RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 ZSWIM6Q9HCJ5 1215 aa23.16■■□□□ 1.3
PCDHGB3-202ENST00000618934 RBM8AQ9Y5S9 174 aaKnown RBP23.16■■□□□ 1.3
PCDHGB3-202ENST00000618934 TAF6LQ9Y6J9 622 aa23.16■■□□□ 1.3
PCDHGB3-202ENST00000618934 A0A0D9SFI3 127 aa23.15■■□□□ 1.3
PCDHGB3-202ENST00000618934 PHKG2P15735 406 aa23.15■■□□□ 1.3
PCDHGB3-202ENST00000618934 EDC3Q96F86 508 aaKnown RBP23.15■■□□□ 1.3
PCDHGB3-202ENST00000618934 SMC3Q9UQE7 1217 aa23.15■■□□□ 1.3
PCDHGB3-202ENST00000618934 GCKRQ14397 625 aa23.14■■□□□ 1.3
PCDHGB3-202ENST00000618934 CREB3L3Q68CJ9 461 aa23.14■■□□□ 1.29
PCDHGB3-202ENST00000618934 LARP1Q6PKG0 1096 aaKnown RBP23.14■■□□□ 1.29
PCDHGB3-202ENST00000618934 NECAB1Q8N987 351 aa23.14■■□□□ 1.29
PCDHGB3-202ENST00000618934 MEGF6O75095 1541 aa23.14■■□□□ 1.29
PCDHGB3-202ENST00000618934 VPS53Q5VIR6 699 aa23.13■■□□□ 1.29
PCDHGB3-202ENST00000618934 LRP10Q7Z4F1 713 aa23.13■■□□□ 1.29
PCDHGB3-202ENST00000618934 SCN11AQ9UI33 1791 aa23.13■■□□□ 1.29
PCDHGB3-202ENST00000618934 GJB2P29033 226 aa23.13■■□□□ 1.29
PCDHGB3-202ENST00000618934 ME3Q16798 604 aa23.13■■□□□ 1.29
PCDHGB3-202ENST00000618934 HDAC5Q9UQL6 1122 aa23.13■■□□□ 1.29
PCDHGB3-202ENST00000618934 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.13■■□□□ 1.29
PCDHGB3-202ENST00000618934 ADAMTSL3P82987 1691 aa23.12■■□□□ 1.29
PCDHGB3-202ENST00000618934 MAP4K1Q92918 833 aa23.12■■□□□ 1.29
PCDHGB3-202ENST00000618934 CYP46A1Q9Y6A2 500 aa23.12■■□□□ 1.29
PCDHGB3-202ENST00000618934 F13A1P00488 732 aa23.12■■□□□ 1.29
PCDHGB3-202ENST00000618934 CHRNA2Q15822 529 aa23.12■■□□□ 1.29
PCDHGB3-202ENST00000618934 TCEANC2Q96MN5 208 aa23.12■■□□□ 1.29
PCDHGB3-202ENST00000618934 TSPY26PQ9H489 355 aa23.12■■□□□ 1.29
PCDHGB3-202ENST00000618934 TMEM87AQ8NBN3 555 aa23.11■■□□□ 1.29
PCDHGB3-202ENST00000618934 METTL22Q9BUU2 404 aaPredicted RBP23.11■■□□□ 1.29
PCDHGB3-202ENST00000618934 TM6SF1Q9BZW5 370 aa23.11■■□□□ 1.29
PCDHGB3-202ENST00000618934 C19orf44Q9H6X5 657 aa23.11■■□□□ 1.29
PCDHGB3-202ENST00000618934 NDUFB9Q9Y6M9 179 aa23.11■■□□□ 1.29
PCDHGB3-202ENST00000618934 TPCN1Q9ULQ1 816 aa23.11■■□□□ 1.29
PCDHGB3-202ENST00000618934 ALS2Q96Q42 1657 aa23.1■■□□□ 1.29
PCDHGB3-202ENST00000618934 SLC27A2O14975 620 aa23.1■■□□□ 1.29
PCDHGB3-202ENST00000618934 CHGBP05060 677 aa23.1■■□□□ 1.29
PCDHGB3-202ENST00000618934 TATP17735 454 aaPredicted RBP23.1■■□□□ 1.29
PCDHGB3-202ENST00000618934 ZNF589Q86UQ0 364 aaPredicted RBP23.1■■□□□ 1.29
PCDHGB3-202ENST00000618934 UBE2Q2Q8WVN8 375 aa23.1■■□□□ 1.29
PCDHGB3-202ENST00000618934 CYP27B1O15528 508 aa23.1■■□□□ 1.29
PCDHGB3-202ENST00000618934 MTMR6Q9Y217 621 aa23.1■■□□□ 1.29
PCDHGB3-202ENST00000618934 FIBPO43427 364 aa23.09■■□□□ 1.29
PCDHGB3-202ENST00000618934 KCNJ4P48050 445 aa23.09■■□□□ 1.29
PCDHGB3-202ENST00000618934 NEXNQ0ZGT2 675 aa23.09■■□□□ 1.29
PCDHGB3-202ENST00000618934 ANKRD13DQ6ZTN6 518 aa23.09■■□□□ 1.29
PCDHGB3-202ENST00000618934 FSD1Q9BTV5 496 aa23.09■■□□□ 1.29
PCDHGB3-202ENST00000618934 MSNP26038 577 aaKnown RBP23.09■■□□□ 1.29
PCDHGB3-202ENST00000618934 NOL7Q9UMY1 257 aaKnown RBP23.08■■□□□ 1.29
PCDHGB3-202ENST00000618934 ATP5J2-PTCD1G3V325 749 aa23.08■■□□□ 1.28
PCDHGB3-202ENST00000618934 PTCD1O75127 700 aaKnown RBP23.08■■□□□ 1.28
PCDHGB3-202ENST00000618934 DNM1Q05193 864 aaKnown RBP23.08■■□□□ 1.28
PCDHGB3-202ENST00000618934 SYAP1Q96A49 352 aaPredicted RBP23.08■■□□□ 1.28
PCDHGB3-202ENST00000618934 LMTK3Q96Q04 1460 aa23.07■■□□□ 1.28
PCDHGB3-202ENST00000618934 CSB-PGBD3P0DP91 1061 aa23.07■■□□□ 1.28
PCDHGB3-202ENST00000618934 ZKSCAN1P17029 563 aaPredicted RBP23.07■■□□□ 1.28
PCDHGB3-202ENST00000618934 RFX5P48382 616 aaPredicted RBP23.07■■□□□ 1.28
PCDHGB3-202ENST00000618934 HS1BP3Q53T59 392 aa23.07■■□□□ 1.28
PCDHGB3-202ENST00000618934 IFNL2Q8IZJ0 200 aa23.07■■□□□ 1.28
PCDHGB3-202ENST00000618934 SNRKQ9NRH2 765 aa23.07■■□□□ 1.28
PCDHGB3-202ENST00000618934 PTPN12Q05209 780 aaKnown RBP23.06■■□□□ 1.28
PCDHGB3-202ENST00000618934 UBE3BQ7Z3V4 1068 aa23.06■■□□□ 1.28
PCDHGB3-202ENST00000618934 DBNLQ9UJU6 430 aaKnown RBP23.06■■□□□ 1.28
PCDHGB3-202ENST00000618934 TFCP2Q12800 502 aa23.06■■□□□ 1.28
PCDHGB3-202ENST00000618934 COL15A1P39059 1388 aa23.05■■□□□ 1.28
PCDHGB3-202ENST00000618934 ZSCAN31Q96LW9 406 aaPredicted RBP23.05■■□□□ 1.28
PCDHGB3-202ENST00000618934 COL18A1P39060 1754 aa23.05■■□□□ 1.28
PCDHGB3-202ENST00000618934 MST1RQ04912 1400 aa23.05■■□□□ 1.28
PCDHGB3-202ENST00000618934 SNRPA1P09661 255 aaKnown RBP23.04■■□□□ 1.28
PCDHGB3-202ENST00000618934 SH2B1Q9NRF2 756 aaPredicted RBP23.04■■□□□ 1.28
PCDHGB3-202ENST00000618934 KIF1AQ12756 1690 aa23.04■■□□□ 1.28
PCDHGB3-202ENST00000618934 MED23Q9ULK4 1368 aa23.04■■□□□ 1.28
PCDHGB3-202ENST00000618934 VPS37CA5D8V6 355 aaPredicted RBP23.04■■□□□ 1.28
PCDHGB3-202ENST00000618934 HIP1O00291 1037 aa23.04■■□□□ 1.28
PCDHGB3-202ENST00000618934 UBE2HP62256 183 aa23.03■■□□□ 1.28
PCDHGB3-202ENST00000618934 COPRSQ9NQ92 184 aa23.03■■□□□ 1.28
PCDHGB3-202ENST00000618934 CCDC183Q5T5S1 534 aa23.03■■□□□ 1.28
PCDHGB3-202ENST00000618934 MRC1P22897 1456 aa23.02■■□□□ 1.28
PCDHGB3-202ENST00000618934 OFD1O75665 1012 aa23.02■■□□□ 1.28
PCDHGB3-202ENST00000618934 TTC5Q8N0Z6 440 aa23.02■■□□□ 1.28
PCDHGB3-202ENST00000618934 MPNDQ8N594 471 aa23.02■■□□□ 1.28
PCDHGB3-202ENST00000618934 TNNI3KQ59H18 835 aa23.02■■□□□ 1.28
PCDHGB3-202ENST00000618934 FAM173BQ6P4H8 233 aa23.02■■□□□ 1.28
PCDHGB3-202ENST00000618934 ZKSCAN5Q9Y2L8 839 aa23.02■■□□□ 1.28
PCDHGB3-202ENST00000618934 FPGT-TNNI3KV9GXZ4 949 aa23.02■■□□□ 1.28
PCDHGB3-202ENST00000618934 TAF5LO75529 589 aa23.01■■□□□ 1.27
PCDHGB3-202ENST00000618934 TOB2Q14106 344 aaPredicted RBP23.01■■□□□ 1.27
PCDHGB3-202ENST00000618934 CCDC129Q6ZRS4 1044 aa23.01■■□□□ 1.27
PCDHGB3-202ENST00000618934 DCAF5Q96JK2 942 aa23.01■■□□□ 1.27
PCDHGB3-202ENST00000618934 SEC62Q99442 399 aaKnown RBP23.01■■□□□ 1.27
PCDHGB3-202ENST00000618934 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.01■■□□□ 1.27
PCDHGB3-202ENST00000618934 AFDNP55196 1824 aaKnown RBP23.01■■□□□ 1.27
PCDHGB3-202ENST00000618934 ATF3P18847 181 aa23.01■■□□□ 1.27
PCDHGB3-202ENST00000618934 FERMT3Q86UX7 667 aa23.01■■□□□ 1.27
PCDHGB3-202ENST00000618934 CCDC9Q9Y3X0 531 aaKnown RBP23.01■■□□□ 1.27
PCDHGB3-202ENST00000618934 A0A087WZG4 1122 aa23■■□□□ 1.27
PCDHGB3-202ENST00000618934 PHF14O94880 888 aa23■■□□□ 1.27
PCDHGB3-202ENST00000618934 DBNDD2Q9BQY9 259 aa23■■□□□ 1.27
PCDHGB3-202ENST00000618934 RPS6KB1P23443 525 aa23■■□□□ 1.27
PCDHGB3-202ENST00000618934 BLOC1S2Q6QNY1 142 aa23■■□□□ 1.27
PCDHGB3-202ENST00000618934 CDC37L1Q7L3B6 337 aa23■■□□□ 1.27
PCDHGB3-202ENST00000618934 FMNL2Q96PY5 1086 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms