RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 NFE2L2Q16236 605 aa12.26□□□□□ -0.45
VPS11-207ENST00000620429 PACS2Q86VP3 889 aa12.26□□□□□ -0.45
VPS11-207ENST00000620429 IFT57Q9NWB7 429 aa12.26□□□□□ -0.45
VPS11-207ENST00000620429 CCDC189A1A4V9 331 aa12.25□□□□□ -0.45
VPS11-207ENST00000620429 PTGS1P23219 599 aa12.25□□□□□ -0.45
VPS11-207ENST00000620429 TDO2P48775 406 aa12.25□□□□□ -0.45
VPS11-207ENST00000620429 TWISTNBQ3B726 338 aaPredicted RBP12.25□□□□□ -0.45
VPS11-207ENST00000620429 TMEM87AQ8NBN3 555 aa12.25□□□□□ -0.45
VPS11-207ENST00000620429 RTF1Q92541 710 aaKnown RBP12.25□□□□□ -0.45
VPS11-207ENST00000620429 UBXN6Q9BZV1 441 aa12.25□□□□□ -0.45
VPS11-207ENST00000620429 TTC21BQ7Z4L5 1316 aa12.25□□□□□ -0.45
VPS11-207ENST00000620429 POTEAQ6S8J7 498 aa12.25□□□□□ -0.45
VPS11-207ENST00000620429 API5Q9BZZ5 524 aaKnown RBP12.25□□□□□ -0.45
VPS11-207ENST00000620429 DCTPP1Q9H773 170 aa12.25□□□□□ -0.45
VPS11-207ENST00000620429 MBIPQ9NS73 344 aa12.25□□□□□ -0.45
VPS11-207ENST00000620429 MAP2K1Q02750 393 aaPredicted RBP12.24□□□□□ -0.45
VPS11-207ENST00000620429 FOXD4L5Q5VV16 416 aaPredicted RBP12.24□□□□□ -0.45
VPS11-207ENST00000620429 SPC24Q8NBT2 197 aa12.24□□□□□ -0.45
VPS11-207ENST00000620429 FOXD4L4Q8WXT5 416 aaPredicted RBP12.24□□□□□ -0.45
VPS11-207ENST00000620429 SMARCE1Q969G3 411 aa12.24□□□□□ -0.45
VPS11-207ENST00000620429 PSD3Q9NYI0 1048 aa12.24□□□□□ -0.45
VPS11-207ENST00000620429 FAM83GA6ND36 823 aa12.24□□□□□ -0.45
VPS11-207ENST00000620429 SLU7O95391 586 aaKnown RBP12.24□□□□□ -0.45
VPS11-207ENST00000620429 CASC1Q6TDU7 716 aa12.24□□□□□ -0.45
VPS11-207ENST00000620429 RPAINQ86UA6 219 aa12.24□□□□□ -0.45
VPS11-207ENST00000620429 OTUD7AQ8TE49 926 aaPredicted RBP12.24□□□□□ -0.45
VPS11-207ENST00000620429 CEP89Q96ST8 783 aa12.24□□□□□ -0.45
VPS11-207ENST00000620429 APBB1O00213 710 aa12.24□□□□□ -0.45
VPS11-207ENST00000620429 GOLIM4O00461 696 aa12.24□□□□□ -0.45
VPS11-207ENST00000620429 GADD45BO75293 160 aaPredicted RBP12.24□□□□□ -0.45
VPS11-207ENST00000620429 DCTN1Q14203 1278 aa12.24□□□□□ -0.45
VPS11-207ENST00000620429 CCDC171Q6TFL3 1326 aa12.23□□□□□ -0.45
VPS11-207ENST00000620429 MON2Q7Z3U7 1717 aa12.23□□□□□ -0.45
VPS11-207ENST00000620429 TULP1O00294 542 aaPredicted RBP12.23□□□□□ -0.45
VPS11-207ENST00000620429 ATP8B1O43520 1251 aa12.23□□□□□ -0.45
VPS11-207ENST00000620429 ZRANB2O95218 330 aaKnown RBP eCLIP12.23□□□□□ -0.45
VPS11-207ENST00000620429 SDSP20132 328 aa12.23□□□□□ -0.45
VPS11-207ENST00000620429 SART3Q15020 963 aaKnown RBP12.23□□□□□ -0.45
VPS11-207ENST00000620429 TPD52L1Q16890 204 aaPredicted RBP12.23□□□□□ -0.45
VPS11-207ENST00000620429 MCTP2Q6DN12 878 aa12.23□□□□□ -0.45
VPS11-207ENST00000620429 AATKQ6ZMQ8 1374 aa12.23□□□□□ -0.45
VPS11-207ENST00000620429 ZNF853P0CG23 659 aa12.23□□□□□ -0.45
VPS11-207ENST00000620429 ST5P78524 1137 aa12.23□□□□□ -0.45
VPS11-207ENST00000620429 C8orf58Q8NAV2 365 aa12.23□□□□□ -0.45
VPS11-207ENST00000620429 ATP6V1AP38606 617 aa12.22□□□□□ -0.45
VPS11-207ENST00000620429 CLCN6P51797 869 aa12.22□□□□□ -0.45
VPS11-207ENST00000620429 TICAM2Q86XR7 235 aa12.22□□□□□ -0.45
VPS11-207ENST00000620429 PLEKHG3A1L390 1219 aa12.22□□□□□ -0.45
VPS11-207ENST00000620429 IRF6O14896 467 aa12.22□□□□□ -0.45
VPS11-207ENST00000620429 PLCB2Q00722 1185 aa12.22□□□□□ -0.45
VPS11-207ENST00000620429 TRDNQ13061 729 aa12.22□□□□□ -0.45
VPS11-207ENST00000620429 EIF4A2Q14240 407 aaKnown RBP12.22□□□□□ -0.45
VPS11-207ENST00000620429 NYAP1Q6ZVC0 841 aa12.22□□□□□ -0.45
VPS11-207ENST00000620429 USP48Q86UV5 1035 aa12.22□□□□□ -0.45
VPS11-207ENST00000620429 RNF217Q8TC41 542 aa12.22□□□□□ -0.45
VPS11-207ENST00000620429 RBM28Q9NW13 759 aaKnown RBP12.22□□□□□ -0.45
VPS11-207ENST00000620429 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.22□□□□□ -0.45
VPS11-207ENST00000620429 LRP6O75581 1613 aa12.21□□□□□ -0.45
VPS11-207ENST00000620429 SMARCA5O60264 1052 aaPredicted RBP12.21□□□□□ -0.45
VPS11-207ENST00000620429 ATF3P18847 181 aa12.21□□□□□ -0.45
VPS11-207ENST00000620429 HSP90AB2PQ58FF8 381 aa12.21□□□□□ -0.45
VPS11-207ENST00000620429 ZSCAN25Q6NSZ9 544 aa12.21□□□□□ -0.45
VPS11-207ENST00000620429 FAM43BQ6ZT52 329 aaPredicted RBP12.21□□□□□ -0.45
VPS11-207ENST00000620429 CCDC186Q7Z3E2 898 aa12.21□□□□□ -0.45
VPS11-207ENST00000620429 RBM33Q96EV2 1170 aaKnown RBP12.21□□□□□ -0.45
VPS11-207ENST00000620429 AKAP12Q02952 1782 aa12.21□□□□□ -0.45
VPS11-207ENST00000620429 PPM1EQ8WY54 764 aa12.21□□□□□ -0.46
VPS11-207ENST00000620429 SGSM3Q96HU1 749 aa12.21□□□□□ -0.46
VPS11-207ENST00000620429 AK7Q96M32 723 aa12.21□□□□□ -0.46
VPS11-207ENST00000620429 ITSN1Q15811 1721 aa12.2□□□□□ -0.46
VPS11-207ENST00000620429 USP6P35125 1406 aa12.2□□□□□ -0.46
VPS11-207ENST00000620429 CCDC196A0A1B0GTZ2 297 aa12.2□□□□□ -0.46
VPS11-207ENST00000620429 CPP00450 1065 aa12.2□□□□□ -0.46
VPS11-207ENST00000620429 IVLP07476 585 aa12.2□□□□□ -0.46
VPS11-207ENST00000620429 LRMPQ12912 555 aa12.2□□□□□ -0.46
VPS11-207ENST00000620429 DNAJC21Q5F1R6 531 aaKnown RBP12.2□□□□□ -0.46
VPS11-207ENST00000620429 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.2□□□□□ -0.46
VPS11-207ENST00000620429 ANKRD44Q8N8A2 993 aa12.2□□□□□ -0.46
VPS11-207ENST00000620429 EXOC4Q96A65 974 aa12.2□□□□□ -0.46
VPS11-207ENST00000620429 PPP1R12AO14974 1030 aaPredicted RBP12.2□□□□□ -0.46
VPS11-207ENST00000620429 SULT6B1Q6IMI4 303 aa12.2□□□□□ -0.46
VPS11-207ENST00000620429 ELP1O95163 1332 aa12.2□□□□□ -0.46
VPS11-207ENST00000620429 COL22A1Q8NFW1 1626 aaPredicted RBP12.2□□□□□ -0.46
VPS11-207ENST00000620429 CUL4AQ13619 759 aa12.19□□□□□ -0.46
VPS11-207ENST00000620429 MMS22LQ6ZRQ5 1243 aa12.19□□□□□ -0.46
VPS11-207ENST00000620429 INTS4Q96HW7 963 aaKnown RBP12.19□□□□□ -0.46
VPS11-207ENST00000620429 ADGRL3Q9HAR2 1447 aa12.19□□□□□ -0.46
VPS11-207ENST00000620429 ERC2O15083 957 aa12.19□□□□□ -0.46
VPS11-207ENST00000620429 POLR3GO15318 223 aaPredicted RBP12.19□□□□□ -0.46
VPS11-207ENST00000620429 ACTN2P35609 894 aa12.19□□□□□ -0.46
VPS11-207ENST00000620429 MAP2K2P36507 400 aa12.19□□□□□ -0.46
VPS11-207ENST00000620429 REXO1L1PQ8IX06 675 aa12.19□□□□□ -0.46
VPS11-207ENST00000620429 ANKRD20A12PQ8NF67 263 aa12.19□□□□□ -0.46
VPS11-207ENST00000620429 ZNF592Q92610 1267 aa12.19□□□□□ -0.46
VPS11-207ENST00000620429 EXOC6BQ9Y2D4 811 aa12.19□□□□□ -0.46
VPS11-207ENST00000620429 OVOS2A0A0J9YW53 1432 aa12.19□□□□□ -0.46
VPS11-207ENST00000620429 OVOS2Q6IE36 1432 aa12.19□□□□□ -0.46
VPS11-207ENST00000620429 NEK4P51957 841 aa12.18□□□□□ -0.46
VPS11-207ENST00000620429 PTPN14Q15678 1187 aa12.18□□□□□ -0.46
VPS11-207ENST00000620429 NUTM2GQ5VZR2 741 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms