RNA–Protein interactions for RNA: ENST00000616294.1

AC003001.2-201, humanhuman

BASIC

Gene AC003001.2, Length 831 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.2-201ENST00000616294 GPR25O00155 361 aa10.6□□□□□ -0.71
AC003001.2-201ENST00000616294 DNM1Q05193 864 aaKnown RBP10.6□□□□□ -0.71
AC003001.2-201ENST00000616294 ATCAYQ86WG3 371 aa10.6□□□□□ -0.71
AC003001.2-201ENST00000616294 RGL4Q8IZJ4 473 aa10.6□□□□□ -0.71
AC003001.2-201ENST00000616294 CMTR1Q8N1G2 835 aaKnown RBP10.6□□□□□ -0.71
AC003001.2-201ENST00000616294 GPR152Q8TDT2 470 aa10.6□□□□□ -0.71
AC003001.2-201ENST00000616294 NDFIP2Q9NV92 336 aa10.6□□□□□ -0.71
AC003001.2-201ENST00000616294 MARK1Q9P0L2 795 aa10.6□□□□□ -0.71
AC003001.2-201ENST00000616294 RTCBQ9Y3I0 505 aaKnown RBP10.6□□□□□ -0.71
AC003001.2-201ENST00000616294 NDUFB5O43674 189 aa10.59□□□□□ -0.71
AC003001.2-201ENST00000616294 RPLP1P05386 114 aaKnown RBP10.59□□□□□ -0.71
AC003001.2-201ENST00000616294 EDEM1Q92611 657 aa10.59□□□□□ -0.71
AC003001.2-201ENST00000616294 FGFR3P22607 806 aa10.58□□□□□ -0.72
AC003001.2-201ENST00000616294 MZF1P28698 734 aaPredicted RBP10.58□□□□□ -0.72
AC003001.2-201ENST00000616294 ARHGAP4P98171 946 aa10.58□□□□□ -0.72
AC003001.2-201ENST00000616294 SFSWAPQ12872 951 aaKnown RBP10.58□□□□□ -0.72
AC003001.2-201ENST00000616294 ECM1Q16610 540 aa10.58□□□□□ -0.72
AC003001.2-201ENST00000616294 TMCO4Q5TGY1 634 aa10.58□□□□□ -0.72
AC003001.2-201ENST00000616294 IRF7Q92985 503 aa10.58□□□□□ -0.72
AC003001.2-201ENST00000616294 FNDC3AQ9Y2H6 1198 aaKnown RBP10.58□□□□□ -0.72
AC003001.2-201ENST00000616294 EFSO43281 561 aa10.57□□□□□ -0.72
AC003001.2-201ENST00000616294 USP5P45974 858 aa10.57□□□□□ -0.72
AC003001.2-201ENST00000616294 KCNQ4P56696 695 aa10.57□□□□□ -0.72
AC003001.2-201ENST00000616294 FZD6O60353 706 aa10.56□□□□□ -0.72
AC003001.2-201ENST00000616294 TMC1Q8TDI8 760 aa10.56□□□□□ -0.72
AC003001.2-201ENST00000616294 CCDC87Q9NVE4 849 aa10.56□□□□□ -0.72
AC003001.2-201ENST00000616294 DCTN4Q9UJW0 460 aa10.56□□□□□ -0.72
AC003001.2-201ENST00000616294 POLIQ9UNA4 740 aa10.56□□□□□ -0.72
AC003001.2-201ENST00000616294 NSFL1CQ9UNZ2 370 aaKnown RBP10.56□□□□□ -0.72
AC003001.2-201ENST00000616294 USP20Q9Y2K6 914 aa10.56□□□□□ -0.72
AC003001.2-201ENST00000616294 CD33P20138 364 aa10.55□□□□□ -0.72
AC003001.2-201ENST00000616294 MARSP56192 900 aaKnown RBP10.55□□□□□ -0.72
AC003001.2-201ENST00000616294 CCDC27Q2M243 656 aa10.55□□□□□ -0.72
AC003001.2-201ENST00000616294 GPR161Q8N6U8 529 aaKnown RBP10.55□□□□□ -0.72
AC003001.2-201ENST00000616294 NUDT16Q96DE0 195 aaKnown RBP10.55□□□□□ -0.72
AC003001.2-201ENST00000616294 C11orf16Q9NQ32 467 aa10.55□□□□□ -0.72
AC003001.2-201ENST00000616294 PRR12Q9ULL5 1215 aa10.55□□□□□ -0.72
AC003001.2-201ENST00000616294 PDGFAP04085 211 aa10.54□□□□□ -0.72
AC003001.2-201ENST00000616294 VSIG8P0DPA2 414 aa10.54□□□□□ -0.72
AC003001.2-201ENST00000616294 BMP4P12644 408 aa10.54□□□□□ -0.72
AC003001.2-201ENST00000616294 MX2P20592 715 aa10.54□□□□□ -0.72
AC003001.2-201ENST00000616294 MAPK1P28482 360 aa10.54□□□□□ -0.72
AC003001.2-201ENST00000616294 NFX1Q12986 1120 aaKnown RBP10.54□□□□□ -0.72
AC003001.2-201ENST00000616294 NEUROD1Q13562 356 aa10.54□□□□□ -0.72
AC003001.2-201ENST00000616294 C8orf34Q49A92 452 aa10.54□□□□□ -0.72
AC003001.2-201ENST00000616294 CITED4Q96RK1 184 aa10.54□□□□□ -0.72
AC003001.2-201ENST00000616294 STRN4Q9NRL3 753 aa10.54□□□□□ -0.72
AC003001.2-201ENST00000616294 UBAP1LF5GYI3 381 aa10.53□□□□□ -0.72
AC003001.2-201ENST00000616294 XYLBO75191 536 aa10.53□□□□□ -0.72
AC003001.2-201ENST00000616294 CTBSQ01459 385 aa10.53□□□□□ -0.72
AC003001.2-201ENST00000616294 CCINQ13939 588 aa10.53□□□□□ -0.72
AC003001.2-201ENST00000616294 FAM182BQ5T319 152 aa10.53□□□□□ -0.72
AC003001.2-201ENST00000616294 PNMA5Q96PV4 448 aa10.53□□□□□ -0.72
AC003001.2-201ENST00000616294 EHHADHQ08426 723 aa10.52□□□□□ -0.73
AC003001.2-201ENST00000616294 SPEM2Q0P670 501 aa10.52□□□□□ -0.73
AC003001.2-201ENST00000616294 PDE3BQ13370 1112 aa10.52□□□□□ -0.73
AC003001.2-201ENST00000616294 ZSCAN29Q8IWY8 852 aaPredicted RBP10.52□□□□□ -0.73
AC003001.2-201ENST00000616294 COL25A1Q9BXS0 654 aaPredicted RBP10.52□□□□□ -0.73
AC003001.2-201ENST00000616294 ERBB4Q15303 1308 aa10.52□□□□□ -0.73
AC003001.2-201ENST00000616294 WFS1O76024 890 aa10.51□□□□□ -0.73
AC003001.2-201ENST00000616294 ZNF775Q96BV0 537 aaPredicted RBP10.51□□□□□ -0.73
AC003001.2-201ENST00000616294 MBIPQ9NS73 344 aa10.51□□□□□ -0.73
AC003001.2-201ENST00000616294 KCNMB2Q9Y691 235 aa10.51□□□□□ -0.73
AC003001.2-201ENST00000616294 GSX2Q9BZM3 304 aa10.5□□□□□ -0.73
AC003001.2-201ENST00000616294 EFCC1Q9HA90 598 aa10.5□□□□□ -0.73
AC003001.2-201ENST00000616294 EGFRP00533 1210 aa10.49□□□□□ -0.73
AC003001.2-201ENST00000616294 GRNP28799 593 aaKnown RBP10.49□□□□□ -0.73
AC003001.2-201ENST00000616294 MAP2K3P46734 347 aa10.49□□□□□ -0.73
AC003001.2-201ENST00000616294 GAS6Q14393 721 aa10.49□□□□□ -0.73
AC003001.2-201ENST00000616294 KRT25Q7Z3Z0 450 aa10.49□□□□□ -0.73
AC003001.2-201ENST00000616294 SLC30A3Q99726 388 aa10.49□□□□□ -0.73
AC003001.2-201ENST00000616294 RBCK1Q9BYM8 510 aa10.49□□□□□ -0.73
AC003001.2-201ENST00000616294 GGNBP2Q9H3C7 697 aa10.49□□□□□ -0.73
AC003001.2-201ENST00000616294 PODXL2Q9NZ53 605 aa10.49□□□□□ -0.73
AC003001.2-201ENST00000616294 SASH3O75995 380 aa10.48□□□□□ -0.73
AC003001.2-201ENST00000616294 ZNF438Q7Z4V0 828 aa10.48□□□□□ -0.73
AC003001.2-201ENST00000616294 NLRP13Q86W25 1043 aa10.48□□□□□ -0.73
AC003001.2-201ENST00000616294 BHMTQ93088 406 aa10.48□□□□□ -0.73
AC003001.2-201ENST00000616294 CNTNAP3BQ96NU0 1288 aa10.48□□□□□ -0.73
AC003001.2-201ENST00000616294 CNTNAP3Q9BZ76 1288 aa10.48□□□□□ -0.73
AC003001.2-201ENST00000616294 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.48□□□□□ -0.73
AC003001.2-201ENST00000616294 NEFLP07196 543 aa10.47□□□□□ -0.73
AC003001.2-201ENST00000616294 GRIN2CQ14957 1233 aa10.47□□□□□ -0.73
AC003001.2-201ENST00000616294 TTC39BQ5VTQ0 682 aaPredicted RBP10.47□□□□□ -0.73
AC003001.2-201ENST00000616294 PDE12Q6L8Q7 609 aaKnown RBP10.47□□□□□ -0.73
AC003001.2-201ENST00000616294 GJD3Q8N144 294 aa10.47□□□□□ -0.73
AC003001.2-201ENST00000616294 HCN2Q9UL51 889 aa10.47□□□□□ -0.73
AC003001.2-201ENST00000616294 C2CD2LO14523 706 aa10.46□□□□□ -0.73
AC003001.2-201ENST00000616294 RARAP10276 462 aa10.46□□□□□ -0.73
AC003001.2-201ENST00000616294 TARSP26639 723 aaKnown RBP10.46□□□□□ -0.73
AC003001.2-201ENST00000616294 MFAP1P55081 439 aaKnown RBP10.46□□□□□ -0.73
AC003001.2-201ENST00000616294 TRIP4Q15650 581 aaPredicted RBP10.46□□□□□ -0.73
AC003001.2-201ENST00000616294 TREML4Q6UXN2 200 aa10.46□□□□□ -0.73
AC003001.2-201ENST00000616294 DMRTB1Q96MA1 342 aa10.46□□□□□ -0.73
AC003001.2-201ENST00000616294 ELP3Q9H9T3 547 aa10.46□□□□□ -0.73
AC003001.2-201ENST00000616294 CCDC9Q9Y3X0 531 aaKnown RBP10.46□□□□□ -0.73
AC003001.2-201ENST00000616294 IGF1RP08069 1367 aa10.45□□□□□ -0.74
AC003001.2-201ENST00000616294 NFKB1P19838 968 aa10.45□□□□□ -0.74
AC003001.2-201ENST00000616294 RNFT1Q5M7Z0 435 aa10.45□□□□□ -0.74
AC003001.2-201ENST00000616294 XKR5Q6UX68 686 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms