RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 CACNA1FO60840 1977 aa23.63■■□□□ 1.37
CIRBP-245ENST00000621399 AFDNP55196 1824 aaKnown RBP23.63■■□□□ 1.37
CIRBP-245ENST00000621399 RNF123Q5XPI4 1314 aa23.62■■□□□ 1.37
CIRBP-245ENST00000621399 IGKV5-2P06315 115 aa23.62■■□□□ 1.37
CIRBP-245ENST00000621399 DPEP1P16444 411 aa23.62■■□□□ 1.37
CIRBP-245ENST00000621399 BRPF1P55201 1214 aaPredicted RBP23.62■■□□□ 1.37
CIRBP-245ENST00000621399 SH3TC1Q8TE82 1336 aa23.61■■□□□ 1.37
CIRBP-245ENST00000621399 BCAR3O75815 825 aa23.61■■□□□ 1.37
CIRBP-245ENST00000621399 CHRNA5P30532 468 aa23.61■■□□□ 1.37
CIRBP-245ENST00000621399 CWF19L2Q2TBE0 894 aaKnown RBP23.61■■□□□ 1.37
CIRBP-245ENST00000621399 SLC4A10Q6U841 1118 aa23.61■■□□□ 1.37
CIRBP-245ENST00000621399 C2CD5Q86YS7 1000 aa23.61■■□□□ 1.37
CIRBP-245ENST00000621399 LINS1Q8NG48 757 aa23.61■■□□□ 1.37
CIRBP-245ENST00000621399 PXDNLA1KZ92 1463 aa23.61■■□□□ 1.37
CIRBP-245ENST00000621399 NEURL1BA8MQ27 555 aa23.6■■□□□ 1.37
CIRBP-245ENST00000621399 H0YIN7 160 aa23.6■■□□□ 1.37
CIRBP-245ENST00000621399 FAM89AQ96GI7 184 aa23.6■■□□□ 1.37
CIRBP-245ENST00000621399 ABCC12Q96J65 1359 aa23.6■■□□□ 1.37
CIRBP-245ENST00000621399 ANKRD36CQ5JPF3 1778 aa23.6■■□□□ 1.37
CIRBP-245ENST00000621399 KIF16BQ96L93 1317 aa23.59■■□□□ 1.37
CIRBP-245ENST00000621399 RTL5Q5HYW3 569 aaPredicted RBP23.59■■□□□ 1.37
CIRBP-245ENST00000621399 PDZRN3Q9UPQ7 1066 aa23.59■■□□□ 1.37
CIRBP-245ENST00000621399 SLC10A5Q5PT55 438 aa23.58■■□□□ 1.37
CIRBP-245ENST00000621399 BEND3Q5T5X7 828 aa23.58■■□□□ 1.37
CIRBP-245ENST00000621399 SYNE4Q8N205 404 aa23.58■■□□□ 1.37
CIRBP-245ENST00000621399 ZBTB38Q8NAP3 1195 aaPredicted RBP23.58■■□□□ 1.37
CIRBP-245ENST00000621399 WWC3Q9ULE0 1092 aa23.58■■□□□ 1.37
CIRBP-245ENST00000621399 KIF13BQ9NQT8 1826 aa23.58■■□□□ 1.37
CIRBP-245ENST00000621399 KCNA3P22001 575 aa23.57■■□□□ 1.36
CIRBP-245ENST00000621399 PELP1Q8IZL8 1130 aaKnown RBP23.57■■□□□ 1.36
CIRBP-245ENST00000621399 FRAT1Q92837 279 aaPredicted RBP23.57■■□□□ 1.36
CIRBP-245ENST00000621399 API5Q9BZZ5 524 aaKnown RBP23.57■■□□□ 1.36
CIRBP-245ENST00000621399 IPO8O15397 1037 aaKnown RBP23.56■■□□□ 1.36
CIRBP-245ENST00000621399 PCCAP05165 728 aaPredicted RBP23.56■■□□□ 1.36
CIRBP-245ENST00000621399 HCLS1P14317 486 aaPredicted RBP23.56■■□□□ 1.36
CIRBP-245ENST00000621399 GCKRQ14397 625 aa23.56■■□□□ 1.36
CIRBP-245ENST00000621399 NLRP3Q96P20 1036 aa23.56■■□□□ 1.36
CIRBP-245ENST00000621399 SRCIN1Q9C0H9 1055 aa23.56■■□□□ 1.36
CIRBP-245ENST00000621399 PIM2Q9P1W9 311 aa23.56■■□□□ 1.36
CIRBP-245ENST00000621399 KLRG2A4D1S0 409 aaPredicted RBP23.55■■□□□ 1.36
CIRBP-245ENST00000621399 DCAF8L1A6NGE4 600 aa23.55■■□□□ 1.36
CIRBP-245ENST00000621399 ARHGAP45Q92619 1136 aa23.55■■□□□ 1.36
CIRBP-245ENST00000621399 JARID2Q92833 1246 aaPredicted RBP23.55■■□□□ 1.36
CIRBP-245ENST00000621399 ZNF622Q969S3 477 aaKnown RBP eCLIP23.55■■□□□ 1.36
CIRBP-245ENST00000621399 IRS4O14654 1257 aaPredicted RBP23.54■■□□□ 1.36
CIRBP-245ENST00000621399 SRGNP10124 158 aa23.54■■□□□ 1.36
CIRBP-245ENST00000621399 GPR162Q16538 588 aa23.54■■□□□ 1.36
CIRBP-245ENST00000621399 RIC1Q4ADV7 1423 aa23.53■■□□□ 1.36
CIRBP-245ENST00000621399 ALDH1L1O75891 902 aa23.53■■□□□ 1.36
CIRBP-245ENST00000621399 HSP90B1P14625 803 aaKnown RBP23.53■■□□□ 1.36
CIRBP-245ENST00000621399 MASTLQ96GX5 879 aa23.53■■□□□ 1.36
CIRBP-245ENST00000621399 RCAN3Q9UKA8 241 aa23.53■■□□□ 1.36
CIRBP-245ENST00000621399 H7C1W4 665 aa23.52■■□□□ 1.36
CIRBP-245ENST00000621399 NPR1P16066 1061 aa23.52■■□□□ 1.36
CIRBP-245ENST00000621399 CRY2Q49AN0 593 aa23.52■■□□□ 1.36
CIRBP-245ENST00000621399 DALRD3Q5D0E6 543 aaKnown RBP23.52■■□□□ 1.36
CIRBP-245ENST00000621399 STYK1Q6J9G0 422 aa23.52■■□□□ 1.36
CIRBP-245ENST00000621399 C3orf67Q6ZVT6 689 aa23.52■■□□□ 1.36
CIRBP-245ENST00000621399 BCS1LQ9Y276 419 aa23.52■■□□□ 1.36
CIRBP-245ENST00000621399 ANKRD31Q8N7Z5 1873 aa23.51■■□□□ 1.35
CIRBP-245ENST00000621399 ZKSCAN2Q63HK3 967 aa23.51■■□□□ 1.35
CIRBP-245ENST00000621399 UBE3BQ7Z3V4 1068 aa23.51■■□□□ 1.35
CIRBP-245ENST00000621399 RPGRQ92834 1020 aaKnown RBP23.51■■□□□ 1.35
CIRBP-245ENST00000621399 KIAA1551Q9HCM1 1747 aa23.5■■□□□ 1.35
CIRBP-245ENST00000621399 N4BP2Q86UW6 1770 aaPredicted RBP23.5■■□□□ 1.35
CIRBP-245ENST00000621399 ATF7IPQ6VMQ6 1270 aa23.5■■□□□ 1.35
CIRBP-245ENST00000621399 TTLL6Q8N841 843 aa23.5■■□□□ 1.35
CIRBP-245ENST00000621399 C9orf78Q9NZ63 289 aaPredicted RBP23.5■■□□□ 1.35
CIRBP-245ENST00000621399 TRIM27P14373 513 aa23.49■■□□□ 1.35
CIRBP-245ENST00000621399 YY1P25490 414 aa23.49■■□□□ 1.35
CIRBP-245ENST00000621399 CCT4P50991 539 aaKnown RBP23.49■■□□□ 1.35
CIRBP-245ENST00000621399 CNKSR1Q969H4 720 aa23.49■■□□□ 1.35
CIRBP-245ENST00000621399 CDHR2Q9BYE9 1310 aa23.49■■□□□ 1.35
CIRBP-245ENST00000621399 GRM8O00222 908 aa23.48■■□□□ 1.35
CIRBP-245ENST00000621399 PDE8AO60658 829 aa23.48■■□□□ 1.35
CIRBP-245ENST00000621399 YBX3P16989 372 aaKnown RBP eCLIP23.48■■□□□ 1.35
CIRBP-245ENST00000621399 TNRC6CQ9HCJ0 1690 aaKnown RBP23.48■■□□□ 1.35
CIRBP-245ENST00000621399 ALDH1B1P30837 517 aa23.47■■□□□ 1.35
CIRBP-245ENST00000621399 HOXA10P31260 410 aaPredicted RBP23.47■■□□□ 1.35
CIRBP-245ENST00000621399 CLUAP1Q96AJ1 413 aa23.47■■□□□ 1.35
CIRBP-245ENST00000621399 RBM17Q96I25 401 aaKnown RBP23.47■■□□□ 1.35
CIRBP-245ENST00000621399 SF3B3Q15393 1217 aaKnown RBP23.46■■□□□ 1.35
CIRBP-245ENST00000621399 TNNQ9UQP3 1299 aa23.46■■□□□ 1.35
CIRBP-245ENST00000621399 ABCC4O15439 1325 aa23.45■■□□□ 1.34
CIRBP-245ENST00000621399 GRIN3BO60391 1043 aa23.45■■□□□ 1.34
CIRBP-245ENST00000621399 CASP7P55210 303 aa23.45■■□□□ 1.34
CIRBP-245ENST00000621399 PRPF40BQ6NWY9 871 aaKnown RBP23.44■■□□□ 1.34
CIRBP-245ENST00000621399 DDX46Q7L014 1031 aaKnown RBP23.44■■□□□ 1.34
CIRBP-245ENST00000621399 CRAMP1Q96RY5 1269 aa23.44■■□□□ 1.34
CIRBP-245ENST00000621399 COL11A2P13942 1736 aaPredicted RBP23.44■■□□□ 1.34
CIRBP-245ENST00000621399 INTS3Q68E01 1043 aaKnown RBP23.43■■□□□ 1.34
CIRBP-245ENST00000621399 FTSJ3Q8IY81 847 aaKnown RBP23.43■■□□□ 1.34
CIRBP-245ENST00000621399 ZNF219Q9P2Y4 722 aaPredicted RBP23.43■■□□□ 1.34
CIRBP-245ENST00000621399 GOLGB1Q14789 3259 aaKnown RBP23.43■■□□□ 1.34
CIRBP-245ENST00000621399 NBPF7P0C2Y1 421 aaPredicted RBP23.42■■□□□ 1.34
CIRBP-245ENST00000621399 CTSWP56202 376 aa23.42■■□□□ 1.34
CIRBP-245ENST00000621399 CCDC152Q4G0S7 254 aa23.42■■□□□ 1.34
CIRBP-245ENST00000621399 CCDC85AQ96PX6 553 aaPredicted RBP23.42■■□□□ 1.34
CIRBP-245ENST00000621399 PLA2G12BQ9BX93 195 aa23.42■■□□□ 1.34
CIRBP-245ENST00000621399 USP44Q9H0E7 712 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms