4L28-201ENST00000623687 PI4KAP1Q8N8J0 262 aa34.35■■■■□ 3.09
DUX4L28-201ENST00000623687 ZBTB38Q8NAP3 1195 aaPredicted RBP34.35■■■■□ 3.09
DUX4L28-201ENST00000623687 CEP350Q5VT06 3117 aa34.33■■■■□ 3.09
DUX4L28-201ENST00000623687 SP8Q8IXZ3 490 aa34.33■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms