RNA–Protein interactions for RNA: ENST00000602959.5

UBE2E3-213, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2E3, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-213ENST00000602959 NLRP10Q86W26 655 aa31.2■■■□□ 2.59
UBE2E3-213ENST00000602959 MYH16Q9H6N6 1097 aa31.2■■■□□ 2.59
UBE2E3-213ENST00000602959 SBF1O95248 1867 aa31.2■■■□□ 2.58
UBE2E3-213ENST00000602959 GOLGA2Q08379 1002 aa31.19■■■□□ 2.58
UBE2E3-213ENST00000602959 UTP14AQ9BVJ6 771 aaKnown RBP31.19■■■□□ 2.58
UBE2E3-213ENST00000602959 CRY2Q49AN0 593 aa31.18■■■□□ 2.58
UBE2E3-213ENST00000602959 FER1L6Q2WGJ9 1857 aa31.16■■■□□ 2.58
UBE2E3-213ENST00000602959 PRPF40BQ6NWY9 871 aaKnown RBP31.16■■■□□ 2.58
UBE2E3-213ENST00000602959 ISCA1Q9BUE6 129 aa31.16■■■□□ 2.58
UBE2E3-213ENST00000602959 STK31Q9BXU1 1019 aa31.16■■■□□ 2.58
UBE2E3-213ENST00000602959 EXOSC9Q06265 439 aaKnown RBP31.15■■■□□ 2.58
UBE2E3-213ENST00000602959 SLC10A5Q5PT55 438 aa31.14■■■□□ 2.58
UBE2E3-213ENST00000602959 LAMB2P55268 1798 aa31.14■■■□□ 2.58
UBE2E3-213ENST00000602959 VAMP4O75379 141 aa31.13■■■□□ 2.57
UBE2E3-213ENST00000602959 RIC3Q7Z5B4 369 aa31.13■■■□□ 2.57
UBE2E3-213ENST00000602959 DDX58O95786 925 aaKnown RBP31.12■■■□□ 2.57
UBE2E3-213ENST00000602959 TRIM28Q13263 835 aaKnown RBP31.12■■■□□ 2.57
UBE2E3-213ENST00000602959 C21orf2O43822 256 aa31.11■■■□□ 2.57
UBE2E3-213ENST00000602959 TRMT112Q9UI30 125 aaKnown RBP31.11■■■□□ 2.57
UBE2E3-213ENST00000602959 DDX60Q8IY21 1712 aaKnown RBP31.1■■■□□ 2.57
UBE2E3-213ENST00000602959 SH3TC1Q8TE82 1336 aa31.1■■■□□ 2.57
UBE2E3-213ENST00000602959 TCERG1O14776 1098 aaKnown RBP31.1■■■□□ 2.57
UBE2E3-213ENST00000602959 HOXA10P31260 410 aaPredicted RBP31.1■■■□□ 2.57
UBE2E3-213ENST00000602959 MIER1Q8N108 512 aa31.1■■■□□ 2.57
UBE2E3-213ENST00000602959 ATP5J2-PTCD1G3V325 749 aa31.09■■■□□ 2.57
UBE2E3-213ENST00000602959 NFKBIEO00221 500 aa31.09■■■□□ 2.57
UBE2E3-213ENST00000602959 ALDH1B1P30837 517 aa31.09■■■□□ 2.57
UBE2E3-213ENST00000602959 RASSF7Q02833 373 aa31.09■■■□□ 2.57
UBE2E3-213ENST00000602959 SOGA3Q5TF21 947 aa31.09■■■□□ 2.57
UBE2E3-213ENST00000602959 C9orf131Q5VYM1 1079 aa31.09■■■□□ 2.57
UBE2E3-213ENST00000602959 C7orf43Q8WVR3 580 aa31.09■■■□□ 2.57
UBE2E3-213ENST00000602959 CCDC88AQ3V6T2 1871 aa31.09■■■□□ 2.57
UBE2E3-213ENST00000602959 SLC4A2P04920 1241 aa31.08■■■□□ 2.57
UBE2E3-213ENST00000602959 C3orf67Q6ZVT6 689 aa31.08■■■□□ 2.57
UBE2E3-213ENST00000602959 NLRP3Q96P20 1036 aa31.08■■■□□ 2.57
UBE2E3-213ENST00000602959 ZNF219Q9P2Y4 722 aaPredicted RBP31.08■■■□□ 2.57
UBE2E3-213ENST00000602959 RPGRQ92834 1020 aaKnown RBP31.07■■■□□ 2.56
UBE2E3-213ENST00000602959 METTL22Q9BUU2 404 aaPredicted RBP31.07■■■□□ 2.56
UBE2E3-213ENST00000602959 E9PSI1 815 aa31.06■■■□□ 2.56
UBE2E3-213ENST00000602959 KSR2Q6VAB6 950 aa31.06■■■□□ 2.56
UBE2E3-213ENST00000602959 SYNE4Q8N205 404 aa31.06■■■□□ 2.56
UBE2E3-213ENST00000602959 LTBP3Q9NS15 1303 aa31.05■■■□□ 2.56
UBE2E3-213ENST00000602959 G2E3Q7L622 706 aa31.05■■■□□ 2.56
UBE2E3-213ENST00000602959 MYD88Q99836 296 aa31.05■■■□□ 2.56
UBE2E3-213ENST00000602959 RNF181Q9P0P0 153 aa31.05■■■□□ 2.56
UBE2E3-213ENST00000602959 DICER1Q9UPY3 1922 aaKnown RBP31.04■■■□□ 2.56
UBE2E3-213ENST00000602959 TIAM2Q8IVF5 1701 aa31.04■■■□□ 2.56
UBE2E3-213ENST00000602959 LMNB1P20700 586 aa31.04■■■□□ 2.56
UBE2E3-213ENST00000602959 CRAMP1Q96RY5 1269 aa31.04■■■□□ 2.56
UBE2E3-213ENST00000602959 MAP3K2Q9Y2U5 619 aa31.04■■■□□ 2.56
UBE2E3-213ENST00000602959 PI4KAP2A4QPH2 592 aa31.03■■■□□ 2.56
UBE2E3-213ENST00000602959 HCLS1P14317 486 aaPredicted RBP31.03■■■□□ 2.56
UBE2E3-213ENST00000602959 PRELPP51888 382 aa31.03■■■□□ 2.56
UBE2E3-213ENST00000602959 FLIIQ13045 1269 aa31.03■■■□□ 2.56
UBE2E3-213ENST00000602959 PI4KAP1Q8N8J0 262 aa31.03■■■□□ 2.56
UBE2E3-213ENST00000602959 CCDC191Q8NCU4 936 aa31.03■■■□□ 2.56
UBE2E3-213ENST00000602959 RBM17Q96I25 401 aaKnown RBP31.03■■■□□ 2.56
UBE2E3-213ENST00000602959 CCDC93Q567U6 631 aa31.02■■■□□ 2.56
UBE2E3-213ENST00000602959 FAM89AQ96GI7 184 aa31.02■■■□□ 2.56
UBE2E3-213ENST00000602959 SLFN5Q08AF3 891 aa31.01■■■□□ 2.55
UBE2E3-213ENST00000602959 ZNF428Q96B54 188 aa31.01■■■□□ 2.55
UBE2E3-213ENST00000602959 TAOK3Q9H2K8 898 aa31.01■■■□□ 2.55
UBE2E3-213ENST00000602959 ZC3H4Q9UPT8 1303 aaKnown RBP31■■■□□ 2.55
UBE2E3-213ENST00000602959 SNED1Q8TER0 1413 aa31■■■□□ 2.55
UBE2E3-213ENST00000602959 ZBTB38Q8NAP3 1195 aaPredicted RBP30.99■■■□□ 2.55
UBE2E3-213ENST00000602959 CWC25Q9NXE8 425 aaPredicted RBP30.99■■■□□ 2.55
UBE2E3-213ENST00000602959 GPBP1L1Q9HC44 474 aaPredicted RBP30.98■■■□□ 2.55
UBE2E3-213ENST00000602959 NEXNQ0ZGT2 675 aa30.97■■■□□ 2.55
UBE2E3-213ENST00000602959 FKBP5Q13451 457 aaPredicted RBP30.97■■■□□ 2.55
UBE2E3-213ENST00000602959 IGKV5-2P06315 115 aa30.96■■■□□ 2.55
UBE2E3-213ENST00000602959 CC2D2BQ6DHV5 1058 aa30.96■■■□□ 2.55
UBE2E3-213ENST00000602959 OLFM4Q6UX06 510 aa30.96■■■□□ 2.55
UBE2E3-213ENST00000602959 RTKN2Q8IZC4 609 aa30.96■■■□□ 2.55
UBE2E3-213ENST00000602959 ZNF526Q8TF50 670 aaPredicted RBP30.96■■■□□ 2.55
UBE2E3-213ENST00000602959 ABCC4O15439 1325 aa30.96■■■□□ 2.55
UBE2E3-213ENST00000602959 IRS4O14654 1257 aaPredicted RBP30.95■■■□□ 2.55
UBE2E3-213ENST00000602959 PCCAP05165 728 aaPredicted RBP30.95■■■□□ 2.55
UBE2E3-213ENST00000602959 CDCA7LQ96GN5 454 aa30.95■■■□□ 2.55
UBE2E3-213ENST00000602959 PPEF1O14829 653 aaPredicted RBP30.94■■■□□ 2.54
UBE2E3-213ENST00000602959 TAF1P21675 1872 aa30.94■■■□□ 2.54
UBE2E3-213ENST00000602959 FKBP4Q02790 459 aaKnown RBP eCLIP30.94■■■□□ 2.54
UBE2E3-213ENST00000602959 SF3B3Q15393 1217 aaKnown RBP30.94■■■□□ 2.54
UBE2E3-213ENST00000602959 RTL5Q5HYW3 569 aaPredicted RBP30.94■■■□□ 2.54
UBE2E3-213ENST00000602959 TRMT2AQ8IZ69 625 aaKnown RBP30.94■■■□□ 2.54
UBE2E3-213ENST00000602959 HSP90B1P14625 803 aaKnown RBP30.93■■■□□ 2.54
UBE2E3-213ENST00000602959 DNAAF4Q8WXU2 420 aa30.93■■■□□ 2.54
UBE2E3-213ENST00000602959 DDX46Q7L014 1031 aaKnown RBP30.92■■■□□ 2.54
UBE2E3-213ENST00000602959 NEURL1BA8MQ27 555 aa30.91■■■□□ 2.54
UBE2E3-213ENST00000602959 GRIPAP1Q4V328 841 aa30.91■■■□□ 2.54
UBE2E3-213ENST00000602959 CDHR2Q9BYE9 1310 aa30.91■■■□□ 2.54
UBE2E3-213ENST00000602959 GRAPQ13588 217 aa30.9■■■□□ 2.54
UBE2E3-213ENST00000602959 CWF19L2Q2TBE0 894 aaKnown RBP30.9■■■□□ 2.54
UBE2E3-213ENST00000602959 GRAPLQ8TC17 118 aaPredicted RBP30.9■■■□□ 2.54
UBE2E3-213ENST00000602959 PSMD1Q99460 953 aa30.9■■■□□ 2.54
UBE2E3-213ENST00000602959 MYH3P11055 1940 aa30.9■■■□□ 2.54
UBE2E3-213ENST00000602959 LRRC37AA6NMS7 1700 aa30.9■■■□□ 2.54
UBE2E3-213ENST00000602959 BBOX1O75936 387 aa30.89■■■□□ 2.54
UBE2E3-213ENST00000602959 ATP6V0A2Q9Y487 856 aa30.89■■■□□ 2.54
UBE2E3-213ENST00000602959 SLC51AQ86UW1 340 aa30.87■■■□□ 2.53
UBE2E3-213ENST00000602959 LINS1Q8NG48 757 aa30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms