RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 SALL3Q9BXA9 1300 aa15.54■□□□□ 0.08
MSH6-214ENST00000616033 PTPN21Q16825 1174 aa15.54■□□□□ 0.08
MSH6-214ENST00000616033 KMT5BQ4FZB7 885 aa15.54■□□□□ 0.08
MSH6-214ENST00000616033 USP32Q8NFA0 1604 aa15.54■□□□□ 0.08
MSH6-214ENST00000616033 CTIFO43310 598 aaKnown RBP15.53■□□□□ 0.08
MSH6-214ENST00000616033 PI4K2BQ8TCG2 481 aa15.53■□□□□ 0.08
MSH6-214ENST00000616033 AACSQ86V21 672 aa15.53■□□□□ 0.08
MSH6-214ENST00000616033 EDC3Q96F86 508 aaKnown RBP15.53■□□□□ 0.08
MSH6-214ENST00000616033 NEXMIFQ5QGS0 1516 aa15.53■□□□□ 0.08
MSH6-214ENST00000616033 PPLO60437 1756 aa15.53■□□□□ 0.08
MSH6-214ENST00000616033 KIF24Q5T7B8 1368 aa15.53■□□□□ 0.08
MSH6-214ENST00000616033 CLASRPQ8N2M8 674 aaKnown RBP15.53■□□□□ 0.08
MSH6-214ENST00000616033 PIK3C2BO00750 1634 aa15.52■□□□□ 0.08
MSH6-214ENST00000616033 IFT172Q9UG01 1749 aa15.52■□□□□ 0.08
MSH6-214ENST00000616033 PI4KAP2A4QPH2 592 aa15.52■□□□□ 0.08
MSH6-214ENST00000616033 ST3GAL1Q11201 340 aa15.52■□□□□ 0.08
MSH6-214ENST00000616033 KRT222Q8N1A0 295 aa15.52■□□□□ 0.08
MSH6-214ENST00000616033 PI4KAP1Q8N8J0 262 aa15.52■□□□□ 0.08
MSH6-214ENST00000616033 KIF18AQ8NI77 898 aa15.52■□□□□ 0.08
MSH6-214ENST00000616033 KIF1BPQ96EK5 621 aa15.52■□□□□ 0.08
MSH6-214ENST00000616033 FBXO38Q6PIJ6 1188 aa15.52■□□□□ 0.07
MSH6-214ENST00000616033 C11orf57Q6ZUT1 292 aaPredicted RBP15.52■□□□□ 0.07
MSH6-214ENST00000616033 TOMM22Q9NS69 142 aa15.52■□□□□ 0.07
MSH6-214ENST00000616033 BIN1O00499 593 aa15.52■□□□□ 0.07
MSH6-214ENST00000616033 ERCC6LQ2NKX8 1250 aa15.52■□□□□ 0.07
MSH6-214ENST00000616033 BLOC1S2Q6QNY1 142 aa15.52■□□□□ 0.07
MSH6-214ENST00000616033 HOMER1Q86YM7 354 aa15.52■□□□□ 0.07
MSH6-214ENST00000616033 C9orf78Q9NZ63 289 aaPredicted RBP15.52■□□□□ 0.07
MSH6-214ENST00000616033 CCDC69A6NI79 296 aa15.51■□□□□ 0.07
MSH6-214ENST00000616033 AIMP1Q12904 312 aaKnown RBP15.51■□□□□ 0.07
MSH6-214ENST00000616033 RUFY2Q8WXA3 655 aa15.51■□□□□ 0.07
MSH6-214ENST00000616033 FSD1Q9BTV5 496 aa15.51■□□□□ 0.07
MSH6-214ENST00000616033 STAP2Q9UGK3 403 aa15.51■□□□□ 0.07
MSH6-214ENST00000616033 DDX41Q9UJV9 622 aaKnown RBP15.51■□□□□ 0.07
MSH6-214ENST00000616033 APPP05067 770 aa15.51■□□□□ 0.07
MSH6-214ENST00000616033 SLFN14P0C7P3 912 aa15.51■□□□□ 0.07
MSH6-214ENST00000616033 LEO1Q8WVC0 666 aaPredicted RBP15.51■□□□□ 0.07
MSH6-214ENST00000616033 SMC2O95347 1197 aa15.5■□□□□ 0.07
MSH6-214ENST00000616033 HDGFP51858 240 aaKnown RBP15.5■□□□□ 0.07
MSH6-214ENST00000616033 CREB3L3Q68CJ9 461 aa15.5■□□□□ 0.07
MSH6-214ENST00000616033 KLHDC4Q8TBB5 520 aa15.5■□□□□ 0.07
MSH6-214ENST00000616033 PTPRMP28827 1452 aa15.5■□□□□ 0.07
MSH6-214ENST00000616033 TNRQ92752 1358 aa15.5■□□□□ 0.07
MSH6-214ENST00000616033 CHGBP05060 677 aa15.5■□□□□ 0.07
MSH6-214ENST00000616033 NMIQ13287 307 aaPredicted RBP15.5■□□□□ 0.07
MSH6-214ENST00000616033 ZRSR1Q15695 479 aaKnown RBP15.49■□□□□ 0.07
MSH6-214ENST00000616033 DLG5Q8TDM6 1919 aa15.49■□□□□ 0.07
MSH6-214ENST00000616033 LRRN4CLQ8ND94 238 aa15.49■□□□□ 0.07
MSH6-214ENST00000616033 BRF1Q92994 677 aa15.49■□□□□ 0.07
MSH6-214ENST00000616033 PGBD1Q96JS3 809 aa15.49■□□□□ 0.07
MSH6-214ENST00000616033 PAXBP1Q9Y5B6 917 aa15.49■□□□□ 0.07
MSH6-214ENST00000616033 EID1Q9Y6B2 187 aa15.49■□□□□ 0.07
MSH6-214ENST00000616033 KIAA0232Q92628 1395 aa15.49■□□□□ 0.07
MSH6-214ENST00000616033 TERF2Q15554 542 aa15.49■□□□□ 0.07
MSH6-214ENST00000616033 SYT10Q6XYQ8 523 aa15.49■□□□□ 0.07
MSH6-214ENST00000616033 LRRC8AQ8IWT6 810 aa15.49■□□□□ 0.07
MSH6-214ENST00000616033 MYO5BQ9ULV0 1848 aa15.48■□□□□ 0.07
MSH6-214ENST00000616033 CCT2P78371 535 aaKnown RBP15.48■□□□□ 0.07
MSH6-214ENST00000616033 VPS53Q5VIR6 699 aa15.48■□□□□ 0.07
MSH6-214ENST00000616033 AOPEPQ8N6M6 819 aa15.48■□□□□ 0.07
MSH6-214ENST00000616033 CCAR2Q8N163 923 aaKnown RBP15.48■□□□□ 0.07
MSH6-214ENST00000616033 ZSCAN31Q96LW9 406 aaPredicted RBP15.48■□□□□ 0.07
MSH6-214ENST00000616033 EYA1Q99502 592 aa15.48■□□□□ 0.07
MSH6-214ENST00000616033 CHPF2Q9P2E5 772 aa15.48■□□□□ 0.07
MSH6-214ENST00000616033 GLRX3O76003 335 aaKnown RBP15.48■□□□□ 0.07
MSH6-214ENST00000616033 HSP90AA4PQ58FG1 418 aa15.48■□□□□ 0.07
MSH6-214ENST00000616033 TIGD1Q96MW7 591 aa15.48■□□□□ 0.07
MSH6-214ENST00000616033 SDF4Q9BRK5 362 aa15.48■□□□□ 0.07
MSH6-214ENST00000616033 SH2B1Q9NRF2 756 aaPredicted RBP15.48■□□□□ 0.07
MSH6-214ENST00000616033 ACEP12821 1306 aa15.47■□□□□ 0.07
MSH6-214ENST00000616033 A2ML1A8K2U0 1454 aa15.47■□□□□ 0.07
MSH6-214ENST00000616033 ZNF397Q8NF99 534 aaPredicted RBP15.47■□□□□ 0.07
MSH6-214ENST00000616033 SCAND2PQ9GZW5 306 aaPredicted RBP15.47■□□□□ 0.07
MSH6-214ENST00000616033 EPC1Q9H2F5 836 aa15.47■□□□□ 0.07
MSH6-214ENST00000616033 ME1P48163 572 aa15.47■□□□□ 0.07
MSH6-214ENST00000616033 GNL2Q13823 731 aaKnown RBP15.47■□□□□ 0.07
MSH6-214ENST00000616033 CWF19L2Q2TBE0 894 aaKnown RBP15.47■□□□□ 0.07
MSH6-214ENST00000616033 NGDNQ8NEJ9 315 aaKnown RBP15.47■□□□□ 0.07
MSH6-214ENST00000616033 PPP6R1Q9UPN7 881 aa15.47■□□□□ 0.07
MSH6-214ENST00000616033 CLTCQ00610 1675 aaKnown RBP15.47■□□□□ 0.07
MSH6-214ENST00000616033 CCAR1Q8IX12 1150 aaKnown RBP15.46■□□□□ 0.07
MSH6-214ENST00000616033 SSH3Q8TE77 659 aa15.46■□□□□ 0.07
MSH6-214ENST00000616033 AMOTL2Q9Y2J4 779 aa15.46■□□□□ 0.07
MSH6-214ENST00000616033 CCDC129Q6ZRS4 1044 aa15.46■□□□□ 0.07
MSH6-214ENST00000616033 EP400NLQ6ZTU2 488 aa15.46■□□□□ 0.07
MSH6-214ENST00000616033 RAB11FIP4Q86YS3 637 aa15.46■□□□□ 0.07
MSH6-214ENST00000616033 CLSTN2Q9H4D0 955 aa15.46■□□□□ 0.07
MSH6-214ENST00000616033 DDX19AQ9NUU7 478 aaKnown RBP15.46■□□□□ 0.07
MSH6-214ENST00000616033 CCDC66A2RUB6 948 aa15.46■□□□□ 0.06
MSH6-214ENST00000616033 KCNQ3O43525 872 aa15.46■□□□□ 0.06
MSH6-214ENST00000616033 PDCP20941 246 aa15.46■□□□□ 0.06
MSH6-214ENST00000616033 CHST3Q7LGC8 479 aa15.46■□□□□ 0.06
MSH6-214ENST00000616033 REREQ9P2R6 1566 aa15.45■□□□□ 0.06
MSH6-214ENST00000616033 CCDC171Q6TFL3 1326 aa15.45■□□□□ 0.06
MSH6-214ENST00000616033 A0A0D9SFI3 127 aa15.45■□□□□ 0.06
MSH6-214ENST00000616033 PLA2G4DQ86XP0 818 aa15.45■□□□□ 0.06
MSH6-214ENST00000616033 NOL10Q9BSC4 688 aaKnown RBP15.45■□□□□ 0.06
MSH6-214ENST00000616033 ZSWIM6Q9HCJ5 1215 aa15.45■□□□□ 0.06
MSH6-214ENST00000616033 ECHDC1Q9NTX5 307 aa15.45■□□□□ 0.06
MSH6-214ENST00000616033 TLR7Q9NYK1 1049 aaKnown RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms