RNA–Protein interactions for RNA: ENST00000618363.4

SHANK2-221, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 434 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-221ENST00000618363 CCDC184Q52MB2 194 aa15.13■□□□□ 0.01
SHANK2-221ENST00000618363 RTKN2Q8IZC4 609 aa15.13■□□□□ 0.01
SHANK2-221ENST00000618363 RBM17Q96I25 401 aaKnown RBP15.13■□□□□ 0.01
SHANK2-221ENST00000618363 NMRK2Q9NPI5 230 aa15.13■□□□□ 0.01
SHANK2-221ENST00000618363 UBN2Q6ZU65 1347 aa15.13■□□□□ 0.01
SHANK2-221ENST00000618363 SBF1O95248 1867 aa15.12■□□□□ 0.01
SHANK2-221ENST00000618363 COL11A2P13942 1736 aaPredicted RBP15.12■□□□□ 0.01
SHANK2-221ENST00000618363 ELL2O00472 640 aaPredicted RBP15.12■□□□□ 0.01
SHANK2-221ENST00000618363 ZNF853P0CG23 659 aa15.12■□□□□ 0.01
SHANK2-221ENST00000618363 TCIRG1Q13488 830 aa15.12■□□□□ 0.01
SHANK2-221ENST00000618363 ANKRD13DQ6ZTN6 518 aa15.12■□□□□ 0.01
SHANK2-221ENST00000618363 LRP10Q7Z4F1 713 aa15.12■□□□□ 0.01
SHANK2-221ENST00000618363 PLBD2Q8NHP8 589 aa15.12■□□□□ 0.01
SHANK2-221ENST00000618363 RRAGCQ9HB90 399 aa15.12■□□□□ 0.01
SHANK2-221ENST00000618363 RNF123Q5XPI4 1314 aa15.12■□□□□ 0.01
SHANK2-221ENST00000618363 LTBP3Q9NS15 1303 aa15.12■□□□□ 0.01
SHANK2-221ENST00000618363 GLTPD2A6NH11 291 aa15.11■□□□□ 0.01
SHANK2-221ENST00000618363 GOLGA2Q08379 1002 aa15.11■□□□□ 0.01
SHANK2-221ENST00000618363 CC2D2BQ6DHV5 1058 aa15.11■□□□□ 0.01
SHANK2-221ENST00000618363 TRMT112Q9UI30 125 aaKnown RBP15.11■□□□□ 0.01
SHANK2-221ENST00000618363 CACNA1SQ13698 1873 aa15.11■□□□□ 0.01
SHANK2-221ENST00000618363 SLX4Q8IY92 1834 aa15.1■□□□□ 0.01
SHANK2-221ENST00000618363 NTSR2O95665 410 aa15.1■□□□□ 0.01
SHANK2-221ENST00000618363 CCDC27Q2M243 656 aa15.1■□□□□ 0.01
SHANK2-221ENST00000618363 CRY2Q49AN0 593 aa15.1■□□□□ 0.01
SHANK2-221ENST00000618363 GRIPAP1Q4V328 841 aa15.1■□□□□ 0.01
SHANK2-221ENST00000618363 CCDC30Q5VVM6 783 aa15.1■□□□□ 0.01
SHANK2-221ENST00000618363 RIC3Q7Z5B4 369 aa15.1■□□□□ 0.01
SHANK2-221ENST00000618363 ABCC12Q96J65 1359 aa15.1■□□□□ 0.01
SHANK2-221ENST00000618363 VEGFAP15692 232 aaPredicted RBP15.09■□□□□ 0.01
SHANK2-221ENST00000618363 FKBP4Q02790 459 aaKnown RBP eCLIP15.09■□□□□ 0.01
SHANK2-221ENST00000618363 NLRP10Q86W26 655 aa15.09■□□□□ 0.01
SHANK2-221ENST00000618363 CCDC88AQ3V6T2 1871 aa15.09■□□□□ 0.01
SHANK2-221ENST00000618363 SH3TC1Q8TE82 1336 aa15.09■□□□□ 0.01
SHANK2-221ENST00000618363 DDX58O95786 925 aaKnown RBP15.08■□□□□ 0
SHANK2-221ENST00000618363 HSPA6P17066 643 aa15.08■□□□□ 0
SHANK2-221ENST00000618363 HOXA10P31260 410 aaPredicted RBP15.08■□□□□ 0
SHANK2-221ENST00000618363 SLC10A5Q5PT55 438 aa15.08■□□□□ 0
SHANK2-221ENST00000618363 WWC1Q8IX03 1113 aa15.08■□□□□ 0
SHANK2-221ENST00000618363 RBM46Q8TBY0 533 aaKnown RBP15.08■□□□□ 0
SHANK2-221ENST00000618363 C7orf43Q8WVR3 580 aa15.08■□□□□ 0
SHANK2-221ENST00000618363 CRAMP1Q96RY5 1269 aa15.08■□□□□ 0
SHANK2-221ENST00000618363 STK31Q9BXU1 1019 aa15.08■□□□□ 0
SHANK2-221ENST00000618363 ARFGEF2Q9Y6D5 1785 aa15.08■□□□□ 0
SHANK2-221ENST00000618363 RIC1Q4ADV7 1423 aa15.08■□□□□ 0
SHANK2-221ENST00000618363 FER1L6Q2WGJ9 1857 aa15.08■□□□□ 0
SHANK2-221ENST00000618363 PRELPP51888 382 aa15.07■□□□□ 0
SHANK2-221ENST00000618363 FAM9BQ8IZU0 186 aa15.07■□□□□ 0
SHANK2-221ENST00000618363 SALL2Q9Y467 1007 aaPredicted RBP15.07■□□□□ 0
SHANK2-221ENST00000618363 TCERG1O14776 1098 aaKnown RBP15.06■□□□□ 0
SHANK2-221ENST00000618363 PPEF1O14829 653 aaPredicted RBP15.06■□□□□ 0
SHANK2-221ENST00000618363 HSP90B1P14625 803 aaKnown RBP15.06■□□□□ 0
SHANK2-221ENST00000618363 DDX46Q7L014 1031 aaKnown RBP15.06■□□□□ 0
SHANK2-221ENST00000618363 SYNE4Q8N205 404 aa15.06■□□□□ 0
SHANK2-221ENST00000618363 C8orf58Q8NAV2 365 aa15.06■□□□□ 0
SHANK2-221ENST00000618363 JDP2Q8WYK2 163 aa15.06■□□□□ 0
SHANK2-221ENST00000618363 TSR2Q969E8 191 aaKnown RBP15.06■□□□□ 0
SHANK2-221ENST00000618363 IL16Q14005 1332 aa15.06■□□□□ 0
SHANK2-221ENST00000618363 ATP5J2-PTCD1G3V325 749 aa15.05■□□□□ -0
SHANK2-221ENST00000618363 HCLS1P14317 486 aaPredicted RBP15.05■□□□□ -0
SHANK2-221ENST00000618363 FSTL1Q12841 308 aa15.05■□□□□ -0
SHANK2-221ENST00000618363 ZNF277Q9NRM2 450 aaPredicted RBP15.05■□□□□ -0
SHANK2-221ENST00000618363 TNRC6CQ9HCJ0 1690 aaKnown RBP15.04■□□□□ -0
SHANK2-221ENST00000618363 BBOX1O75936 387 aa15.04■□□□□ -0
SHANK2-221ENST00000618363 IARSP41252 1262 aaKnown RBP15.04■□□□□ -0
SHANK2-221ENST00000618363 OLFM4Q6UX06 510 aa15.04■□□□□ -0
SHANK2-221ENST00000618363 SMC1BQ8NDV3 1235 aa15.04■□□□□ -0
SHANK2-221ENST00000618363 PSMD1Q99460 953 aa15.04■□□□□ -0
SHANK2-221ENST00000618363 PHAXQ9H814 394 aaKnown RBP15.04■□□□□ -0
SHANK2-221ENST00000618363 ANKRD36CQ5JPF3 1778 aa15.03■□□□□ -0
SHANK2-221ENST00000618363 TIAM2Q8IVF5 1701 aa15.03■□□□□ -0
SHANK2-221ENST00000618363 APLP1P51693 650 aa15.03■□□□□ -0
SHANK2-221ENST00000618363 TWISTNBQ3B726 338 aaPredicted RBP15.03■□□□□ -0
SHANK2-221ENST00000618363 WDR63Q8IWG1 891 aa15.03■□□□□ -0
SHANK2-221ENST00000618363 ZNF428Q96B54 188 aa15.03■□□□□ -0
SHANK2-221ENST00000618363 ISCA1Q9BUE6 129 aa15.03■□□□□ -0
SHANK2-221ENST00000618363 DICER1Q9UPY3 1922 aaKnown RBP15.03■□□□□ -0
SHANK2-221ENST00000618363 IQCA1LA6NCM1 817 aa15.02■□□□□ -0
SHANK2-221ENST00000618363 DDNO94850 711 aaPredicted RBP15.02■□□□□ -0
SHANK2-221ENST00000618363 NEXNQ0ZGT2 675 aa15.02■□□□□ -0
SHANK2-221ENST00000618363 TRIM28Q13263 835 aaKnown RBP15.02■□□□□ -0
SHANK2-221ENST00000618363 RTL5Q5HYW3 569 aaPredicted RBP15.02■□□□□ -0
SHANK2-221ENST00000618363 C3orf67Q6ZVT6 689 aa15.02■□□□□ -0
SHANK2-221ENST00000618363 TSPYL6Q8N831 410 aa15.02■□□□□ -0
SHANK2-221ENST00000618363 SUPT20HQ8NEM7 779 aa15.02■□□□□ -0
SHANK2-221ENST00000618363 FAM89AQ96GI7 184 aa15.02■□□□□ -0
SHANK2-221ENST00000618363 MYD88Q99836 296 aa15.02■□□□□ -0
SHANK2-221ENST00000618363 ABCC4O15439 1325 aa15.01□□□□□ -0.01
SHANK2-221ENST00000618363 EIF6P56537 245 aaKnown RBP15.01□□□□□ -0.01
SHANK2-221ENST00000618363 TMC4Q7Z404 712 aa15.01□□□□□ -0.01
SHANK2-221ENST00000618363 LARGE2Q8N3Y3 721 aa15.01□□□□□ -0.01
SHANK2-221ENST00000618363 ATP6V0A2Q9Y487 856 aa15.01□□□□□ -0.01
SHANK2-221ENST00000618363 IRS4O14654 1257 aaPredicted RBP15□□□□□ -0.01
SHANK2-221ENST00000618363 GRAPQ13588 217 aa15□□□□□ -0.01
SHANK2-221ENST00000618363 SP8Q8IXZ3 490 aa15□□□□□ -0.01
SHANK2-221ENST00000618363 ZBTB38Q8NAP3 1195 aaPredicted RBP15□□□□□ -0.01
SHANK2-221ENST00000618363 CCDC191Q8NCU4 936 aa15□□□□□ -0.01
SHANK2-221ENST00000618363 GRAPLQ8TC17 118 aaPredicted RBP15□□□□□ -0.01
SHANK2-221ENST00000618363 MYH16Q9H6N6 1097 aa15□□□□□ -0.01
SHANK2-221ENST00000618363 CWC25Q9NXE8 425 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms