RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 GABPB1Q06547 395 aaPredicted RBP6.66□□□□□ -1.34
CPNE4-214ENST00000617767 TMEM132AQ24JP5 1023 aa6.66□□□□□ -1.34
CPNE4-214ENST00000617767 RIC3Q7Z5B4 369 aa6.66□□□□□ -1.34
CPNE4-214ENST00000617767 TTC5Q8N0Z6 440 aa6.66□□□□□ -1.34
CPNE4-214ENST00000617767 GIGYF1O75420 1035 aaPredicted RBP6.66□□□□□ -1.34
CPNE4-214ENST00000617767 ADAMTS2O95450 1211 aa6.66□□□□□ -1.34
CPNE4-214ENST00000617767 KCNA4P22459 653 aa6.66□□□□□ -1.34
CPNE4-214ENST00000617767 AMOTQ4VCS5 1084 aa6.66□□□□□ -1.34
CPNE4-214ENST00000617767 LARP1Q6PKG0 1096 aaKnown RBP6.66□□□□□ -1.34
CPNE4-214ENST00000617767 RPAP2Q8IXW5 612 aaPredicted RBP6.66□□□□□ -1.34
CPNE4-214ENST00000617767 CCDC85AQ96PX6 553 aaPredicted RBP6.66□□□□□ -1.34
CPNE4-214ENST00000617767 CHMP3Q9Y3E7 222 aa6.66□□□□□ -1.34
CPNE4-214ENST00000617767 HTATSF1O43719 755 aaKnown RBP6.65□□□□□ -1.34
CPNE4-214ENST00000617767 DHX16O60231 1041 aaKnown RBP6.65□□□□□ -1.34
CPNE4-214ENST00000617767 CABP4P57796 275 aa6.65□□□□□ -1.34
CPNE4-214ENST00000617767 PIP4K2BP78356 416 aa6.65□□□□□ -1.34
CPNE4-214ENST00000617767 BMP2KLQ5H9B9 411 aa6.65□□□□□ -1.34
CPNE4-214ENST00000617767 FOXD4L5Q5VV16 416 aaPredicted RBP6.65□□□□□ -1.34
CPNE4-214ENST00000617767 ZNF790Q6PG37 636 aa6.65□□□□□ -1.34
CPNE4-214ENST00000617767 FOXD4L4Q8WXT5 416 aaPredicted RBP6.65□□□□□ -1.34
CPNE4-214ENST00000617767 BCL2L12Q9HB09 334 aa6.65□□□□□ -1.34
CPNE4-214ENST00000617767 ZKSCAN5Q9Y2L8 839 aa6.65□□□□□ -1.34
CPNE4-214ENST00000617767 NUTM2BA6NNL0 878 aaPredicted RBP6.65□□□□□ -1.34
CPNE4-214ENST00000617767 NUTM2EB1AL46 878 aaPredicted RBP6.65□□□□□ -1.34
CPNE4-214ENST00000617767 HSP90AB1P08238 724 aaKnown RBP6.65□□□□□ -1.34
CPNE4-214ENST00000617767 ANAPC15P60006 121 aa6.65□□□□□ -1.34
CPNE4-214ENST00000617767 TTC22Q5TAA0 569 aa6.65□□□□□ -1.34
CPNE4-214ENST00000617767 COPS6Q7L5N1 327 aa6.65□□□□□ -1.34
CPNE4-214ENST00000617767 UNC5CLQ8IV45 518 aa6.65□□□□□ -1.34
CPNE4-214ENST00000617767 NUTM2AQ8IVF1 878 aaPredicted RBP6.65□□□□□ -1.34
CPNE4-214ENST00000617767 CALR3Q96L12 384 aaKnown RBP6.65□□□□□ -1.34
CPNE4-214ENST00000617767 MEGF6O75095 1541 aa6.65□□□□□ -1.34
CPNE4-214ENST00000617767 GNAI3P08754 354 aa6.65□□□□□ -1.35
CPNE4-214ENST00000617767 PHKG2P15735 406 aa6.65□□□□□ -1.35
CPNE4-214ENST00000617767 HSCBQ8IWL3 235 aa6.65□□□□□ -1.35
CPNE4-214ENST00000617767 XAGE3Q8WTP9 111 aa6.65□□□□□ -1.35
CPNE4-214ENST00000617767 LRRCC1Q9C099 1032 aa6.65□□□□□ -1.35
CPNE4-214ENST00000617767 SOS1Q07889 1333 aaPredicted RBP6.65□□□□□ -1.35
CPNE4-214ENST00000617767 MED1Q15648 1581 aaPredicted RBP6.65□□□□□ -1.35
CPNE4-214ENST00000617767 CDC45O75419 566 aa6.64□□□□□ -1.35
CPNE4-214ENST00000617767 FAM212AQ96EL1 285 aa6.64□□□□□ -1.35
CPNE4-214ENST00000617767 MYD88Q99836 296 aa6.64□□□□□ -1.35
CPNE4-214ENST00000617767 LARP6Q9BRS8 491 aaKnown RBP6.64□□□□□ -1.35
CPNE4-214ENST00000617767 DBF4Q9UBU7 674 aaPredicted RBP6.64□□□□□ -1.35
CPNE4-214ENST00000617767 DDX11L8A8MPP1 907 aa6.64□□□□□ -1.35
CPNE4-214ENST00000617767 PDE1AP54750 535 aa6.64□□□□□ -1.35
CPNE4-214ENST00000617767 GYS2P54840 703 aa6.64□□□□□ -1.35
CPNE4-214ENST00000617767 IFNL2Q8IZJ0 200 aa6.64□□□□□ -1.35
CPNE4-214ENST00000617767 OGFRQ9NZT2 677 aa6.64□□□□□ -1.35
CPNE4-214ENST00000617767 SPG7Q9UQ90 795 aa6.64□□□□□ -1.35
CPNE4-214ENST00000617767 NDUFB9Q9Y6M9 179 aa6.64□□□□□ -1.35
CPNE4-214ENST00000617767 SPATA31A3Q5VYP0 1347 aa6.64□□□□□ -1.35
CPNE4-214ENST00000617767 CEMIPQ8WUJ3 1361 aa6.64□□□□□ -1.35
CPNE4-214ENST00000617767 TDO2P48775 406 aa6.64□□□□□ -1.35
CPNE4-214ENST00000617767 HS1BP3Q53T59 392 aa6.64□□□□□ -1.35
CPNE4-214ENST00000617767 ICE2Q659A1 982 aa6.64□□□□□ -1.35
CPNE4-214ENST00000617767 SLC52A2Q9HAB3 445 aa6.64□□□□□ -1.35
CPNE4-214ENST00000617767 A1BGP04217 495 aa6.63□□□□□ -1.35
CPNE4-214ENST00000617767 MX1P20591 662 aa6.63□□□□□ -1.35
CPNE4-214ENST00000617767 TERF2Q15554 542 aa6.63□□□□□ -1.35
CPNE4-214ENST00000617767 FOXD4L6Q3SYB3 417 aaPredicted RBP6.63□□□□□ -1.35
CPNE4-214ENST00000617767 BEND3Q5T5X7 828 aa6.63□□□□□ -1.35
CPNE4-214ENST00000617767 FOXD4L3Q6VB84 417 aaPredicted RBP6.63□□□□□ -1.35
CPNE4-214ENST00000617767 ZBTB3Q9H5J0 574 aa6.63□□□□□ -1.35
CPNE4-214ENST00000617767 BTG4Q9NY30 223 aa6.63□□□□□ -1.35
CPNE4-214ENST00000617767 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.63□□□□□ -1.35
CPNE4-214ENST00000617767 ADCY9O60503 1353 aa6.63□□□□□ -1.35
CPNE4-214ENST00000617767 RBM25P49756 843 aaKnown RBP6.63□□□□□ -1.35
CPNE4-214ENST00000617767 ATP8B2P98198 1209 aa6.63□□□□□ -1.35
CPNE4-214ENST00000617767 CCDC8Q9H0W5 538 aaPredicted RBP6.63□□□□□ -1.35
CPNE4-214ENST00000617767 ANO2Q9NQ90 1003 aa6.63□□□□□ -1.35
CPNE4-214ENST00000617767 ARID4AP29374 1257 aaPredicted RBP6.63□□□□□ -1.35
CPNE4-214ENST00000617767 ZNF513Q8N8E2 541 aaPredicted RBP6.63□□□□□ -1.35
CPNE4-214ENST00000617767 CHMP5Q9NZZ3 219 aa6.63□□□□□ -1.35
CPNE4-214ENST00000617767 KIF24Q5T7B8 1368 aa6.62□□□□□ -1.35
CPNE4-214ENST00000617767 RAD51AP2Q09MP3 1159 aa6.62□□□□□ -1.35
CPNE4-214ENST00000617767 UBE3BQ7Z3V4 1068 aa6.62□□□□□ -1.35
CPNE4-214ENST00000617767 NBPF11Q86T75 865 aa6.62□□□□□ -1.35
CPNE4-214ENST00000617767 FEZ1Q99689 392 aa6.62□□□□□ -1.35
CPNE4-214ENST00000617767 IL25Q9H293 177 aa6.62□□□□□ -1.35
CPNE4-214ENST00000617767 BICC1Q9H694 974 aaKnown RBP6.62□□□□□ -1.35
CPNE4-214ENST00000617767 ZCRB1Q8TBF4 217 aaKnown RBP6.62□□□□□ -1.35
CPNE4-214ENST00000617767 SUCLG2Q96I99 432 aa6.62□□□□□ -1.35
CPNE4-214ENST00000617767 CHAMP1Q96JM3 812 aa6.62□□□□□ -1.35
CPNE4-214ENST00000617767 FAM208AQ9UK61 1670 aaKnown RBP6.62□□□□□ -1.35
CPNE4-214ENST00000617767 KDM6AO15550 1401 aaPredicted RBP6.62□□□□□ -1.35
CPNE4-214ENST00000617767 TNS3Q68CZ2 1445 aa6.62□□□□□ -1.35
CPNE4-214ENST00000617767 TRPM3Q9HCF6 1732 aaPredicted RBP6.62□□□□□ -1.35
CPNE4-214ENST00000617767 HMGB1P09429 215 aaKnown RBP6.62□□□□□ -1.35
CPNE4-214ENST00000617767 GUCY2CP25092 1073 aa6.62□□□□□ -1.35
CPNE4-214ENST00000617767 HNRNPH2P55795 449 aaKnown RBP6.62□□□□□ -1.35
CPNE4-214ENST00000617767 HMGN5P82970 282 aaKnown RBP6.62□□□□□ -1.35
CPNE4-214ENST00000617767 PRIMPOLQ96LW4 560 aa6.62□□□□□ -1.35
CPNE4-214ENST00000617767 RAI14Q9P0K7 980 aa6.62□□□□□ -1.35
CPNE4-214ENST00000617767 TTC36A6NLP5 189 aa6.61□□□□□ -1.35
CPNE4-214ENST00000617767 CWC27Q6UX04 472 aaKnown RBP6.61□□□□□ -1.35
CPNE4-214ENST00000617767 KSR2Q6VAB6 950 aa6.61□□□□□ -1.35
CPNE4-214ENST00000617767 TTLL7Q6ZT98 887 aa6.61□□□□□ -1.35
CPNE4-214ENST00000617767 RHPN1Q8TCX5 695 aa6.61□□□□□ -1.35
CPNE4-214ENST00000617767 BORCS6Q96GS4 357 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms