RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 TM6SF1Q9BZW5 370 aa10.01□□□□□ -0.81
SND1-IT1-201ENST00000623342 CCDC171Q6TFL3 1326 aa10.01□□□□□ -0.81
SND1-IT1-201ENST00000623342 WDR17Q8IZU2 1322 aa10.01□□□□□ -0.81
SND1-IT1-201ENST00000623342 PCDH11XQ9BZA7 1347 aa10.01□□□□□ -0.81
SND1-IT1-201ENST00000623342 PCDH11YQ9BZA8 1340 aa10.01□□□□□ -0.81
SND1-IT1-201ENST00000623342 ARFGEF2Q9Y6D5 1785 aa10.01□□□□□ -0.81
SND1-IT1-201ENST00000623342 GLI3P10071 1580 aa10.01□□□□□ -0.81
SND1-IT1-201ENST00000623342 AFDNP55196 1824 aaKnown RBP10.01□□□□□ -0.81
SND1-IT1-201ENST00000623342 GOLGB1Q14789 3259 aaKnown RBP10.01□□□□□ -0.81
SND1-IT1-201ENST00000623342 MBD3O95983 291 aa10.01□□□□□ -0.81
SND1-IT1-201ENST00000623342 RABL6Q3YEC7 729 aaPredicted RBP10.01□□□□□ -0.81
SND1-IT1-201ENST00000623342 PRPF40BQ6NWY9 871 aaKnown RBP10.01□□□□□ -0.81
SND1-IT1-201ENST00000623342 RUFY3Q7L099 469 aa10.01□□□□□ -0.81
SND1-IT1-201ENST00000623342 CHAMP1Q96JM3 812 aa10.01□□□□□ -0.81
SND1-IT1-201ENST00000623342 SNRKQ9NRH2 765 aa10.01□□□□□ -0.81
SND1-IT1-201ENST00000623342 ERBB4Q15303 1308 aa10.01□□□□□ -0.81
SND1-IT1-201ENST00000623342 RFX5P48382 616 aaPredicted RBP10□□□□□ -0.81
SND1-IT1-201ENST00000623342 NASPP49321 788 aaPredicted RBP10□□□□□ -0.81
SND1-IT1-201ENST00000623342 NMIQ13287 307 aaPredicted RBP10□□□□□ -0.81
SND1-IT1-201ENST00000623342 NECTIN1Q15223 517 aa10□□□□□ -0.81
SND1-IT1-201ENST00000623342 VPS53Q5VIR6 699 aa10□□□□□ -0.81
SND1-IT1-201ENST00000623342 TOM1L2Q6ZVM7 507 aa10□□□□□ -0.81
SND1-IT1-201ENST00000623342 UBE3BQ7Z3V4 1068 aa10□□□□□ -0.81
SND1-IT1-201ENST00000623342 ZCRB1Q8TBF4 217 aaKnown RBP10□□□□□ -0.81
SND1-IT1-201ENST00000623342 BOLA2Q9H3K6 86 aa10□□□□□ -0.81
SND1-IT1-201ENST00000623342 ZSWIM6Q9HCJ5 1215 aa10□□□□□ -0.81
SND1-IT1-201ENST00000623342 RRAGDQ9NQL2 400 aaPredicted RBP10□□□□□ -0.81
SND1-IT1-201ENST00000623342 PRDM11Q9NQV5 511 aa10□□□□□ -0.81
SND1-IT1-201ENST00000623342 ZSCAN21Q9Y5A6 473 aaPredicted RBP10□□□□□ -0.81
SND1-IT1-201ENST00000623342 A0A087WZG4 1122 aa10□□□□□ -0.81
SND1-IT1-201ENST00000623342 ZKSCAN1P17029 563 aaPredicted RBP10□□□□□ -0.81
SND1-IT1-201ENST00000623342 PTPN12Q05209 780 aaKnown RBP10□□□□□ -0.81
SND1-IT1-201ENST00000623342 JARID2Q92833 1246 aaPredicted RBP10□□□□□ -0.81
SND1-IT1-201ENST00000623342 FAM227BQ96M60 508 aa10□□□□□ -0.81
SND1-IT1-201ENST00000623342 JAKMIP1Q96N16 626 aaKnown RBP10□□□□□ -0.81
SND1-IT1-201ENST00000623342 FSD1Q9BTV5 496 aa10□□□□□ -0.81
SND1-IT1-201ENST00000623342 PDRG1Q9NUG6 133 aa10□□□□□ -0.81
SND1-IT1-201ENST00000623342 CYP46A1Q9Y6A2 500 aa10□□□□□ -0.81
SND1-IT1-201ENST00000623342 ERVV-2B6SEH9 535 aa9.99□□□□□ -0.81
SND1-IT1-201ENST00000623342 ATP5J2-PTCD1G3V325 749 aa9.99□□□□□ -0.81
SND1-IT1-201ENST00000623342 PTCD1O75127 700 aaKnown RBP9.99□□□□□ -0.81
SND1-IT1-201ENST00000623342 MAP4K1Q92918 833 aa9.99□□□□□ -0.81
SND1-IT1-201ENST00000623342 RBM8AQ9Y5S9 174 aaKnown RBP9.99□□□□□ -0.81
SND1-IT1-201ENST00000623342 RPAP1Q9BWH6 1393 aaPredicted RBP9.99□□□□□ -0.81
SND1-IT1-201ENST00000623342 CPA1P15085 419 aa9.99□□□□□ -0.81
SND1-IT1-201ENST00000623342 KCNJ4P48050 445 aa9.99□□□□□ -0.81
SND1-IT1-201ENST00000623342 ADCK5Q3MIX3 580 aa9.99□□□□□ -0.81
SND1-IT1-201ENST00000623342 TNNI3KQ59H18 835 aa9.99□□□□□ -0.81
SND1-IT1-201ENST00000623342 CREB3L3Q68CJ9 461 aa9.99□□□□□ -0.81
SND1-IT1-201ENST00000623342 ANP32BQ92688 251 aaKnown RBP9.99□□□□□ -0.81
SND1-IT1-201ENST00000623342 ZSCAN31Q96LW9 406 aaPredicted RBP9.99□□□□□ -0.81
SND1-IT1-201ENST00000623342 SLAIN2Q9P270 581 aa9.99□□□□□ -0.81
SND1-IT1-201ENST00000623342 RBM27Q9P2N5 1060 aaKnown RBP9.99□□□□□ -0.81
SND1-IT1-201ENST00000623342 FPGT-TNNI3KV9GXZ4 949 aa9.99□□□□□ -0.81
SND1-IT1-201ENST00000623342 NBPF26B4DH59 902 aa9.98□□□□□ -0.81
SND1-IT1-201ENST00000623342 COL5A2P05997 1499 aaPredicted RBP9.98□□□□□ -0.81
SND1-IT1-201ENST00000623342 ATP5JP18859 108 aa9.98□□□□□ -0.81
SND1-IT1-201ENST00000623342 CASP7P55210 303 aa9.98□□□□□ -0.81
SND1-IT1-201ENST00000623342 SOS2Q07890 1332 aaPredicted RBP9.98□□□□□ -0.81
SND1-IT1-201ENST00000623342 CCDC173Q0VFZ6 552 aa9.98□□□□□ -0.81
SND1-IT1-201ENST00000623342 TFCP2Q12800 502 aa9.98□□□□□ -0.81
SND1-IT1-201ENST00000623342 NBPF14Q5TI25 921 aa9.98□□□□□ -0.81
SND1-IT1-201ENST00000623342 NBPF10Q6P3W6 841 aaKnown RBP9.98□□□□□ -0.81
SND1-IT1-201ENST00000623342 NBPF15Q8N660 670 aa9.98□□□□□ -0.81
SND1-IT1-201ENST00000623342 SMC3Q9UQE7 1217 aa9.98□□□□□ -0.81
SND1-IT1-201ENST00000623342 MED23Q9ULK4 1368 aa9.98□□□□□ -0.81
SND1-IT1-201ENST00000623342 A0A0D9SFI3 127 aa9.98□□□□□ -0.81
SND1-IT1-201ENST00000623342 PSMA5P28066 241 aa9.98□□□□□ -0.81
SND1-IT1-201ENST00000623342 NKX1-1Q15270 411 aaPredicted RBP9.98□□□□□ -0.81
SND1-IT1-201ENST00000623342 TRIM44Q96DX7 344 aaPredicted RBP9.98□□□□□ -0.81
SND1-IT1-201ENST00000623342 LARP6Q9BRS8 491 aaKnown RBP9.98□□□□□ -0.81
SND1-IT1-201ENST00000623342 SH2B1Q9NRF2 756 aaPredicted RBP9.98□□□□□ -0.81
SND1-IT1-201ENST00000623342 TMEM63CQ9P1W3 806 aa9.98□□□□□ -0.81
SND1-IT1-201ENST00000623342 DBNLQ9UJU6 430 aaKnown RBP9.98□□□□□ -0.81
SND1-IT1-201ENST00000623342 NSFL1CQ9UNZ2 370 aaKnown RBP9.98□□□□□ -0.81
SND1-IT1-201ENST00000623342 UBR2Q8IWV8 1755 aa9.98□□□□□ -0.81
SND1-IT1-201ENST00000623342 SLC27A2O14975 620 aa9.97□□□□□ -0.81
SND1-IT1-201ENST00000623342 ZSCAN22P10073 491 aaPredicted RBP9.97□□□□□ -0.81
SND1-IT1-201ENST00000623342 RNF20Q5VTR2 975 aa9.97□□□□□ -0.81
SND1-IT1-201ENST00000623342 PPP1R9BQ96SB3 815 aa9.97□□□□□ -0.81
SND1-IT1-201ENST00000623342 H7C1W4 665 aa9.97□□□□□ -0.81
SND1-IT1-201ENST00000623342 STX6O43752 255 aa9.97□□□□□ -0.81
SND1-IT1-201ENST00000623342 LARGE1O95461 756 aa9.97□□□□□ -0.81
SND1-IT1-201ENST00000623342 IL2RBP14784 551 aa9.97□□□□□ -0.81
SND1-IT1-201ENST00000623342 PRIM1P49642 420 aaKnown RBP9.97□□□□□ -0.81
SND1-IT1-201ENST00000623342 LRSAM1Q6UWE0 723 aa9.97□□□□□ -0.81
SND1-IT1-201ENST00000623342 CARD10Q9BWT7 1032 aa9.97□□□□□ -0.81
SND1-IT1-201ENST00000623342 KCPQ6ZWJ8 1503 aa9.97□□□□□ -0.81
SND1-IT1-201ENST00000623342 RFX7Q2KHR2 1363 aa9.96□□□□□ -0.81
SND1-IT1-201ENST00000623342 JCADQ9P266 1359 aa9.96□□□□□ -0.81
SND1-IT1-201ENST00000623342 PAPPAQ13219 1627 aa9.96□□□□□ -0.81
SND1-IT1-201ENST00000623342 SYT1P21579 422 aa9.96□□□□□ -0.81
SND1-IT1-201ENST00000623342 FOXO4P98177 505 aa9.96□□□□□ -0.81
SND1-IT1-201ENST00000623342 LMBR1LQ6UX01 489 aa9.96□□□□□ -0.81
SND1-IT1-201ENST00000623342 CCDC83Q8IWF9 413 aa9.96□□□□□ -0.81
SND1-IT1-201ENST00000623342 SYAP1Q96A49 352 aaPredicted RBP9.96□□□□□ -0.81
SND1-IT1-201ENST00000623342 CWC25Q9NXE8 425 aaPredicted RBP9.96□□□□□ -0.81
SND1-IT1-201ENST00000623342 FOXD4L6Q3SYB3 417 aaPredicted RBP9.96□□□□□ -0.82
SND1-IT1-201ENST00000623342 FOXD4L3Q6VB84 417 aaPredicted RBP9.96□□□□□ -0.82
SND1-IT1-201ENST00000623342 TTLL7Q6ZT98 887 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms