RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 GOLGB1Q14789 3259 aaKnown RBP25.11■■□□□ 1.61
PDLIM2-221ENST00000622702 CCT4P50991 539 aaKnown RBP25.11■■□□□ 1.61
PDLIM2-221ENST00000622702 TRIM28Q13263 835 aaKnown RBP25.11■■□□□ 1.61
PDLIM2-221ENST00000622702 MYD88Q99836 296 aa25.11■■□□□ 1.61
PDLIM2-221ENST00000622702 ISCA1Q9BUE6 129 aa25.11■■□□□ 1.61
PDLIM2-221ENST00000622702 N4BP2Q86UW6 1770 aaPredicted RBP25.1■■□□□ 1.61
PDLIM2-221ENST00000622702 C20orf194Q5TEA3 1177 aa25.1■■□□□ 1.61
PDLIM2-221ENST00000622702 PANK1Q8TE04 598 aa25.1■■□□□ 1.61
PDLIM2-221ENST00000622702 IBTKQ9P2D0 1353 aaPredicted RBP25.1■■□□□ 1.61
PDLIM2-221ENST00000622702 IGKV5-2P06315 115 aa25.09■■□□□ 1.61
PDLIM2-221ENST00000622702 ZNF34Q8IZ26 560 aa25.09■■□□□ 1.61
PDLIM2-221ENST00000622702 TMEM57Q8N5G2 664 aa25.09■■□□□ 1.61
PDLIM2-221ENST00000622702 SRCIN1Q9C0H9 1055 aa25.09■■□□□ 1.61
PDLIM2-221ENST00000622702 ANKRD36CQ5JPF3 1778 aa25.09■■□□□ 1.61
PDLIM2-221ENST00000622702 ALDH1L1O75891 902 aa25.09■■□□□ 1.61
PDLIM2-221ENST00000622702 ATP5J2-PTCD1G3V325 749 aa25.08■■□□□ 1.6
PDLIM2-221ENST00000622702 NEURL1BA8MQ27 555 aa25.07■■□□□ 1.6
PDLIM2-221ENST00000622702 GPTP24298 496 aa25.07■■□□□ 1.6
PDLIM2-221ENST00000622702 CCDC191Q8NCU4 936 aa25.07■■□□□ 1.6
PDLIM2-221ENST00000622702 FAM177BA6PVY3 158 aa25.06■■□□□ 1.6
PDLIM2-221ENST00000622702 NPHP1O15259 732 aa25.06■■□□□ 1.6
PDLIM2-221ENST00000622702 TGFB2P61812 414 aa25.06■■□□□ 1.6
PDLIM2-221ENST00000622702 CWF19L2Q2TBE0 894 aaKnown RBP25.06■■□□□ 1.6
PDLIM2-221ENST00000622702 PRR5LQ6MZQ0 368 aa25.06■■□□□ 1.6
PDLIM2-221ENST00000622702 NBPF5PQ86XG9 351 aaPredicted RBP25.06■■□□□ 1.6
PDLIM2-221ENST00000622702 KIAA1551Q9HCM1 1747 aa25.05■■□□□ 1.6
PDLIM2-221ENST00000622702 PARP10Q53GL7 1025 aa25.05■■□□□ 1.6
PDLIM2-221ENST00000622702 NLRP10Q86W26 655 aa25.05■■□□□ 1.6
PDLIM2-221ENST00000622702 CCDC24Q8N4L8 307 aa25.05■■□□□ 1.6
PDLIM2-221ENST00000622702 CNBD1Q8NA66 436 aa25.05■■□□□ 1.6
PDLIM2-221ENST00000622702 UBN2Q6ZU65 1347 aa25.05■■□□□ 1.6
PDLIM2-221ENST00000622702 A0A0G2JLW4 131 aa25.04■■□□□ 1.6
PDLIM2-221ENST00000622702 MVPQ14764 893 aaKnown RBP25.04■■□□□ 1.6
PDLIM2-221ENST00000622702 CWC25Q9NXE8 425 aaPredicted RBP25.04■■□□□ 1.6
PDLIM2-221ENST00000622702 DCAF8L1A6NGE4 600 aa25.03■■□□□ 1.6
PDLIM2-221ENST00000622702 GCKRQ14397 625 aa25.03■■□□□ 1.6
PDLIM2-221ENST00000622702 ITPRIPQ8IWB1 547 aa25.03■■□□□ 1.6
PDLIM2-221ENST00000622702 COG6Q9Y2V7 657 aa25.03■■□□□ 1.6
PDLIM2-221ENST00000622702 UTRNP46939 3433 aa25.03■■□□□ 1.6
PDLIM2-221ENST00000622702 TPTE2Q6XPS3 522 aa25.02■■□□□ 1.6
PDLIM2-221ENST00000622702 PELP1Q8IZL8 1130 aaKnown RBP25.02■■□□□ 1.6
PDLIM2-221ENST00000622702 DPEP1P16444 411 aa25.02■■□□□ 1.6
PDLIM2-221ENST00000622702 ST5P78524 1137 aa25.02■■□□□ 1.6
PDLIM2-221ENST00000622702 WWC3Q9ULE0 1092 aa25.02■■□□□ 1.6
PDLIM2-221ENST00000622702 DDX19BQ9UMR2 479 aa25.01■■□□□ 1.59
PDLIM2-221ENST00000622702 ANKRD31Q8N7Z5 1873 aa25■■□□□ 1.59
PDLIM2-221ENST00000622702 CHRNA5P30532 468 aa25■■□□□ 1.59
PDLIM2-221ENST00000622702 GPR162Q16538 588 aa25■■□□□ 1.59
PDLIM2-221ENST00000622702 SUSD4Q5VX71 490 aa25■■□□□ 1.59
PDLIM2-221ENST00000622702 BRIP1Q9BX63 1249 aa25■■□□□ 1.59
PDLIM2-221ENST00000622702 NYXQ9GZU5 481 aa25■■□□□ 1.59
PDLIM2-221ENST00000622702 GTF2E1P29083 439 aaPredicted RBP24.99■■□□□ 1.59
PDLIM2-221ENST00000622702 PPP1R42Q7Z4L9 355 aa24.99■■□□□ 1.59
PDLIM2-221ENST00000622702 USP44Q9H0E7 712 aa24.99■■□□□ 1.59
PDLIM2-221ENST00000622702 UTYO14607 1347 aa24.99■■□□□ 1.59
PDLIM2-221ENST00000622702 GRM8O00222 908 aa24.98■■□□□ 1.59
PDLIM2-221ENST00000622702 ZBTB7BO15156 539 aaPredicted RBP24.98■■□□□ 1.59
PDLIM2-221ENST00000622702 KCNA3P22001 575 aa24.98■■□□□ 1.59
PDLIM2-221ENST00000622702 NTSR2O95665 410 aa24.97■■□□□ 1.59
PDLIM2-221ENST00000622702 PCCAP05165 728 aaPredicted RBP24.97■■□□□ 1.59
PDLIM2-221ENST00000622702 PDE6BP35913 854 aa24.97■■□□□ 1.59
PDLIM2-221ENST00000622702 ZBTB38Q8NAP3 1195 aaPredicted RBP24.97■■□□□ 1.59
PDLIM2-221ENST00000622702 CRBNQ96SW2 442 aa24.97■■□□□ 1.59
PDLIM2-221ENST00000622702 UTP14AQ9BVJ6 771 aaKnown RBP24.97■■□□□ 1.59
PDLIM2-221ENST00000622702 C9orf78Q9NZ63 289 aaPredicted RBP24.97■■□□□ 1.59
PDLIM2-221ENST00000622702 H7C1W4 665 aa24.96■■□□□ 1.59
PDLIM2-221ENST00000622702 NUTM1Q86Y26 1132 aa24.96■■□□□ 1.59
PDLIM2-221ENST00000622702 C2CD5Q86YS7 1000 aa24.96■■□□□ 1.59
PDLIM2-221ENST00000622702 MEIS3Q99687 375 aa24.96■■□□□ 1.59
PDLIM2-221ENST00000622702 CHMP4BQ9H444 224 aaKnown RBP24.96■■□□□ 1.59
PDLIM2-221ENST00000622702 H0YIN7 160 aa24.96■■□□□ 1.59
PDLIM2-221ENST00000622702 YBX3P16989 372 aaKnown RBP eCLIP24.96■■□□□ 1.59
PDLIM2-221ENST00000622702 ERFEQ4G0M1 354 aa24.96■■□□□ 1.59
PDLIM2-221ENST00000622702 TRMT112Q9UI30 125 aaKnown RBP24.96■■□□□ 1.59
PDLIM2-221ENST00000622702 GNAI3P08754 354 aa24.95■■□□□ 1.58
PDLIM2-221ENST00000622702 NBPF7P0C2Y1 421 aaPredicted RBP24.95■■□□□ 1.58
PDLIM2-221ENST00000622702 CASP7P55210 303 aa24.95■■□□□ 1.58
PDLIM2-221ENST00000622702 IRX6P78412 446 aaPredicted RBP24.95■■□□□ 1.58
PDLIM2-221ENST00000622702 PIM2Q9P1W9 311 aa24.95■■□□□ 1.58
PDLIM2-221ENST00000622702 BRCA1P38398 1863 aaKnown RBP24.95■■□□□ 1.58
PDLIM2-221ENST00000622702 SH3TC1Q8TE82 1336 aa24.94■■□□□ 1.58
PDLIM2-221ENST00000622702 NEFLP07196 543 aa24.93■■□□□ 1.58
PDLIM2-221ENST00000622702 UBE3BQ7Z3V4 1068 aa24.93■■□□□ 1.58
PDLIM2-221ENST00000622702 FAM89AQ96GI7 184 aa24.93■■□□□ 1.58
PDLIM2-221ENST00000622702 ZBTB40Q9NUA8 1239 aa24.93■■□□□ 1.58
PDLIM2-221ENST00000622702 PDZRN3Q9UPQ7 1066 aa24.93■■□□□ 1.58
PDLIM2-221ENST00000622702 CDHR2Q9BYE9 1310 aa24.93■■□□□ 1.58
PDLIM2-221ENST00000622702 ABCC12Q96J65 1359 aa24.93■■□□□ 1.58
PDLIM2-221ENST00000622702 DLEC1Q9Y238 1755 aa24.92■■□□□ 1.58
PDLIM2-221ENST00000622702 UBTFL1P0CB47 393 aaPredicted RBP24.92■■□□□ 1.58
PDLIM2-221ENST00000622702 BCS1LQ9Y276 419 aa24.92■■□□□ 1.58
PDLIM2-221ENST00000622702 COL11A2P13942 1736 aaPredicted RBP24.92■■□□□ 1.58
PDLIM2-221ENST00000622702 HDAC5Q9UQL6 1122 aa24.91■■□□□ 1.58
PDLIM2-221ENST00000622702 EXOC6Q8TAG9 804 aa24.9■■□□□ 1.58
PDLIM2-221ENST00000622702 JARID2Q92833 1246 aaPredicted RBP24.9■■□□□ 1.58
PDLIM2-221ENST00000622702 AAMPQ13685 434 aa24.89■■□□□ 1.58
PDLIM2-221ENST00000622702 DALRD3Q5D0E6 543 aaKnown RBP24.89■■□□□ 1.58
PDLIM2-221ENST00000622702 RTL5Q5HYW3 569 aaPredicted RBP24.89■■□□□ 1.58
PDLIM2-221ENST00000622702 SLC10A5Q5PT55 438 aa24.89■■□□□ 1.58
PDLIM2-221ENST00000622702 SYNE4Q8N205 404 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms