RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 WWC1Q8IX03 1113 aa23.29■■□□□ 1.32
SCAMP4-213ENST00000621748 UTP14AQ9BVJ6 771 aaKnown RBP23.29■■□□□ 1.32
SCAMP4-213ENST00000621748 TAOK3Q9H2K8 898 aa23.29■■□□□ 1.32
SCAMP4-213ENST00000621748 DICER1Q9UPY3 1922 aaKnown RBP23.29■■□□□ 1.32
SCAMP4-213ENST00000621748 LTBP3Q9NS15 1303 aa23.29■■□□□ 1.32
SCAMP4-213ENST00000621748 ZC3H4Q9UPT8 1303 aaKnown RBP23.29■■□□□ 1.32
SCAMP4-213ENST00000621748 DIEXFQ68CQ4 756 aaKnown RBP23.28■■□□□ 1.32
SCAMP4-213ENST00000621748 C3orf67Q6ZVT6 689 aa23.28■■□□□ 1.32
SCAMP4-213ENST00000621748 NLRP10Q86W26 655 aa23.28■■□□□ 1.32
SCAMP4-213ENST00000621748 HYPKQ9NX55 129 aa23.28■■□□□ 1.32
SCAMP4-213ENST00000621748 KDM2BQ8NHM5 1336 aa23.28■■□□□ 1.32
SCAMP4-213ENST00000621748 TIAM2Q8IVF5 1701 aa23.28■■□□□ 1.32
SCAMP4-213ENST00000621748 ANKRD13DQ6ZTN6 518 aa23.27■■□□□ 1.32
SCAMP4-213ENST00000621748 PLBD2Q8NHP8 589 aa23.27■■□□□ 1.32
SCAMP4-213ENST00000621748 HOXA10P31260 410 aaPredicted RBP23.26■■□□□ 1.31
SCAMP4-213ENST00000621748 CCDC93Q567U6 631 aa23.26■■□□□ 1.31
SCAMP4-213ENST00000621748 SLC10A5Q5PT55 438 aa23.26■■□□□ 1.31
SCAMP4-213ENST00000621748 RRAGCQ9HB90 399 aa23.26■■□□□ 1.31
SCAMP4-213ENST00000621748 GLTPD2A6NH11 291 aa23.25■■□□□ 1.31
SCAMP4-213ENST00000621748 SYNE4Q8N205 404 aa23.25■■□□□ 1.31
SCAMP4-213ENST00000621748 RPGRQ92834 1020 aaKnown RBP23.25■■□□□ 1.31
SCAMP4-213ENST00000621748 TSR2Q969E8 191 aaKnown RBP23.25■■□□□ 1.31
SCAMP4-213ENST00000621748 TOMM70O94826 608 aa23.24■■□□□ 1.31
SCAMP4-213ENST00000621748 TSPYL6Q8N831 410 aa23.24■■□□□ 1.31
SCAMP4-213ENST00000621748 ZNF428Q96B54 188 aa23.24■■□□□ 1.31
SCAMP4-213ENST00000621748 NLRP3Q96P20 1036 aa23.24■■□□□ 1.31
SCAMP4-213ENST00000621748 NCBP3Q53F19 620 aaKnown RBP23.23■■□□□ 1.31
SCAMP4-213ENST00000621748 PHAXQ9H814 394 aaKnown RBP23.23■■□□□ 1.31
SCAMP4-213ENST00000621748 FKBP4Q02790 459 aaKnown RBP eCLIP23.22■■□□□ 1.31
SCAMP4-213ENST00000621748 RBM17Q96I25 401 aaKnown RBP23.22■■□□□ 1.31
SCAMP4-213ENST00000621748 CRAMP1Q96RY5 1269 aa23.22■■□□□ 1.31
SCAMP4-213ENST00000621748 ISCA1Q9BUE6 129 aa23.22■■□□□ 1.31
SCAMP4-213ENST00000621748 TRMT112Q9UI30 125 aaKnown RBP23.22■■□□□ 1.31
SCAMP4-213ENST00000621748 SALL2Q9Y467 1007 aaPredicted RBP23.22■■□□□ 1.31
SCAMP4-213ENST00000621748 RNF123Q5XPI4 1314 aa23.22■■□□□ 1.31
SCAMP4-213ENST00000621748 CEP350Q5VT06 3117 aa23.22■■□□□ 1.31
SCAMP4-213ENST00000621748 ATP5J2-PTCD1G3V325 749 aa23.21■■□□□ 1.31
SCAMP4-213ENST00000621748 HCLS1P14317 486 aaPredicted RBP23.21■■□□□ 1.31
SCAMP4-213ENST00000621748 RTKN2Q8IZC4 609 aa23.21■■□□□ 1.31
SCAMP4-213ENST00000621748 LAMB2P55268 1798 aa23.2■■□□□ 1.3
SCAMP4-213ENST00000621748 SNED1Q8TER0 1413 aa23.2■■□□□ 1.3
SCAMP4-213ENST00000621748 SLC51AQ86UW1 340 aa23.2■■□□□ 1.3
SCAMP4-213ENST00000621748 FAM9BQ8IZU0 186 aa23.2■■□□□ 1.3
SCAMP4-213ENST00000621748 ZNF277Q9NRM2 450 aaPredicted RBP23.2■■□□□ 1.3
SCAMP4-213ENST00000621748 IL16Q14005 1332 aa23.19■■□□□ 1.3
SCAMP4-213ENST00000621748 SH3TC1Q8TE82 1336 aa23.19■■□□□ 1.3
SCAMP4-213ENST00000621748 HSPA6P17066 643 aa23.19■■□□□ 1.3
SCAMP4-213ENST00000621748 CCDC30Q5VVM6 783 aa23.19■■□□□ 1.3
SCAMP4-213ENST00000621748 TCERG1O14776 1098 aaKnown RBP23.18■■□□□ 1.3
SCAMP4-213ENST00000621748 DPY19L2Q6NUT2 758 aa23.18■■□□□ 1.3
SCAMP4-213ENST00000621748 RIC3Q7Z5B4 369 aa23.18■■□□□ 1.3
SCAMP4-213ENST00000621748 C16orf71Q8IYS4 520 aaPredicted RBP23.18■■□□□ 1.3
SCAMP4-213ENST00000621748 POTECB2RU33 542 aa23.17■■□□□ 1.3
SCAMP4-213ENST00000621748 GOLGA2Q08379 1002 aa23.17■■□□□ 1.3
SCAMP4-213ENST00000621748 RBM46Q8TBY0 533 aaKnown RBP23.17■■□□□ 1.3
SCAMP4-213ENST00000621748 PPEF1O14829 653 aaPredicted RBP23.16■■□□□ 1.3
SCAMP4-213ENST00000621748 VEGFAP15692 232 aaPredicted RBP23.16■■□□□ 1.3
SCAMP4-213ENST00000621748 TRIM28Q13263 835 aaKnown RBP23.16■■□□□ 1.3
SCAMP4-213ENST00000621748 CC2D2BQ6DHV5 1058 aa23.16■■□□□ 1.3
SCAMP4-213ENST00000621748 FAM89AQ96GI7 184 aa23.16■■□□□ 1.3
SCAMP4-213ENST00000621748 CHMP4AQ9BY43 222 aa23.16■■□□□ 1.3
SCAMP4-213ENST00000621748 ABCC4O15439 1325 aa23.15■■□□□ 1.3
SCAMP4-213ENST00000621748 TWISTNBQ3B726 338 aaPredicted RBP23.15■■□□□ 1.3
SCAMP4-213ENST00000621748 WDR63Q8IWG1 891 aa23.15■■□□□ 1.3
SCAMP4-213ENST00000621748 PSMD1Q99460 953 aa23.15■■□□□ 1.3
SCAMP4-213ENST00000621748 TAF1P21675 1872 aa23.15■■□□□ 1.3
SCAMP4-213ENST00000621748 DDX60Q8IY21 1712 aaKnown RBP23.14■■□□□ 1.3
SCAMP4-213ENST00000621748 WDR90Q96KV7 1748 aa23.14■■□□□ 1.3
SCAMP4-213ENST00000621748 DDNO94850 711 aaPredicted RBP23.14■■□□□ 1.29
SCAMP4-213ENST00000621748 IARSP41252 1262 aaKnown RBP23.14■■□□□ 1.29
SCAMP4-213ENST00000621748 RTL5Q5HYW3 569 aaPredicted RBP23.14■■□□□ 1.29
SCAMP4-213ENST00000621748 MYD88Q99836 296 aa23.13■■□□□ 1.29
SCAMP4-213ENST00000621748 FANCIQ9NVI1 1328 aa23.12■■□□□ 1.29
SCAMP4-213ENST00000621748 ATP6V0A2Q9Y487 856 aa23.12■■□□□ 1.29
SCAMP4-213ENST00000621748 BBOX1O75936 387 aa23.11■■□□□ 1.29
SCAMP4-213ENST00000621748 GRIPAP1Q4V328 841 aa23.11■■□□□ 1.29
SCAMP4-213ENST00000621748 DDX46Q7L014 1031 aaKnown RBP23.11■■□□□ 1.29
SCAMP4-213ENST00000621748 SPINK5Q9NQ38 1064 aaPredicted RBP23.11■■□□□ 1.29
SCAMP4-213ENST00000621748 DDX58O95786 925 aaKnown RBP23.1■■□□□ 1.29
SCAMP4-213ENST00000621748 FSTL1Q12841 308 aa23.1■■□□□ 1.29
SCAMP4-213ENST00000621748 METTL22Q9BUU2 404 aaPredicted RBP23.1■■□□□ 1.29
SCAMP4-213ENST00000621748 STK31Q9BXU1 1019 aa23.1■■□□□ 1.29
SCAMP4-213ENST00000621748 ZNF541Q9H0D2 1346 aa23.09■■□□□ 1.29
SCAMP4-213ENST00000621748 GRAPQ13588 217 aa23.09■■□□□ 1.29
SCAMP4-213ENST00000621748 SF3B3Q15393 1217 aaKnown RBP23.09■■□□□ 1.29
SCAMP4-213ENST00000621748 G2E3Q7L622 706 aa23.09■■□□□ 1.29
SCAMP4-213ENST00000621748 GRAPLQ8TC17 118 aaPredicted RBP23.09■■□□□ 1.29
SCAMP4-213ENST00000621748 MAP3K2Q9Y2U5 619 aa23.09■■□□□ 1.29
SCAMP4-213ENST00000621748 COL4A5P29400 1685 aa23.09■■□□□ 1.29
SCAMP4-213ENST00000621748 PI4KAP2A4QPH2 592 aa23.08■■□□□ 1.29
SCAMP4-213ENST00000621748 FZD9O00144 591 aa23.08■■□□□ 1.29
SCAMP4-213ENST00000621748 IRS4O14654 1257 aaPredicted RBP23.08■■□□□ 1.29
SCAMP4-213ENST00000621748 SLC4A2P04920 1241 aa23.08■■□□□ 1.29
SCAMP4-213ENST00000621748 KSR2Q6VAB6 950 aa23.08■■□□□ 1.29
SCAMP4-213ENST00000621748 SP8Q8IXZ3 490 aa23.08■■□□□ 1.29
SCAMP4-213ENST00000621748 PI4KAP1Q8N8J0 262 aa23.08■■□□□ 1.29
SCAMP4-213ENST00000621748 ZBTB38Q8NAP3 1195 aaPredicted RBP23.08■■□□□ 1.29
SCAMP4-213ENST00000621748 CCDC191Q8NCU4 936 aa23.08■■□□□ 1.29
SCAMP4-213ENST00000621748 VAMP4O75379 141 aa23.07■■□□□ 1.28
SCAMP4-213ENST00000621748 EXOSC9Q06265 439 aaKnown RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms