RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 GLI2P10070 1586 aa15.11■□□□□ 0.01
MSH6-215ENST00000622629 UBE2Q2Q8WVN8 375 aa15.11■□□□□ 0.01
MSH6-215ENST00000622629 MTMR7Q9Y216 660 aa15.11■□□□□ 0.01
MSH6-215ENST00000622629 KIF24Q5T7B8 1368 aa15.11■□□□□ 0.01
MSH6-215ENST00000622629 UBAP1LF5GYI3 381 aa15.11■□□□□ 0.01
MSH6-215ENST00000622629 RRP9O43818 475 aaKnown RBP15.11■□□□□ 0.01
MSH6-215ENST00000622629 EIF4A1P60842 406 aaKnown RBP15.11■□□□□ 0.01
MSH6-215ENST00000622629 CREB3L3Q68CJ9 461 aa15.11■□□□□ 0.01
MSH6-215ENST00000622629 UNC5CLQ8IV45 518 aa15.11■□□□□ 0.01
MSH6-215ENST00000622629 MPHOSPH8Q99549 860 aa15.11■□□□□ 0.01
MSH6-215ENST00000622629 HOOK1Q9UJC3 728 aaKnown RBP15.11■□□□□ 0.01
MSH6-215ENST00000622629 SNX14Q9Y5W7 946 aa15.11■□□□□ 0.01
MSH6-215ENST00000622629 SART3Q15020 963 aaKnown RBP15.1■□□□□ 0.01
MSH6-215ENST00000622629 PDILTQ8N807 584 aa15.1■□□□□ 0.01
MSH6-215ENST00000622629 DDX21Q9NR30 783 aaKnown RBP eCLIP15.1■□□□□ 0.01
MSH6-215ENST00000622629 FAM173BQ6P4H8 233 aa15.1■□□□□ 0.01
MSH6-215ENST00000622629 OLFM4Q6UX06 510 aa15.1■□□□□ 0.01
MSH6-215ENST00000622629 TTC12Q9H892 705 aaPredicted RBP15.1■□□□□ 0.01
MSH6-215ENST00000622629 ARHGEF10O15013 1369 aa15.09■□□□□ 0.01
MSH6-215ENST00000622629 ADGRB3O60242 1522 aa15.09■□□□□ 0.01
MSH6-215ENST00000622629 FAM227BQ96M60 508 aa15.09■□□□□ 0.01
MSH6-215ENST00000622629 CWC25Q9NXE8 425 aaPredicted RBP15.09■□□□□ 0.01
MSH6-215ENST00000622629 TMEM63CQ9P1W3 806 aa15.09■□□□□ 0.01
MSH6-215ENST00000622629 KIDINS220Q9ULH0 1771 aa15.09■□□□□ 0.01
MSH6-215ENST00000622629 IFIT5Q13325 482 aaKnown RBP15.09■□□□□ 0.01
MSH6-215ENST00000622629 CEP57L1Q8IYX8 460 aa15.09■□□□□ 0.01
MSH6-215ENST00000622629 TMOD3Q9NYL9 352 aa15.09■□□□□ 0.01
MSH6-215ENST00000622629 SSH3Q8TE77 659 aa15.08■□□□□ 0.01
MSH6-215ENST00000622629 NUP133Q8WUM0 1156 aa15.08■□□□□ 0
MSH6-215ENST00000622629 NDUFB9Q9Y6M9 179 aa15.08■□□□□ 0
MSH6-215ENST00000622629 CCDC171Q6TFL3 1326 aa15.08■□□□□ 0
MSH6-215ENST00000622629 ARHGAP31Q2M1Z3 1444 aa15.08■□□□□ 0
MSH6-215ENST00000622629 TULP4Q9NRJ4 1543 aa15.08■□□□□ 0
MSH6-215ENST00000622629 ZNF165P49910 485 aa15.08■□□□□ 0
MSH6-215ENST00000622629 MTERF4Q7Z6M4 381 aaKnown RBP15.08■□□□□ 0
MSH6-215ENST00000622629 DACT1Q9NYF0 836 aa15.08■□□□□ 0
MSH6-215ENST00000622629 HMG20BQ9P0W2 317 aa15.08■□□□□ 0
MSH6-215ENST00000622629 ZKSCAN5Q9Y2L8 839 aa15.08■□□□□ 0
MSH6-215ENST00000622629 GADD45BO75293 160 aaPredicted RBP15.08■□□□□ 0
MSH6-215ENST00000622629 CCDC82Q8N4S0 544 aa15.08■□□□□ 0
MSH6-215ENST00000622629 RAD50Q92878 1312 aa15.07■□□□□ 0
MSH6-215ENST00000622629 STARD3NLO95772 234 aa15.07■□□□□ 0
MSH6-215ENST00000622629 C8orf76Q96K31 380 aa15.07■□□□□ 0
MSH6-215ENST00000622629 BABAM1Q9NWV8 329 aa15.07■□□□□ 0
MSH6-215ENST00000622629 HMGB1P09429 215 aaKnown RBP15.07■□□□□ 0
MSH6-215ENST00000622629 AKAP2Q9Y2D5 859 aa15.07■□□□□ 0
MSH6-215ENST00000622629 CEP152O94986 1710 aa15.07■□□□□ 0
MSH6-215ENST00000622629 TFCP2Q12800 502 aa15.07■□□□□ 0
MSH6-215ENST00000622629 JMYQ8N9B5 988 aa15.07■□□□□ 0
MSH6-215ENST00000622629 SUCLG2Q96I99 432 aa15.07■□□□□ 0
MSH6-215ENST00000622629 QRICH2Q9H0J4 1663 aa15.07■□□□□ 0
MSH6-215ENST00000622629 INO80Q9ULG1 1556 aaPredicted RBP15.07■□□□□ 0
MSH6-215ENST00000622629 PNPLA6Q8IY17 1366 aa15.06■□□□□ 0
MSH6-215ENST00000622629 HSPA4P34932 840 aa15.06■□□□□ 0
MSH6-215ENST00000622629 ZNF445P59923 1031 aa15.06■□□□□ 0
MSH6-215ENST00000622629 ZNF790Q6PG37 636 aa15.06■□□□□ 0
MSH6-215ENST00000622629 Q6ZUG5 572 aa15.06■□□□□ 0
MSH6-215ENST00000622629 CHST3Q7LGC8 479 aa15.06■□□□□ 0
MSH6-215ENST00000622629 DDX19AQ9NUU7 478 aaKnown RBP15.06■□□□□ 0
MSH6-215ENST00000622629 FSD2A1L4K1 749 aa15.06■□□□□ 0
MSH6-215ENST00000622629 SERPINC1P01008 464 aa15.06■□□□□ 0
MSH6-215ENST00000622629 VPS53Q5VIR6 699 aa15.06■□□□□ 0
MSH6-215ENST00000622629 POLR3DP05423 398 aaPredicted RBP15.06■□□□□ 0
MSH6-215ENST00000622629 ZSCAN25Q6NSZ9 544 aa15.06■□□□□ 0
MSH6-215ENST00000622629 LDHAL6AQ6ZMR3 332 aa15.06■□□□□ 0
MSH6-215ENST00000622629 RUFY3Q7L099 469 aa15.06■□□□□ 0
MSH6-215ENST00000622629 AIDAQ96BJ3 306 aa15.06■□□□□ 0
MSH6-215ENST00000622629 PTCH1Q13635 1447 aa15.06■□□□□ 0
MSH6-215ENST00000622629 TPM1P09493 284 aa15.06■□□□□ 0
MSH6-215ENST00000622629 TDO2P48775 406 aa15.06■□□□□ 0
MSH6-215ENST00000622629 FSIP1Q8NA03 581 aa15.06■□□□□ 0
MSH6-215ENST00000622629 CCDC112Q8NEF3 446 aa15.06■□□□□ 0
MSH6-215ENST00000622629 EDC3Q96F86 508 aaKnown RBP15.06■□□□□ 0
MSH6-215ENST00000622629 PPRC1Q5VV67 1664 aaKnown RBP15.05■□□□□ 0
MSH6-215ENST00000622629 GOLGA8BA8MQT2 603 aa15.05■□□□□ 0
MSH6-215ENST00000622629 BRD1O95696 1058 aa15.05■□□□□ 0
MSH6-215ENST00000622629 HOXB7P09629 217 aa15.05■□□□□ 0
MSH6-215ENST00000622629 ABCF2Q9UG63 623 aa15.05■□□□□ 0
MSH6-215ENST00000622629 CCDC69A6NI79 296 aa15.05■□□□□ -0
MSH6-215ENST00000622629 ZNF213O14771 459 aa15.05■□□□□ -0
MSH6-215ENST00000622629 MCMDC2Q4G0Z9 681 aa15.05■□□□□ -0
MSH6-215ENST00000622629 IGSF1Q8N6C5 1336 aa15.05■□□□□ -0
MSH6-215ENST00000622629 USP6P35125 1406 aa15.05■□□□□ -0
MSH6-215ENST00000622629 MARCH6O60337 910 aa15.05■□□□□ -0
MSH6-215ENST00000622629 HOMEZQ8IX15 550 aa15.05■□□□□ -0
MSH6-215ENST00000622629 TRIM22Q8IYM9 498 aa15.05■□□□□ -0
MSH6-215ENST00000622629 MNS1Q8NEH6 495 aa15.05■□□□□ -0
MSH6-215ENST00000622629 CDK12Q9NYV4 1490 aaPredicted RBP15.04■□□□□ -0
MSH6-215ENST00000622629 MCM5P33992 734 aa15.04■□□□□ -0
MSH6-215ENST00000622629 TIMM10P62072 90 aa15.04■□□□□ -0
MSH6-215ENST00000622629 UVSSAQ2YD98 709 aa15.04■□□□□ -0
MSH6-215ENST00000622629 CCDC129Q6ZRS4 1044 aa15.04■□□□□ -0
MSH6-215ENST00000622629 TRMT112Q9UI30 125 aaKnown RBP15.04■□□□□ -0
MSH6-215ENST00000622629 BIN1O00499 593 aa15.04■□□□□ -0
MSH6-215ENST00000622629 NACAP1Q9BZK3 213 aa15.04■□□□□ -0
MSH6-215ENST00000622629 IBTKQ9P2D0 1353 aaPredicted RBP15.04■□□□□ -0
MSH6-215ENST00000622629 XBP1P17861 261 aa15.04■□□□□ -0
MSH6-215ENST00000622629 LRP2BPQ9P2M1 347 aa15.04■□□□□ -0
MSH6-215ENST00000622629 USP16Q9Y5T5 823 aa15.04■□□□□ -0
MSH6-215ENST00000622629 A2ML1A8K2U0 1454 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms