RNA–Protein interactions for RNA: ENST00000610452.1

COL15A1-205, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL15A1, Length 5,422 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-205ENST00000610452 ZNF569Q5MCW4 686 aa23.11■■□□□ 1.29
COL15A1-205ENST00000610452 LZTFL1Q9NQ48 299 aa23.11■■□□□ 1.29
COL15A1-205ENST00000610452 FSD2A1L4K1 749 aa23.11■■□□□ 1.29
COL15A1-205ENST00000610452 BUB1BO60566 1050 aaPredicted RBP23.11■■□□□ 1.29
COL15A1-205ENST00000610452 FGFR1OPO95684 399 aaKnown RBP23.11■■□□□ 1.29
COL15A1-205ENST00000610452 PRAM1Q96QH2 718 aa23.11■■□□□ 1.29
COL15A1-205ENST00000610452 NFE2L2Q16236 605 aa23.11■■□□□ 1.29
COL15A1-205ENST00000610452 SOGA3Q5TF21 947 aa23.1■■□□□ 1.29
COL15A1-205ENST00000610452 PHAXQ9H814 394 aaKnown RBP23.1■■□□□ 1.29
COL15A1-205ENST00000610452 SDSP20132 328 aa23.1■■□□□ 1.29
COL15A1-205ENST00000610452 ANAPC15P60006 121 aa23.1■■□□□ 1.29
COL15A1-205ENST00000610452 ARHGAP25P42331 645 aa23.1■■□□□ 1.29
COL15A1-205ENST00000610452 HSP90AA4PQ58FG1 418 aa23.1■■□□□ 1.29
COL15A1-205ENST00000610452 LMNTD2Q8IXW0 634 aa23.1■■□□□ 1.29
COL15A1-205ENST00000610452 TSG101Q99816 390 aa23.1■■□□□ 1.29
COL15A1-205ENST00000610452 PRPF4BQ13523 1007 aaKnown RBP23.1■■□□□ 1.29
COL15A1-205ENST00000610452 AKR1B10O60218 316 aa23.09■■□□□ 1.29
COL15A1-205ENST00000610452 GCKP35557 465 aa23.09■■□□□ 1.29
COL15A1-205ENST00000610452 PRG4Q92954 1404 aaPredicted RBP23.09■■□□□ 1.29
COL15A1-205ENST00000610452 IFNKQ9P0W0 207 aa23.09■■□□□ 1.29
COL15A1-205ENST00000610452 SYKP43405 635 aa23.09■■□□□ 1.29
COL15A1-205ENST00000610452 NLRP6P59044 892 aa23.09■■□□□ 1.29
COL15A1-205ENST00000610452 AP1ARQ63HQ0 302 aa23.09■■□□□ 1.29
COL15A1-205ENST00000610452 MRPS27Q92552 414 aaKnown RBP23.09■■□□□ 1.29
COL15A1-205ENST00000610452 CTAGE1Q96RT6 745 aa23.09■■□□□ 1.29
COL15A1-205ENST00000610452 CARD6Q9BX69 1037 aa23.09■■□□□ 1.29
COL15A1-205ENST00000610452 ARHGAP5Q13017 1502 aa23.09■■□□□ 1.29
COL15A1-205ENST00000610452 POLR3DP05423 398 aaPredicted RBP23.09■■□□□ 1.29
COL15A1-205ENST00000610452 PSME1Q06323 249 aa23.09■■□□□ 1.29
COL15A1-205ENST00000610452 KANK3Q6NY19 840 aa23.09■■□□□ 1.29
COL15A1-205ENST00000610452 UTP14AQ9BVJ6 771 aaKnown RBP23.09■■□□□ 1.29
COL15A1-205ENST00000610452 NOP2P46087 812 aaKnown RBP23.09■■□□□ 1.29
COL15A1-205ENST00000610452 CCDC96Q2M329 555 aa23.09■■□□□ 1.29
COL15A1-205ENST00000610452 NECAB1Q8N987 351 aa23.09■■□□□ 1.29
COL15A1-205ENST00000610452 MAP3K1Q13233 1512 aa23.08■■□□□ 1.29
COL15A1-205ENST00000610452 PCK1P35558 622 aa23.08■■□□□ 1.29
COL15A1-205ENST00000610452 SAMD15Q9P1V8 674 aa23.08■■□□□ 1.29
COL15A1-205ENST00000610452 NEK11Q8NG66 645 aa23.08■■□□□ 1.28
COL15A1-205ENST00000610452 CTNNBL1Q8WYA6 563 aaPredicted RBP23.08■■□□□ 1.28
COL15A1-205ENST00000610452 CAPZA3Q96KX2 299 aa23.08■■□□□ 1.28
COL15A1-205ENST00000610452 GOLIM4O00461 696 aa23.07■■□□□ 1.28
COL15A1-205ENST00000610452 CABP1Q9NZU7 370 aa23.07■■□□□ 1.28
COL15A1-205ENST00000610452 SWAP70Q9UH65 585 aa23.07■■□□□ 1.28
COL15A1-205ENST00000610452 FEZ2Q9UHY8 353 aaPredicted RBP23.07■■□□□ 1.28
COL15A1-205ENST00000610452 ABCC11Q96J66 1382 aa23.07■■□□□ 1.28
COL15A1-205ENST00000610452 VAV2P52735 878 aa23.07■■□□□ 1.28
COL15A1-205ENST00000610452 BOLA2Q9H3K6 86 aa23.07■■□□□ 1.28
COL15A1-205ENST00000610452 A6NNZ2 444 aa23.07■■□□□ 1.28
COL15A1-205ENST00000610452 MYO1BO43795 1136 aa23.07■■□□□ 1.28
COL15A1-205ENST00000610452 TUBB8Q3ZCM7 444 aa23.07■■□□□ 1.28
COL15A1-205ENST00000610452 CFAP58Q5T655 872 aa23.07■■□□□ 1.28
COL15A1-205ENST00000610452 NUTM2GQ5VZR2 741 aa23.07■■□□□ 1.28
COL15A1-205ENST00000610452 LARP1Q6PKG0 1096 aaKnown RBP23.07■■□□□ 1.28
COL15A1-205ENST00000610452 TROQ12816 1431 aaPredicted RBP23.07■■□□□ 1.28
COL15A1-205ENST00000610452 TACC1O75410 805 aa23.07■■□□□ 1.28
COL15A1-205ENST00000610452 SELENOSQ9BQE4 189 aa23.07■■□□□ 1.28
COL15A1-205ENST00000610452 ZFYP08048 801 aaPredicted RBP23.06■■□□□ 1.28
COL15A1-205ENST00000610452 SAMD1Q6SPF0 538 aaPredicted RBP23.06■■□□□ 1.28
COL15A1-205ENST00000610452 HOOK3Q86VS8 718 aa23.06■■□□□ 1.28
COL15A1-205ENST00000610452 NPHP3Q7Z494 1330 aa23.06■■□□□ 1.28
COL15A1-205ENST00000610452 STMN4Q9H169 189 aaPredicted RBP23.06■■□□□ 1.28
COL15A1-205ENST00000610452 SERPINA10Q9UK55 444 aa23.06■■□□□ 1.28
COL15A1-205ENST00000610452 GOLGA6CA6NDK9 693 aa23.05■■□□□ 1.28
COL15A1-205ENST00000610452 GOLGA6DP0CG33 693 aa23.05■■□□□ 1.28
COL15A1-205ENST00000610452 PPFIBP2Q8ND30 876 aa23.05■■□□□ 1.28
COL15A1-205ENST00000610452 TTC14Q96N46 770 aa23.05■■□□□ 1.28
COL15A1-205ENST00000610452 GOLGA6AQ9NYA3 693 aa23.05■■□□□ 1.28
COL15A1-205ENST00000610452 A0A1W2PRG0 241 aa23.05■■□□□ 1.28
COL15A1-205ENST00000610452 KIAA0753Q2KHM9 967 aa23.05■■□□□ 1.28
COL15A1-205ENST00000610452 RAPGEF4Q8WZA2 1011 aa23.05■■□□□ 1.28
COL15A1-205ENST00000610452 TRIM21P19474 475 aaKnown RBP23.05■■□□□ 1.28
COL15A1-205ENST00000610452 MIPOL1Q8TD10 442 aa23.05■■□□□ 1.28
COL15A1-205ENST00000610452 THUMPD2Q9BTF0 503 aaKnown RBP23.05■■□□□ 1.28
COL15A1-205ENST00000610452 PPP1R12BO60237 982 aaPredicted RBP23.04■■□□□ 1.28
COL15A1-205ENST00000610452 IKQ13123 557 aaPredicted RBP23.04■■□□□ 1.28
COL15A1-205ENST00000610452 INTS4Q96HW7 963 aaKnown RBP23.04■■□□□ 1.28
COL15A1-205ENST00000610452 STIM2Q9P246 746 aa23.04■■□□□ 1.28
COL15A1-205ENST00000610452 SUPT6HQ7KZ85 1726 aaKnown RBP23.04■■□□□ 1.28
COL15A1-205ENST00000610452 GOLGA8BA8MQT2 603 aa23.04■■□□□ 1.28
COL15A1-205ENST00000610452 KRT86O43790 486 aa23.04■■□□□ 1.28
COL15A1-205ENST00000610452 WDHD1O75717 1129 aaPredicted RBP23.04■■□□□ 1.28
COL15A1-205ENST00000610452 CHMP4BP1P59074 171 aa23.04■■□□□ 1.28
COL15A1-205ENST00000610452 FAM114A1Q8IWE2 563 aa23.03■■□□□ 1.28
COL15A1-205ENST00000610452 KCNG4Q8TDN1 519 aa23.03■■□□□ 1.28
COL15A1-205ENST00000610452 ATP11AP98196 1134 aa23.03■■□□□ 1.28
COL15A1-205ENST00000610452 LUC7L2Q9Y383 392 aaKnown RBP23.03■■□□□ 1.28
COL15A1-205ENST00000610452 RABEP2Q9H5N1 569 aa23.03■■□□□ 1.28
COL15A1-205ENST00000610452 GUCA1BQ9UMX6 200 aa23.03■■□□□ 1.28
COL15A1-205ENST00000610452 NSD3Q9BZ95 1437 aa23.03■■□□□ 1.28
COL15A1-205ENST00000610452 DDX46Q7L014 1031 aaKnown RBP23.03■■□□□ 1.28
COL15A1-205ENST00000610452 KRT83P78385 493 aa23.02■■□□□ 1.28
COL15A1-205ENST00000610452 CCDC172P0C7W6 258 aa23.02■■□□□ 1.28
COL15A1-205ENST00000610452 MXRA7P84157 204 aa23.02■■□□□ 1.28
COL15A1-205ENST00000610452 IFI16Q16666 785 aaKnown RBP23.02■■□□□ 1.28
COL15A1-205ENST00000610452 CDK19Q9BWU1 502 aa23.02■■□□□ 1.28
COL15A1-205ENST00000610452 ZNF622Q969S3 477 aaKnown RBP eCLIP23.02■■□□□ 1.28
COL15A1-205ENST00000610452 EFCC1Q9HA90 598 aa23.02■■□□□ 1.28
COL15A1-205ENST00000610452 CNNM1Q9NRU3 951 aa23.02■■□□□ 1.28
COL15A1-205ENST00000610452 TSHZ3Q63HK5 1081 aa23.01■■□□□ 1.27
COL15A1-205ENST00000610452 IFT74Q96LB3 600 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms