RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 MED14O60244 1454 aa3.97□□□□□ -1.77
LPP-220ENST00000617246 NUTM1Q86Y26 1132 aa3.97□□□□□ -1.77
LPP-220ENST00000617246 MYO6Q9UM54 1294 aa3.97□□□□□ -1.77
LPP-220ENST00000617246 ALS2Q96Q42 1657 aa3.97□□□□□ -1.77
LPP-220ENST00000617246 TYW5A2RUC4 315 aaKnown RBP3.97□□□□□ -1.77
LPP-220ENST00000617246 PNMA8AQ86V59 439 aaPredicted RBP3.97□□□□□ -1.77
LPP-220ENST00000617246 FAM193BQ96PV7 902 aaPredicted RBP3.97□□□□□ -1.77
LPP-220ENST00000617246 STXBP4Q6ZWJ1 553 aa3.97□□□□□ -1.77
LPP-220ENST00000617246 CCDC12Q8WUD4 166 aaPredicted RBP3.97□□□□□ -1.77
LPP-220ENST00000617246 BSDC1Q9NW68 430 aaPredicted RBP3.97□□□□□ -1.77
LPP-220ENST00000617246 ATP10DQ9P241 1426 aa3.97□□□□□ -1.77
LPP-220ENST00000617246 BTBD11A6QL63 1104 aa3.97□□□□□ -1.77
LPP-220ENST00000617246 SALL2Q9Y467 1007 aaPredicted RBP3.97□□□□□ -1.77
LPP-220ENST00000617246 CCDC85CA6NKD9 419 aa3.97□□□□□ -1.77
LPP-220ENST00000617246 DKC1O60832 514 aaKnown RBP eCLIP3.97□□□□□ -1.771e-5■■■■□ 25.7
LPP-220ENST00000617246 ZC3H6P61129 1189 aaKnown RBP3.97□□□□□ -1.77
LPP-220ENST00000617246 TMC4Q7Z404 712 aa3.97□□□□□ -1.77
LPP-220ENST00000617246 REREQ9P2R6 1566 aa3.96□□□□□ -1.77
LPP-220ENST00000617246 PRDM15P57071 1507 aaPredicted RBP3.96□□□□□ -1.77
LPP-220ENST00000617246 USP32Q8NFA0 1604 aa3.96□□□□□ -1.77
LPP-220ENST00000617246 KIAA1107Q9UPP5 1409 aa3.96□□□□□ -1.77
LPP-220ENST00000617246 KCNA6P17658 529 aa3.96□□□□□ -1.77
LPP-220ENST00000617246 CCDC30Q5VVM6 783 aa3.96□□□□□ -1.77
LPP-220ENST00000617246 NUDT18Q6ZVK8 323 aa3.96□□□□□ -1.77
LPP-220ENST00000617246 PARD3Q8TEW0 1356 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 CPLX1O14810 134 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 PLS1Q14651 629 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 TCP11L2Q8N4U5 519 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 PNMA2Q9UL42 364 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 FANCIQ9NVI1 1328 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 ARHGEF37A1IGU5 675 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 C1orf228Q6PIY5 440 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 RAB34Q9BZG1 259 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 LRFN2Q9ULH4 789 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 POLR3DP05423 398 aaPredicted RBP3.96□□□□□ -1.78
LPP-220ENST00000617246 IREB2P48200 963 aaKnown RBP3.96□□□□□ -1.78
LPP-220ENST00000617246 SLC16A10Q8TF71 515 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 TFIP11Q9UBB9 837 aaKnown RBP3.96□□□□□ -1.78
LPP-220ENST00000617246 MRPS9P82933 396 aaKnown RBP3.96□□□□□ -1.78
LPP-220ENST00000617246 USP37Q86T82 979 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 PODXL2Q9NZ53 605 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 PIM2Q9P1W9 311 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 ANKRD18BA2A2Z9 1011 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 CNGA1P29973 690 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 RSPH3Q86UC2 560 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 KIDINS220Q9ULH0 1771 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 VIRMAQ69YN4 1812 aaKnown RBP3.96□□□□□ -1.78
LPP-220ENST00000617246 PPIP5K2O43314 1243 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 APLP1P51693 650 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 NONOQ15233 471 aaKnown RBP eCLIP3.96□□□□□ -1.78
LPP-220ENST00000617246 RAET1EQ8TD07 263 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 RNF181Q9P0P0 153 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 DCCP43146 1447 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 KBTBD13C9JR72 458 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 GNPATO15228 680 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 PLCG2P16885 1265 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 ZCRB1Q8TBF4 217 aaKnown RBP3.96□□□□□ -1.78
LPP-220ENST00000617246 ACSBG1Q96GR2 724 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 PRAM1Q96QH2 718 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 MYOM2P54296 1465 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 MAP2K1Q02750 393 aaPredicted RBP3.96□□□□□ -1.78
LPP-220ENST00000617246 TCHPQ9BT92 498 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 MFSD1Q9H3U5 465 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 TNS3Q68CZ2 1445 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 ANKRD36BQ8N2N9 1353 aa3.96□□□□□ -1.78
LPP-220ENST00000617246 SLC27A3Q5K4L6 730 aa3.95□□□□□ -1.78
LPP-220ENST00000617246 ARID3AQ99856 593 aa3.95□□□□□ -1.78
LPP-220ENST00000617246 WDR17Q8IZU2 1322 aa3.95□□□□□ -1.78
LPP-220ENST00000617246 ANKRD2Q9GZV1 360 aa3.95□□□□□ -1.78
LPP-220ENST00000617246 IPO7O95373 1038 aaKnown RBP3.95□□□□□ -1.78
LPP-220ENST00000617246 AIMP1Q12904 312 aaKnown RBP3.95□□□□□ -1.78
LPP-220ENST00000617246 APOBEC3FQ8IUX4 373 aaKnown RBP3.95□□□□□ -1.78
LPP-220ENST00000617246 ABI1Q8IZP0 508 aa3.95□□□□□ -1.78
LPP-220ENST00000617246 NEUROD6Q96NK8 337 aa3.95□□□□□ -1.78
LPP-220ENST00000617246 IPO9Q96P70 1041 aaKnown RBP3.95□□□□□ -1.78
LPP-220ENST00000617246 DIAPH3Q9NSV4 1193 aa3.95□□□□□ -1.78
LPP-220ENST00000617246 HCN4Q9Y3Q4 1203 aa3.95□□□□□ -1.78
LPP-220ENST00000617246 ALDH1A1P00352 501 aa3.95□□□□□ -1.78
LPP-220ENST00000617246 CC2D2BQ6DHV5 1058 aa3.95□□□□□ -1.78
LPP-220ENST00000617246 PDCL3Q9H2J4 239 aa3.95□□□□□ -1.78
LPP-220ENST00000617246 CCDC70Q6NSX1 233 aa3.95□□□□□ -1.78
LPP-220ENST00000617246 GTF3C6Q969F1 213 aa3.95□□□□□ -1.78
LPP-220ENST00000617246 TCERG1O14776 1098 aaKnown RBP3.95□□□□□ -1.78
LPP-220ENST00000617246 GIGYF2Q6Y7W6 1299 aaKnown RBP3.95□□□□□ -1.78
LPP-220ENST00000617246 ZFYVE27Q5T4F4 411 aa3.95□□□□□ -1.78
LPP-220ENST00000617246 DPP8Q6V1X1 898 aaPredicted RBP3.95□□□□□ -1.78
LPP-220ENST00000617246 MKNK2Q9HBH9 465 aa3.95□□□□□ -1.78
LPP-220ENST00000617246 CIZ1Q9ULV3 898 aaPredicted RBP3.95□□□□□ -1.78
LPP-220ENST00000617246 SF3A1Q15459 793 aaKnown RBP3.95□□□□□ -1.78
LPP-220ENST00000617246 RRP12Q5JTH9 1297 aaKnown RBP3.95□□□□□ -1.78
LPP-220ENST00000617246 HS6ST3Q8IZP7 471 aa3.95□□□□□ -1.78
LPP-220ENST00000617246 ERO1AQ96HE7 468 aa3.95□□□□□ -1.78
LPP-220ENST00000617246 COMMD10Q9Y6G5 202 aa3.95□□□□□ -1.78
LPP-220ENST00000617246 SLU7O95391 586 aaKnown RBP3.95□□□□□ -1.78
LPP-220ENST00000617246 ZKSCAN1P17029 563 aaPredicted RBP3.95□□□□□ -1.78
LPP-220ENST00000617246 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.95□□□□□ -1.78
LPP-220ENST00000617246 HNRNPUQ00839 825 aaKnown RBP eCLIP3.95□□□□□ -1.78
LPP-220ENST00000617246 TIMELESSQ9UNS1 1208 aa3.95□□□□□ -1.78
LPP-220ENST00000617246 RIOK3O14730 519 aaKnown RBP3.95□□□□□ -1.78
LPP-220ENST00000617246 NLGN1Q8N2Q7 840 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms