RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 EDC4Q6P2E9 1401 aaKnown RBP9.71□□□□□ -0.86
ALMS1-208ENST00000620466 SHROOM2Q13796 1616 aa9.71□□□□□ -0.86
ALMS1-208ENST00000620466 MAP3K5Q99683 1374 aa9.71□□□□□ -0.86
ALMS1-208ENST00000620466 ANO6Q4KMQ2 910 aa9.71□□□□□ -0.86
ALMS1-208ENST00000620466 ANKRD24Q8TF21 1146 aa9.71□□□□□ -0.86
ALMS1-208ENST00000620466 KIF2AO00139 706 aaPredicted RBP9.7□□□□□ -0.86
ALMS1-208ENST00000620466 PPFIA3O75145 1194 aa9.7□□□□□ -0.86
ALMS1-208ENST00000620466 NOLC1Q14978 699 aaKnown RBP eCLIP9.7□□□□□ -0.86
ALMS1-208ENST00000620466 CROCC2H7BZ55 1655 aa9.7□□□□□ -0.86
ALMS1-208ENST00000620466 ATP5J2-PTCD1G3V325 749 aa9.7□□□□□ -0.86
ALMS1-208ENST00000620466 PTCD1O75127 700 aaKnown RBP9.7□□□□□ -0.86
ALMS1-208ENST00000620466 IBSPP21815 317 aaPredicted RBP9.7□□□□□ -0.86
ALMS1-208ENST00000620466 PRIMPOLQ96LW4 560 aa9.7□□□□□ -0.86
ALMS1-208ENST00000620466 TCEANC2Q96MN5 208 aa9.7□□□□□ -0.86
ALMS1-208ENST00000620466 RBSNQ9H1K0 784 aa9.7□□□□□ -0.86
ALMS1-208ENST00000620466 PRDM11Q9NQV5 511 aa9.7□□□□□ -0.86
ALMS1-208ENST00000620466 CEP131Q9UPN4 1083 aa9.7□□□□□ -0.86
ALMS1-208ENST00000620466 PA2G4Q9UQ80 394 aaKnown RBP9.7□□□□□ -0.86
ALMS1-208ENST00000620466 ZMYM3Q14202 1370 aa9.7□□□□□ -0.86
ALMS1-208ENST00000620466 ZNF213O14771 459 aa9.7□□□□□ -0.86
ALMS1-208ENST00000620466 STIM1Q13586 685 aa9.7□□□□□ -0.86
ALMS1-208ENST00000620466 SEPT11Q9NVA2 429 aaKnown RBP9.7□□□□□ -0.86
ALMS1-208ENST00000620466 ZNF76P36508 570 aa9.7□□□□□ -0.86
ALMS1-208ENST00000620466 KIF18AQ8NI77 898 aa9.7□□□□□ -0.86
ALMS1-208ENST00000620466 ADCY10Q96PN6 1610 aa9.7□□□□□ -0.86
ALMS1-208ENST00000620466 ZNF165P49910 485 aa9.7□□□□□ -0.86
ALMS1-208ENST00000620466 LEKR1Q6ZMV7 388 aa9.7□□□□□ -0.86
ALMS1-208ENST00000620466 DEF6Q9H4E7 631 aa9.7□□□□□ -0.86
ALMS1-208ENST00000620466 RAI14Q9P0K7 980 aa9.7□□□□□ -0.86
ALMS1-208ENST00000620466 ERLIN2O94905 339 aa9.69□□□□□ -0.86
ALMS1-208ENST00000620466 INTS4Q96HW7 963 aaKnown RBP9.69□□□□□ -0.86
ALMS1-208ENST00000620466 ZNHIT6Q9NWK9 470 aaKnown RBP9.69□□□□□ -0.86
ALMS1-208ENST00000620466 TTC41PQ6P2S7 1318 aa9.69□□□□□ -0.86
ALMS1-208ENST00000620466 NEMFO60524 1076 aa9.69□□□□□ -0.86
ALMS1-208ENST00000620466 CASQ1P31415 396 aa9.69□□□□□ -0.86
ALMS1-208ENST00000620466 TMC6Q7Z403 805 aa9.69□□□□□ -0.86
ALMS1-208ENST00000620466 LRP2BPQ9P2M1 347 aa9.69□□□□□ -0.86
ALMS1-208ENST00000620466 UGGT1Q9NYU2 1555 aa9.69□□□□□ -0.86
ALMS1-208ENST00000620466 ERICH4A6NGS2 130 aa9.69□□□□□ -0.86
ALMS1-208ENST00000620466 HS1BP3Q53T59 392 aa9.69□□□□□ -0.86
ALMS1-208ENST00000620466 UBE3BQ7Z3V4 1068 aa9.69□□□□□ -0.86
ALMS1-208ENST00000620466 ZSCAN16Q9H4T2 348 aaPredicted RBP9.69□□□□□ -0.86
ALMS1-208ENST00000620466 CDC42BPAQ5VT25 1732 aa9.69□□□□□ -0.86
ALMS1-208ENST00000620466 BIN1O00499 593 aa9.69□□□□□ -0.86
ALMS1-208ENST00000620466 PIBF1Q8WXW3 757 aa9.69□□□□□ -0.86
ALMS1-208ENST00000620466 ALDH1L1O75891 902 aa9.68□□□□□ -0.86
ALMS1-208ENST00000620466 Q6ZUG5 572 aa9.68□□□□□ -0.86
ALMS1-208ENST00000620466 RAB11FIP4Q86YS3 637 aa9.68□□□□□ -0.86
ALMS1-208ENST00000620466 UBXN4Q92575 508 aa9.68□□□□□ -0.86
ALMS1-208ENST00000620466 EYA1Q99502 592 aa9.68□□□□□ -0.86
ALMS1-208ENST00000620466 LRRC2Q9BYS8 371 aa9.68□□□□□ -0.86
ALMS1-208ENST00000620466 ZSCAN12O43309 604 aa9.68□□□□□ -0.86
ALMS1-208ENST00000620466 TOP1P11387 765 aaKnown RBP9.68□□□□□ -0.86
ALMS1-208ENST00000620466 AKAP4Q5JQC9 854 aa9.68□□□□□ -0.86
ALMS1-208ENST00000620466 DDX46Q7L014 1031 aaKnown RBP9.68□□□□□ -0.86
ALMS1-208ENST00000620466 UBE2Q2Q8WVN8 375 aa9.68□□□□□ -0.86
ALMS1-208ENST00000620466 PHAXQ9H814 394 aaKnown RBP9.68□□□□□ -0.86
ALMS1-208ENST00000620466 ERLIN1O75477 346 aa9.68□□□□□ -0.86
ALMS1-208ENST00000620466 POLR3DP05423 398 aaPredicted RBP9.68□□□□□ -0.86
ALMS1-208ENST00000620466 NEFHP12036 1026 aa9.68□□□□□ -0.86
ALMS1-208ENST00000620466 SSRP1Q08945 709 aaKnown RBP9.68□□□□□ -0.86
ALMS1-208ENST00000620466 SEPT7Q16181 437 aaKnown RBP9.68□□□□□ -0.86
ALMS1-208ENST00000620466 CEP135Q66GS9 1140 aa9.68□□□□□ -0.86
ALMS1-208ENST00000620466 BRF1Q92994 677 aa9.68□□□□□ -0.86
ALMS1-208ENST00000620466 SOS1Q07889 1333 aaPredicted RBP9.68□□□□□ -0.86
ALMS1-208ENST00000620466 MYOM2P54296 1465 aa9.68□□□□□ -0.86
ALMS1-208ENST00000620466 STARD3NLO95772 234 aa9.68□□□□□ -0.86
ALMS1-208ENST00000620466 IGHMBP2P38935 993 aaKnown RBP9.68□□□□□ -0.86
ALMS1-208ENST00000620466 HAND2P61296 217 aa9.68□□□□□ -0.86
ALMS1-208ENST00000620466 IFIT5Q13325 482 aaKnown RBP9.68□□□□□ -0.86
ALMS1-208ENST00000620466 KSR2Q6VAB6 950 aa9.68□□□□□ -0.86
ALMS1-208ENST00000620466 ANKRD62A6NC57 917 aa9.68□□□□□ -0.86
ALMS1-208ENST00000620466 GOLGA8AA7E2F4 631 aa9.68□□□□□ -0.86
ALMS1-208ENST00000620466 GSDMDP57764 484 aa9.68□□□□□ -0.86
ALMS1-208ENST00000620466 RUFY3Q7L099 469 aa9.68□□□□□ -0.86
ALMS1-208ENST00000620466 PLEKHF1Q96S99 279 aa9.68□□□□□ -0.86
ALMS1-208ENST00000620466 TMX1Q9H3N1 280 aa9.68□□□□□ -0.86
ALMS1-208ENST00000620466 ZBTB3Q9H5J0 574 aa9.68□□□□□ -0.86
ALMS1-208ENST00000620466 TMOD3Q9NYL9 352 aa9.68□□□□□ -0.86
ALMS1-208ENST00000620466 SPDYE4A6NLX3 237 aa9.67□□□□□ -0.86
ALMS1-208ENST00000620466 GRM8O00222 908 aa9.67□□□□□ -0.86
ALMS1-208ENST00000620466 CWC25Q9NXE8 425 aaPredicted RBP9.67□□□□□ -0.86
ALMS1-208ENST00000620466 NEBLO76041 1014 aa9.67□□□□□ -0.86
ALMS1-208ENST00000620466 CCDC181Q5TID7 509 aa9.67□□□□□ -0.86
ALMS1-208ENST00000620466 CREB3L3Q68CJ9 461 aa9.67□□□□□ -0.86
ALMS1-208ENST00000620466 FAM200AQ8TCP9 573 aa9.67□□□□□ -0.86
ALMS1-208ENST00000620466 TTC12Q9H892 705 aaPredicted RBP9.67□□□□□ -0.86
ALMS1-208ENST00000620466 SLC12A7Q9Y666 1083 aa9.67□□□□□ -0.86
ALMS1-208ENST00000620466 TMCO3Q6UWJ1 677 aa9.67□□□□□ -0.86
ALMS1-208ENST00000620466 USP16Q9Y5T5 823 aa9.67□□□□□ -0.86
ALMS1-208ENST00000620466 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.67□□□□□ -0.86
ALMS1-208ENST00000620466 ABCC4O15439 1325 aa9.67□□□□□ -0.86
ALMS1-208ENST00000620466 USP5P45974 858 aa9.67□□□□□ -0.86
ALMS1-208ENST00000620466 ZRSR2Q15696 482 aaKnown RBP9.67□□□□□ -0.86
ALMS1-208ENST00000620466 KRT28Q7Z3Y7 464 aa9.67□□□□□ -0.86
ALMS1-208ENST00000620466 ANKRD18AQ8IVF6 992 aa9.67□□□□□ -0.86
ALMS1-208ENST00000620466 CCDC144CPQ8IYA2 1237 aa9.67□□□□□ -0.86
ALMS1-208ENST00000620466 CNNM3Q8NE01 707 aa9.67□□□□□ -0.86
ALMS1-208ENST00000620466 NAPBQ9H115 298 aa9.67□□□□□ -0.86
ALMS1-208ENST00000620466 DACT1Q9NYF0 836 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms