RNA–Protein interactions for RNA: ENST00000619053.1

AP001059.3-201, humanhuman

BASIC

Gene AP001059.3, Length 235 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001059.3-201ENST00000619053 ALDH1B1P30837 517 aa21.23■□□□□ 0.99
AP001059.3-201ENST00000619053 AIMP1Q12904 312 aaKnown RBP21.23■□□□□ 0.99
AP001059.3-201ENST00000619053 CHMP4AQ9BY43 222 aa21.23■□□□□ 0.99
AP001059.3-201ENST00000619053 TCIRG1Q13488 830 aa21.22■□□□□ 0.99
AP001059.3-201ENST00000619053 PLBD2Q8NHP8 589 aa21.22■□□□□ 0.99
AP001059.3-201ENST00000619053 KDM2BQ8NHM5 1336 aa21.22■□□□□ 0.99
AP001059.3-201ENST00000619053 HOXA10P31260 410 aaPredicted RBP21.21■□□□□ 0.99
AP001059.3-201ENST00000619053 SLC10A5Q5PT55 438 aa21.21■□□□□ 0.99
AP001059.3-201ENST00000619053 WWC1Q8IX03 1113 aa21.21■□□□□ 0.99
AP001059.3-201ENST00000619053 UTP14AQ9BVJ6 771 aaKnown RBP21.21■□□□□ 0.99
AP001059.3-201ENST00000619053 TAOK3Q9H2K8 898 aa21.21■□□□□ 0.99
AP001059.3-201ENST00000619053 ZNF219Q9P2Y4 722 aaPredicted RBP21.21■□□□□ 0.99
AP001059.3-201ENST00000619053 CCDC93Q567U6 631 aa21.2■□□□□ 0.98
AP001059.3-201ENST00000619053 ANKRD13DQ6ZTN6 518 aa21.2■□□□□ 0.98
AP001059.3-201ENST00000619053 IL16Q14005 1332 aa21.2■□□□□ 0.98
AP001059.3-201ENST00000619053 NLRP10Q86W26 655 aa21.19■□□□□ 0.98
AP001059.3-201ENST00000619053 C8orf58Q8NAV2 365 aa21.19■□□□□ 0.98
AP001059.3-201ENST00000619053 NMRK2Q9NPI5 230 aa21.18■□□□□ 0.98
AP001059.3-201ENST00000619053 DDX60Q8IY21 1712 aaKnown RBP21.18■□□□□ 0.98
AP001059.3-201ENST00000619053 RTKN2Q8IZC4 609 aa21.17■□□□□ 0.98
AP001059.3-201ENST00000619053 RPGRQ92834 1020 aaKnown RBP21.17■□□□□ 0.98
AP001059.3-201ENST00000619053 NLRP3Q96P20 1036 aa21.17■□□□□ 0.98
AP001059.3-201ENST00000619053 CRAMP1Q96RY5 1269 aa21.17■□□□□ 0.98
AP001059.3-201ENST00000619053 WDR90Q96KV7 1748 aa21.16■□□□□ 0.98
AP001059.3-201ENST00000619053 GLTPD2A6NH11 291 aa21.16■□□□□ 0.98
AP001059.3-201ENST00000619053 ELL2O00472 640 aaPredicted RBP21.16■□□□□ 0.98
AP001059.3-201ENST00000619053 CCDC30Q5VVM6 783 aa21.16■□□□□ 0.98
AP001059.3-201ENST00000619053 CC2D2BQ6DHV5 1058 aa21.16■□□□□ 0.98
AP001059.3-201ENST00000619053 ISCA1Q9BUE6 129 aa21.16■□□□□ 0.98
AP001059.3-201ENST00000619053 SNED1Q8TER0 1413 aa21.15■□□□□ 0.98
AP001059.3-201ENST00000619053 TOMM70O94826 608 aa21.15■□□□□ 0.98
AP001059.3-201ENST00000619053 FKBP4Q02790 459 aaKnown RBP eCLIP21.15■□□□□ 0.98
AP001059.3-201ENST00000619053 TRIM28Q13263 835 aaKnown RBP21.15■□□□□ 0.98
AP001059.3-201ENST00000619053 RBM17Q96I25 401 aaKnown RBP21.15■□□□□ 0.98
AP001059.3-201ENST00000619053 SH3TC1Q8TE82 1336 aa21.14■□□□□ 0.97
AP001059.3-201ENST00000619053 SENP3-EIF4A1A0A087X0R7 540 aa21.14■□□□□ 0.97
AP001059.3-201ENST00000619053 GRIPAP1Q4V328 841 aa21.14■□□□□ 0.97
AP001059.3-201ENST00000619053 WDR63Q8IWG1 891 aa21.14■□□□□ 0.97
AP001059.3-201ENST00000619053 TRMT112Q9UI30 125 aaKnown RBP21.14■□□□□ 0.97
AP001059.3-201ENST00000619053 TAF1P21675 1872 aa21.13■□□□□ 0.97
AP001059.3-201ENST00000619053 C3orf67Q6ZVT6 689 aa21.13■□□□□ 0.97
AP001059.3-201ENST00000619053 TSPYL6Q8N831 410 aa21.13■□□□□ 0.97
AP001059.3-201ENST00000619053 TSR2Q969E8 191 aaKnown RBP21.13■□□□□ 0.97
AP001059.3-201ENST00000619053 GOLGA2Q08379 1002 aa21.12■□□□□ 0.97
AP001059.3-201ENST00000619053 DPY19L2Q6NUT2 758 aa21.12■□□□□ 0.97
AP001059.3-201ENST00000619053 RIC3Q7Z5B4 369 aa21.11■□□□□ 0.97
AP001059.3-201ENST00000619053 RBM46Q8TBY0 533 aaKnown RBP21.11■□□□□ 0.97
AP001059.3-201ENST00000619053 PSMD1Q99460 953 aa21.11■□□□□ 0.97
AP001059.3-201ENST00000619053 PHAXQ9H814 394 aaKnown RBP21.11■□□□□ 0.97
AP001059.3-201ENST00000619053 RRAGCQ9HB90 399 aa21.11■□□□□ 0.97
AP001059.3-201ENST00000619053 OLFM4Q6UX06 510 aa21.1■□□□□ 0.97
AP001059.3-201ENST00000619053 C16orf71Q8IYS4 520 aaPredicted RBP21.1■□□□□ 0.97
AP001059.3-201ENST00000619053 SCN4AP35499 1836 aa21.1■□□□□ 0.97
AP001059.3-201ENST00000619053 DDX58O95786 925 aaKnown RBP21.09■□□□□ 0.97
AP001059.3-201ENST00000619053 HCLS1P14317 486 aaPredicted RBP21.09■□□□□ 0.97
AP001059.3-201ENST00000619053 VEGFAP15692 232 aaPredicted RBP21.09■□□□□ 0.97
AP001059.3-201ENST00000619053 HSPA6P17066 643 aa21.09■□□□□ 0.97
AP001059.3-201ENST00000619053 TWISTNBQ3B726 338 aaPredicted RBP21.09■□□□□ 0.97
AP001059.3-201ENST00000619053 FAM9BQ8IZU0 186 aa21.09■□□□□ 0.97
AP001059.3-201ENST00000619053 SYNE4Q8N205 404 aa21.09■□□□□ 0.97
AP001059.3-201ENST00000619053 ATP5J2-PTCD1G3V325 749 aa21.08■□□□□ 0.97
AP001059.3-201ENST00000619053 PPEF1O14829 653 aaPredicted RBP21.08■□□□□ 0.97
AP001059.3-201ENST00000619053 STK31Q9BXU1 1019 aa21.08■□□□□ 0.97
AP001059.3-201ENST00000619053 MYH3P11055 1940 aa21.08■□□□□ 0.96
AP001059.3-201ENST00000619053 ABCC4O15439 1325 aa21.07■□□□□ 0.96
AP001059.3-201ENST00000619053 FANCIQ9NVI1 1328 aa21.07■□□□□ 0.96
AP001059.3-201ENST00000619053 ZNF277Q9NRM2 450 aaPredicted RBP21.07■□□□□ 0.96
AP001059.3-201ENST00000619053 LRRC37AA6NMS7 1700 aa21.07■□□□□ 0.96
AP001059.3-201ENST00000619053 CEP350Q5VT06 3117 aa21.06■□□□□ 0.96
AP001059.3-201ENST00000619053 BBOX1O75936 387 aa21.06■□□□□ 0.96
AP001059.3-201ENST00000619053 IARSP41252 1262 aaKnown RBP21.06■□□□□ 0.96
AP001059.3-201ENST00000619053 FSTL1Q12841 308 aa21.06■□□□□ 0.96
AP001059.3-201ENST00000619053 ATP6V0A2Q9Y487 856 aa21.06■□□□□ 0.96
AP001059.3-201ENST00000619053 SF3B3Q15393 1217 aaKnown RBP21.05■□□□□ 0.96
AP001059.3-201ENST00000619053 DDX46Q7L014 1031 aaKnown RBP21.05■□□□□ 0.96
AP001059.3-201ENST00000619053 CCDC191Q8NCU4 936 aa21.05■□□□□ 0.96
AP001059.3-201ENST00000619053 FAM89AQ96GI7 184 aa21.05■□□□□ 0.96
AP001059.3-201ENST00000619053 METTL22Q9BUU2 404 aaPredicted RBP21.05■□□□□ 0.96
AP001059.3-201ENST00000619053 SALL2Q9Y467 1007 aaPredicted RBP21.05■□□□□ 0.96
AP001059.3-201ENST00000619053 POTECB2RU33 542 aa21.04■□□□□ 0.96
AP001059.3-201ENST00000619053 HSP90B1P14625 803 aaKnown RBP21.04■□□□□ 0.96
AP001059.3-201ENST00000619053 KSR2Q6VAB6 950 aa21.04■□□□□ 0.96
AP001059.3-201ENST00000619053 TMC4Q7Z404 712 aa21.04■□□□□ 0.96
AP001059.3-201ENST00000619053 ZBTB38Q8NAP3 1195 aaPredicted RBP21.04■□□□□ 0.96
AP001059.3-201ENST00000619053 MYD88Q99836 296 aa21.04■□□□□ 0.96
AP001059.3-201ENST00000619053 TMX4Q9H1E5 349 aaPredicted RBP21.04■□□□□ 0.96
AP001059.3-201ENST00000619053 GRAPQ13588 217 aa21.03■□□□□ 0.96
AP001059.3-201ENST00000619053 SP8Q8IXZ3 490 aa21.03■□□□□ 0.96
AP001059.3-201ENST00000619053 GRAPLQ8TC17 118 aaPredicted RBP21.03■□□□□ 0.96
AP001059.3-201ENST00000619053 VPS33BQ9H267 617 aa21.03■□□□□ 0.96
AP001059.3-201ENST00000619053 FZD9O00144 591 aa21.02■□□□□ 0.96
AP001059.3-201ENST00000619053 IRS4O14654 1257 aaPredicted RBP21.02■□□□□ 0.96
AP001059.3-201ENST00000619053 DDNO94850 711 aaPredicted RBP21.02■□□□□ 0.96
AP001059.3-201ENST00000619053 L3MBTL3Q96JM7 780 aaPredicted RBP21.02■□□□□ 0.96
AP001059.3-201ENST00000619053 MAP3K2Q9Y2U5 619 aa21.02■□□□□ 0.96
AP001059.3-201ENST00000619053 PI4KAP2A4QPH2 592 aa21.01■□□□□ 0.95
AP001059.3-201ENST00000619053 VAMP4O75379 141 aa21.01■□□□□ 0.95
AP001059.3-201ENST00000619053 SLC4A2P04920 1241 aa21.01■□□□□ 0.95
AP001059.3-201ENST00000619053 PCCAP05165 728 aaPredicted RBP21.01■□□□□ 0.95
AP001059.3-201ENST00000619053 PI4KAP1Q8N8J0 262 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms