RNA–Protein interactions for RNA: ENST00000622829.4

GTF2IP1-210, Transcript of general transcription factor IIi pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IP1, Length 3,605 nt, Biotype processed transcript, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IP1-210ENST00000622829 LEO1Q8WVC0 666 aaPredicted RBP21.53■■□□□ 1.04
GTF2IP1-210ENST00000622829 HYPKQ9NX55 129 aa21.53■■□□□ 1.04
GTF2IP1-210ENST00000622829 MARCKSP29966 332 aaPredicted RBP21.53■■□□□ 1.04
GTF2IP1-210ENST00000622829 TAF6LQ9Y6J9 622 aa21.53■■□□□ 1.04
GTF2IP1-210ENST00000622829 CLTCL1P53675 1640 aa21.53■■□□□ 1.04
GTF2IP1-210ENST00000622829 Q6ZUG5 572 aa21.53■■□□□ 1.04
GTF2IP1-210ENST00000622829 YTHDC2Q9H6S0 1430 aaKnown RBP21.52■■□□□ 1.04
GTF2IP1-210ENST00000622829 ZNF530Q6P9A1 599 aaPredicted RBP21.52■■□□□ 1.04
GTF2IP1-210ENST00000622829 SH2B1Q9NRF2 756 aaPredicted RBP21.52■■□□□ 1.04
GTF2IP1-210ENST00000622829 ATP5J2-PTCD1G3V325 749 aa21.52■■□□□ 1.04
GTF2IP1-210ENST00000622829 PTCD1O75127 700 aaKnown RBP21.52■■□□□ 1.04
GTF2IP1-210ENST00000622829 TRIM34Q9BYJ4 488 aa21.52■■□□□ 1.04
GTF2IP1-210ENST00000622829 IFNKQ9P0W0 207 aa21.52■■□□□ 1.04
GTF2IP1-210ENST00000622829 BTBD11A6QL63 1104 aa21.52■■□□□ 1.03
GTF2IP1-210ENST00000622829 NEK11Q8NG66 645 aa21.52■■□□□ 1.03
GTF2IP1-210ENST00000622829 ARHGEF5Q12774 1597 aa21.51■■□□□ 1.03
GTF2IP1-210ENST00000622829 IQSEC2Q5JU85 1478 aa21.51■■□□□ 1.03
GTF2IP1-210ENST00000622829 NPATQ14207 1427 aa21.51■■□□□ 1.03
GTF2IP1-210ENST00000622829 MADDQ8WXG6 1647 aa21.51■■□□□ 1.03
GTF2IP1-210ENST00000622829 KIF20AO95235 890 aa21.51■■□□□ 1.03
GTF2IP1-210ENST00000622829 APOBRQ0VD83 1088 aa21.51■■□□□ 1.03
GTF2IP1-210ENST00000622829 C11orf57Q6ZUT1 292 aaPredicted RBP21.51■■□□□ 1.03
GTF2IP1-210ENST00000622829 FKBP4Q02790 459 aaKnown RBP eCLIP21.51■■□□□ 1.03
GTF2IP1-210ENST00000622829 PDE4CQ08493 712 aa21.51■■□□□ 1.03
GTF2IP1-210ENST00000622829 DDX19AQ9NUU7 478 aaKnown RBP21.51■■□□□ 1.03
GTF2IP1-210ENST00000622829 PHACTR2O75167 634 aa21.5■■□□□ 1.03
GTF2IP1-210ENST00000622829 C1orf141Q5JVX7 400 aa21.5■■□□□ 1.03
GTF2IP1-210ENST00000622829 LGR6Q9HBX8 967 aa21.5■■□□□ 1.03
GTF2IP1-210ENST00000622829 LSG1Q9H089 658 aaKnown RBP21.5■■□□□ 1.03
GTF2IP1-210ENST00000622829 TLR7Q9NYK1 1049 aaKnown RBP21.5■■□□□ 1.03
GTF2IP1-210ENST00000622829 GYS2P54840 703 aa21.49■■□□□ 1.03
GTF2IP1-210ENST00000622829 TMCO3Q6UWJ1 677 aa21.49■■□□□ 1.03
GTF2IP1-210ENST00000622829 CROCC2H7BZ55 1655 aa21.49■■□□□ 1.03
GTF2IP1-210ENST00000622829 CSB-PGBD3P0DP91 1061 aa21.49■■□□□ 1.03
GTF2IP1-210ENST00000622829 A0A0D9SFI3 127 aa21.49■■□□□ 1.03
GTF2IP1-210ENST00000622829 RXRAP19793 462 aa21.49■■□□□ 1.03
GTF2IP1-210ENST00000622829 SLC39A6Q13433 755 aa21.49■■□□□ 1.03
GTF2IP1-210ENST00000622829 CFAP45Q9UL16 551 aa21.48■■□□□ 1.03
GTF2IP1-210ENST00000622829 IBSPP21815 317 aaPredicted RBP21.48■■□□□ 1.03
GTF2IP1-210ENST00000622829 PPARDQ03181 441 aa21.48■■□□□ 1.03
GTF2IP1-210ENST00000622829 NEXNQ0ZGT2 675 aa21.48■■□□□ 1.03
GTF2IP1-210ENST00000622829 TIGD1Q96MW7 591 aa21.48■■□□□ 1.03
GTF2IP1-210ENST00000622829 ARGLU1Q9NWB6 273 aaPredicted RBP21.48■■□□□ 1.03
GTF2IP1-210ENST00000622829 PAXBP1Q9Y5B6 917 aa21.47■■□□□ 1.03
GTF2IP1-210ENST00000622829 TTC21BQ7Z4L5 1316 aa21.47■■□□□ 1.03
GTF2IP1-210ENST00000622829 LRRC59Q96AG4 307 aaKnown RBP21.47■■□□□ 1.03
GTF2IP1-210ENST00000622829 NAT10Q9H0A0 1025 aaKnown RBP21.47■■□□□ 1.03
GTF2IP1-210ENST00000622829 SLC27A2O14975 620 aa21.47■■□□□ 1.03
GTF2IP1-210ENST00000622829 SEC31AO94979 1220 aaKnown RBP21.47■■□□□ 1.03
GTF2IP1-210ENST00000622829 SLU7O95391 586 aaKnown RBP21.47■■□□□ 1.03
GTF2IP1-210ENST00000622829 LMAN1P49257 510 aa21.47■■□□□ 1.03
GTF2IP1-210ENST00000622829 FBXO38Q6PIJ6 1188 aa21.47■■□□□ 1.03
GTF2IP1-210ENST00000622829 ZCCHC17Q9NP64 241 aaKnown RBP21.47■■□□□ 1.03
GTF2IP1-210ENST00000622829 CCDC171Q6TFL3 1326 aa21.46■■□□□ 1.03
GTF2IP1-210ENST00000622829 NPHP3Q7Z494 1330 aa21.46■■□□□ 1.03
GTF2IP1-210ENST00000622829 MCM6Q14566 821 aa21.46■■□□□ 1.03
GTF2IP1-210ENST00000622829 C10orf67Q8IYJ2 551 aa21.46■■□□□ 1.03
GTF2IP1-210ENST00000622829 KLHL10Q6JEL2 608 aa21.46■■□□□ 1.03
GTF2IP1-210ENST00000622829 NEK1Q96PY6 1258 aa21.46■■□□□ 1.03
GTF2IP1-210ENST00000622829 SBNO2Q9Y2G9 1366 aa21.46■■□□□ 1.03
GTF2IP1-210ENST00000622829 MYO5CQ9NQX4 1742 aa21.46■■□□□ 1.03
GTF2IP1-210ENST00000622829 GJB4Q9NTQ9 266 aa21.45■■□□□ 1.02
GTF2IP1-210ENST00000622829 RGS12O14924 1447 aa21.45■■□□□ 1.02
GTF2IP1-210ENST00000622829 PRAMEF22A3QJZ6 481 aa21.45■■□□□ 1.02
GTF2IP1-210ENST00000622829 GOLIM4O00461 696 aa21.45■■□□□ 1.02
GTF2IP1-210ENST00000622829 VPS53Q5VIR6 699 aa21.45■■□□□ 1.02
GTF2IP1-210ENST00000622829 ZNF397Q8NF99 534 aaPredicted RBP21.45■■□□□ 1.02
GTF2IP1-210ENST00000622829 KARSQ15046 597 aaKnown RBP21.44■■□□□ 1.02
GTF2IP1-210ENST00000622829 FEZ1Q99689 392 aa21.44■■□□□ 1.02
GTF2IP1-210ENST00000622829 ANKRD65E5RJM6 399 aa21.44■■□□□ 1.02
GTF2IP1-210ENST00000622829 UTP14AQ9BVJ6 771 aaKnown RBP21.44■■□□□ 1.02
GTF2IP1-210ENST00000622829 ANO10Q9NW15 660 aa21.44■■□□□ 1.02
GTF2IP1-210ENST00000622829 STX1AQ16623 288 aa21.44■■□□□ 1.02
GTF2IP1-210ENST00000622829 KMT5BQ4FZB7 885 aa21.44■■□□□ 1.02
GTF2IP1-210ENST00000622829 EVI5LQ96CN4 794 aa21.44■■□□□ 1.02
GTF2IP1-210ENST00000622829 RPAP1Q9BWH6 1393 aaPredicted RBP21.44■■□□□ 1.02
GTF2IP1-210ENST00000622829 PTCH1Q13635 1447 aa21.43■■□□□ 1.02
GTF2IP1-210ENST00000622829 CEBPAP49715 358 aaPredicted RBP21.43■■□□□ 1.02
GTF2IP1-210ENST00000622829 FAM193AP78312 1265 aa21.43■■□□□ 1.02
GTF2IP1-210ENST00000622829 TAF7LQ5H9L4 462 aa21.43■■□□□ 1.02
GTF2IP1-210ENST00000622829 SPECC1Q5M775 1068 aa21.43■■□□□ 1.02
GTF2IP1-210ENST00000622829 GNG11P61952 73 aa21.43■■□□□ 1.02
GTF2IP1-210ENST00000622829 ZNF589Q86UQ0 364 aaPredicted RBP21.43■■□□□ 1.02
GTF2IP1-210ENST00000622829 IL17REQ8NFR9 667 aa21.43■■□□□ 1.02
GTF2IP1-210ENST00000622829 MYD88Q99836 296 aa21.43■■□□□ 1.02
GTF2IP1-210ENST00000622829 RABEP2Q9H5N1 569 aa21.43■■□□□ 1.02
GTF2IP1-210ENST00000622829 ANKRD1Q15327 319 aa21.43■■□□□ 1.02
GTF2IP1-210ENST00000622829 CARD6Q9BX69 1037 aa21.43■■□□□ 1.02
GTF2IP1-210ENST00000622829 ABCC1P33527 1531 aa21.43■■□□□ 1.02
GTF2IP1-210ENST00000622829 LRRC8AQ8IWT6 810 aa21.42■■□□□ 1.02
GTF2IP1-210ENST00000622829 OSBPL3Q9H4L5 887 aa21.42■■□□□ 1.02
GTF2IP1-210ENST00000622829 TRPM2O94759 1503 aa21.42■■□□□ 1.02
GTF2IP1-210ENST00000622829 EAF2Q96CJ1 260 aaPredicted RBP21.42■■□□□ 1.02
GTF2IP1-210ENST00000622829 HINFPQ9BQA5 517 aa21.42■■□□□ 1.02
GTF2IP1-210ENST00000622829 NFXL1Q6ZNB6 911 aa21.41■■□□□ 1.02
GTF2IP1-210ENST00000622829 CLSTN2Q9H4D0 955 aa21.41■■□□□ 1.02
GTF2IP1-210ENST00000622829 UTP14CQ5TAP6 766 aaKnown RBP21.41■■□□□ 1.02
GTF2IP1-210ENST00000622829 USP28Q96RU2 1077 aa21.41■■□□□ 1.02
GTF2IP1-210ENST00000622829 CTNNA3Q9UI47 895 aa21.41■■□□□ 1.02
GTF2IP1-210ENST00000622829 PI4K2BQ8TCG2 481 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms