RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 RASSF7Q02833 373 aa24.91■■□□□ 1.58
TCF3-219ENST00000610756 ABCC12Q96J65 1359 aa24.91■■□□□ 1.58
TCF3-219ENST00000610756 RIC1Q4ADV7 1423 aa24.91■■□□□ 1.58
TCF3-219ENST00000610756 HOXA10P31260 410 aaPredicted RBP24.9■■□□□ 1.58
TCF3-219ENST00000610756 PRELPP51888 382 aa24.89■■□□□ 1.58
TCF3-219ENST00000610756 C1QTNF8P60827 252 aa24.89■■□□□ 1.58
TCF3-219ENST00000610756 NLRP3Q96P20 1036 aa24.89■■□□□ 1.58
TCF3-219ENST00000610756 PHAXQ9H814 394 aaKnown RBP24.89■■□□□ 1.58
TCF3-219ENST00000610756 COL11A2P13942 1736 aaPredicted RBP24.89■■□□□ 1.57
TCF3-219ENST00000610756 TRIM28Q13263 835 aaKnown RBP24.88■■□□□ 1.57
TCF3-219ENST00000610756 ISCA1Q9BUE6 129 aa24.88■■□□□ 1.57
TCF3-219ENST00000610756 LTBP3Q9NS15 1303 aa24.88■■□□□ 1.57
TCF3-219ENST00000610756 TWISTNBQ3B726 338 aaPredicted RBP24.87■■□□□ 1.57
TCF3-219ENST00000610756 TRMT112Q9UI30 125 aaKnown RBP24.87■■□□□ 1.57
TCF3-219ENST00000610756 ZC3H4Q9UPT8 1303 aaKnown RBP24.87■■□□□ 1.57
TCF3-219ENST00000610756 GOLGA2Q08379 1002 aa24.86■■□□□ 1.57
TCF3-219ENST00000610756 RIC3Q7Z5B4 369 aa24.86■■□□□ 1.57
TCF3-219ENST00000610756 RPGRQ92834 1020 aaKnown RBP24.86■■□□□ 1.57
TCF3-219ENST00000610756 CRAMP1Q96RY5 1269 aa24.86■■□□□ 1.57
TCF3-219ENST00000610756 RBM17Q96I25 401 aaKnown RBP24.86■■□□□ 1.57
TCF3-219ENST00000610756 TAOK3Q9H2K8 898 aa24.86■■□□□ 1.57
TCF3-219ENST00000610756 SLX4Q8IY92 1834 aa24.85■■□□□ 1.57
TCF3-219ENST00000610756 CCDC93Q567U6 631 aa24.85■■□□□ 1.57
TCF3-219ENST00000610756 C3orf67Q6ZVT6 689 aa24.85■■□□□ 1.57
TCF3-219ENST00000610756 SH3TC1Q8TE82 1336 aa24.84■■□□□ 1.57
TCF3-219ENST00000610756 FANCIQ9NVI1 1328 aa24.84■■□□□ 1.57
TCF3-219ENST00000610756 ATP5J2-PTCD1G3V325 749 aa24.84■■□□□ 1.57
TCF3-219ENST00000610756 RTKN2Q8IZC4 609 aa24.84■■□□□ 1.57
TCF3-219ENST00000610756 SYNE4Q8N205 404 aa24.84■■□□□ 1.57
TCF3-219ENST00000610756 STK31Q9BXU1 1019 aa24.84■■□□□ 1.57
TCF3-219ENST00000610756 KIF3CO14782 793 aa24.83■■□□□ 1.56
TCF3-219ENST00000610756 DDX58O95786 925 aaKnown RBP24.83■■□□□ 1.56
TCF3-219ENST00000610756 SBF1O95248 1867 aa24.82■■□□□ 1.56
TCF3-219ENST00000610756 HCLS1P14317 486 aaPredicted RBP24.82■■□□□ 1.56
TCF3-219ENST00000610756 CC2D2BQ6DHV5 1058 aa24.82■■□□□ 1.56
TCF3-219ENST00000610756 SPINK5Q9NQ38 1064 aaPredicted RBP24.82■■□□□ 1.56
TCF3-219ENST00000610756 KDM2BQ8NHM5 1336 aa24.82■■□□□ 1.56
TCF3-219ENST00000610756 CCER2I3L3R5 266 aa24.81■■□□□ 1.56
TCF3-219ENST00000610756 VAMP4O75379 141 aa24.81■■□□□ 1.56
TCF3-219ENST00000610756 MYH16Q9H6N6 1097 aa24.81■■□□□ 1.56
TCF3-219ENST00000610756 SLC4A2P04920 1241 aa24.8■■□□□ 1.56
TCF3-219ENST00000610756 FKBP4Q02790 459 aaKnown RBP eCLIP24.8■■□□□ 1.56
TCF3-219ENST00000610756 GRIPAP1Q4V328 841 aa24.8■■□□□ 1.56
TCF3-219ENST00000610756 OLFM4Q6UX06 510 aa24.8■■□□□ 1.56
TCF3-219ENST00000610756 FAM89AQ96GI7 184 aa24.8■■□□□ 1.56
TCF3-219ENST00000610756 GLTPD2A6NH11 291 aa24.79■■□□□ 1.56
TCF3-219ENST00000610756 EXOSC9Q06265 439 aaKnown RBP24.79■■□□□ 1.56
TCF3-219ENST00000610756 KSR2Q6VAB6 950 aa24.79■■□□□ 1.56
TCF3-219ENST00000610756 METTL22Q9BUU2 404 aaPredicted RBP24.79■■□□□ 1.56
TCF3-219ENST00000610756 NMRK2Q9NPI5 230 aa24.79■■□□□ 1.56
TCF3-219ENST00000610756 TNRC6CQ9HCJ0 1690 aaKnown RBP24.79■■□□□ 1.56
TCF3-219ENST00000610756 ZNF521Q96K83 1311 aa24.78■■□□□ 1.56
TCF3-219ENST00000610756 TCERG1O14776 1098 aaKnown RBP24.78■■□□□ 1.56
TCF3-219ENST00000610756 CCDC191Q8NCU4 936 aa24.78■■□□□ 1.56
TCF3-219ENST00000610756 MYD88Q99836 296 aa24.78■■□□□ 1.56
TCF3-219ENST00000610756 FER1L6Q2WGJ9 1857 aa24.77■■□□□ 1.56
TCF3-219ENST00000610756 PI4KAP2A4QPH2 592 aa24.77■■□□□ 1.56
TCF3-219ENST00000610756 BBOX1O75936 387 aa24.77■■□□□ 1.56
TCF3-219ENST00000610756 DPY19L2Q6NUT2 758 aa24.77■■□□□ 1.56
TCF3-219ENST00000610756 PI4KAP1Q8N8J0 262 aa24.77■■□□□ 1.56
TCF3-219ENST00000610756 ARFGEF2Q9Y6D5 1785 aa24.77■■□□□ 1.56
TCF3-219ENST00000610756 ZBTB38Q8NAP3 1195 aaPredicted RBP24.76■■□□□ 1.55
TCF3-219ENST00000610756 ZNF428Q96B54 188 aa24.76■■□□□ 1.55
TCF3-219ENST00000610756 PSMD1Q99460 953 aa24.76■■□□□ 1.55
TCF3-219ENST00000610756 MAP3K2Q9Y2U5 619 aa24.76■■□□□ 1.55
TCF3-219ENST00000610756 ANKRD36CQ5JPF3 1778 aa24.75■■□□□ 1.55
TCF3-219ENST00000610756 PPEF1O14829 653 aaPredicted RBP24.75■■□□□ 1.55
TCF3-219ENST00000610756 SF3B3Q15393 1217 aaKnown RBP24.75■■□□□ 1.55
TCF3-219ENST00000610756 DDX46Q7L014 1031 aaKnown RBP24.75■■□□□ 1.55
TCF3-219ENST00000610756 G2E3Q7L622 706 aa24.75■■□□□ 1.55
TCF3-219ENST00000610756 RRAGCQ9HB90 399 aa24.75■■□□□ 1.55
TCF3-219ENST00000610756 TOMM70O94826 608 aa24.74■■□□□ 1.55
TCF3-219ENST00000610756 ATP6V0A2Q9Y487 856 aa24.74■■□□□ 1.55
TCF3-219ENST00000610756 ABCC4O15439 1325 aa24.73■■□□□ 1.55
TCF3-219ENST00000610756 IRS4O14654 1257 aaPredicted RBP24.73■■□□□ 1.55
TCF3-219ENST00000610756 HSP90B1P14625 803 aaKnown RBP24.73■■□□□ 1.55
TCF3-219ENST00000610756 TMX4Q9H1E5 349 aaPredicted RBP24.73■■□□□ 1.55
TCF3-219ENST00000610756 ZNF277Q9NRM2 450 aaPredicted RBP24.73■■□□□ 1.55
TCF3-219ENST00000610756 CWC25Q9NXE8 425 aaPredicted RBP24.73■■□□□ 1.55
TCF3-219ENST00000610756 SNED1Q8TER0 1413 aa24.73■■□□□ 1.55
TCF3-219ENST00000610756 RTL5Q5HYW3 569 aaPredicted RBP24.72■■□□□ 1.55
TCF3-219ENST00000610756 PCCAP05165 728 aaPredicted RBP24.71■■□□□ 1.55
TCF3-219ENST00000610756 FLIIQ13045 1269 aa24.71■■□□□ 1.55
TCF3-219ENST00000610756 GRAPQ13588 217 aa24.71■■□□□ 1.55
TCF3-219ENST00000610756 SP8Q8IXZ3 490 aa24.71■■□□□ 1.55
TCF3-219ENST00000610756 GRAPLQ8TC17 118 aaPredicted RBP24.71■■□□□ 1.55
TCF3-219ENST00000610756 IGKV5-2P06315 115 aa24.7■■□□□ 1.54
TCF3-219ENST00000610756 IARSP41252 1262 aaKnown RBP24.7■■□□□ 1.54
TCF3-219ENST00000610756 NEXNQ0ZGT2 675 aa24.7■■□□□ 1.54
TCF3-219ENST00000610756 CACNA1SQ13698 1873 aa24.69■■□□□ 1.54
TCF3-219ENST00000610756 VEGFAP15692 232 aaPredicted RBP24.69■■□□□ 1.54
TCF3-219ENST00000610756 TMC4Q7Z404 712 aa24.69■■□□□ 1.54
TCF3-219ENST00000610756 C16orf71Q8IYS4 520 aaPredicted RBP24.68■■□□□ 1.54
TCF3-219ENST00000610756 E9PSI1 815 aa24.67■■□□□ 1.54
TCF3-219ENST00000610756 VPS33BQ9H267 617 aa24.67■■□□□ 1.54
TCF3-219ENST00000610756 CCDC88AQ3V6T2 1871 aa24.67■■□□□ 1.54
TCF3-219ENST00000610756 POTECB2RU33 542 aa24.66■■□□□ 1.54
TCF3-219ENST00000610756 PDE8AO60658 829 aa24.66■■□□□ 1.54
TCF3-219ENST00000610756 FKBP5Q13451 457 aaPredicted RBP24.66■■□□□ 1.54
TCF3-219ENST00000610756 SLC51AQ86UW1 340 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms