RNA–Protein interactions for RNA: ENST00000602710.5

UBE2E3-209, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-209ENST00000602710 TBC1D9BQ66K14 1250 aa23.99■■□□□ 1.43
UBE2E3-209ENST00000602710 NIP7Q9Y221 180 aaKnown RBP eCLIP23.99■■□□□ 1.43
UBE2E3-209ENST00000602710 RGL2O15211 777 aa23.98■■□□□ 1.43
UBE2E3-209ENST00000602710 GNAI3P08754 354 aa23.98■■□□□ 1.43
UBE2E3-209ENST00000602710 FLAD1Q8NFF5 587 aa23.98■■□□□ 1.43
UBE2E3-209ENST00000602710 UBTFL1P0CB47 393 aaPredicted RBP23.97■■□□□ 1.43
UBE2E3-209ENST00000602710 GYS1P13807 737 aa23.97■■□□□ 1.43
UBE2E3-209ENST00000602710 BICDL1Q6ZP65 573 aa23.97■■□□□ 1.43
UBE2E3-209ENST00000602710 PCDHB15Q9Y5E8 787 aa23.97■■□□□ 1.43
UBE2E3-209ENST00000602710 IBTKQ9P2D0 1353 aaPredicted RBP23.97■■□□□ 1.43
UBE2E3-209ENST00000602710 AAMPQ13685 434 aa23.96■■□□□ 1.43
UBE2E3-209ENST00000602710 RTL5Q5HYW3 569 aaPredicted RBP23.96■■□□□ 1.43
UBE2E3-209ENST00000602710 UTYO14607 1347 aa23.96■■□□□ 1.43
UBE2E3-209ENST00000602710 SUSD4Q5VX71 490 aa23.95■■□□□ 1.43
UBE2E3-209ENST00000602710 UBE3BQ7Z3V4 1068 aa23.95■■□□□ 1.43
UBE2E3-209ENST00000602710 FAM177BA6PVY3 158 aa23.95■■□□□ 1.42
UBE2E3-209ENST00000602710 H7C1W4 665 aa23.95■■□□□ 1.42
UBE2E3-209ENST00000602710 QSER1Q2KHR3 1735 aa23.95■■□□□ 1.42
UBE2E3-209ENST00000602710 PPP4R2Q9NY27 417 aa23.95■■□□□ 1.42
UBE2E3-209ENST00000602710 LRRFIP2Q9Y608 721 aaKnown RBP23.95■■□□□ 1.42
UBE2E3-209ENST00000602710 GNAI2P04899 355 aa23.94■■□□□ 1.42
UBE2E3-209ENST00000602710 CASP7P55210 303 aa23.94■■□□□ 1.42
UBE2E3-209ENST00000602710 SYNE4Q8N205 404 aa23.93■■□□□ 1.42
UBE2E3-209ENST00000602710 FAM89AQ96GI7 184 aa23.93■■□□□ 1.42
UBE2E3-209ENST00000602710 PARP10Q53GL7 1025 aa23.92■■□□□ 1.42
UBE2E3-209ENST00000602710 SUCLG2Q96I99 432 aa23.92■■□□□ 1.42
UBE2E3-209ENST00000602710 SETDB2Q96T68 719 aa23.92■■□□□ 1.42
UBE2E3-209ENST00000602710 PDGFDQ9GZP0 370 aaPredicted RBP23.92■■□□□ 1.42
UBE2E3-209ENST00000602710 TRMT112Q9UI30 125 aaKnown RBP23.92■■□□□ 1.42
UBE2E3-209ENST00000602710 PCCAP05165 728 aaPredicted RBP23.91■■□□□ 1.42
UBE2E3-209ENST00000602710 NFIXQ14938 502 aa23.91■■□□□ 1.42
UBE2E3-209ENST00000602710 ZBTB38Q8NAP3 1195 aaPredicted RBP23.91■■□□□ 1.42
UBE2E3-209ENST00000602710 KAZALD1Q96I82 304 aa23.91■■□□□ 1.42
UBE2E3-209ENST00000602710 B4GALNT3Q6L9W6 998 aa23.91■■□□□ 1.42
UBE2E3-209ENST00000602710 UTP14AQ9BVJ6 771 aaKnown RBP23.91■■□□□ 1.42
UBE2E3-209ENST00000602710 NTSR2O95665 410 aa23.89■■□□□ 1.41
UBE2E3-209ENST00000602710 PPP1R42Q7Z4L9 355 aa23.89■■□□□ 1.41
UBE2E3-209ENST00000602710 SIRT2Q8IXJ6 389 aa23.89■■□□□ 1.41
UBE2E3-209ENST00000602710 TM4SF1P30408 202 aa23.88■■□□□ 1.41
UBE2E3-209ENST00000602710 EPHA10Q5JZY3 1008 aa23.88■■□□□ 1.41
UBE2E3-209ENST00000602710 CEP85Q6P2H3 762 aa23.88■■□□□ 1.41
UBE2E3-209ENST00000602710 CCDC136Q96JN2 1154 aa23.88■■□□□ 1.41
UBE2E3-209ENST00000602710 COL24A1Q17RW2 1714 aa23.88■■□□□ 1.41
UBE2E3-209ENST00000602710 MSL1Q68DK7 614 aa23.87■■□□□ 1.41
UBE2E3-209ENST00000602710 NUTM1Q86Y26 1132 aa23.87■■□□□ 1.41
UBE2E3-209ENST00000602710 BICC1Q9H694 974 aaKnown RBP23.87■■□□□ 1.41
UBE2E3-209ENST00000602710 NLGN1Q8N2Q7 840 aa23.86■■□□□ 1.41
UBE2E3-209ENST00000602710 IGHDP01880 384 aa23.86■■□□□ 1.41
UBE2E3-209ENST00000602710 ANKRD44Q8N8A2 993 aa23.86■■□□□ 1.41
UBE2E3-209ENST00000602710 HDAC5Q9UQL6 1122 aa23.86■■□□□ 1.41
UBE2E3-209ENST00000602710 SH3TC1Q8TE82 1336 aa23.85■■□□□ 1.41
UBE2E3-209ENST00000602710 CDHR2Q9BYE9 1310 aa23.85■■□□□ 1.41
UBE2E3-209ENST00000602710 IRS4O14654 1257 aaPredicted RBP23.85■■□□□ 1.41
UBE2E3-209ENST00000602710 FOXO4P98177 505 aa23.85■■□□□ 1.41
UBE2E3-209ENST00000602710 DDR1Q08345 913 aa23.85■■□□□ 1.41
UBE2E3-209ENST00000602710 NBPF5PQ86XG9 351 aaPredicted RBP23.85■■□□□ 1.41
UBE2E3-209ENST00000602710 RPAP2Q8IXW5 612 aaPredicted RBP23.85■■□□□ 1.41
UBE2E3-209ENST00000602710 CARMIL3Q8ND23 1372 aa23.85■■□□□ 1.41
UBE2E3-209ENST00000602710 R3HDM1Q15032 1099 aaKnown RBP23.84■■□□□ 1.41
UBE2E3-209ENST00000602710 ERFEQ4G0M1 354 aa23.84■■□□□ 1.41
UBE2E3-209ENST00000602710 PNMA6EA0A0J9YXQ4 647 aa23.83■■□□□ 1.41
UBE2E3-209ENST00000602710 HCLS1P14317 486 aaPredicted RBP23.83■■□□□ 1.41
UBE2E3-209ENST00000602710 ATP8B2P98198 1209 aa23.83■■□□□ 1.41
UBE2E3-209ENST00000602710 NYXQ9GZU5 481 aa23.83■■□□□ 1.41
UBE2E3-209ENST00000602710 POLRMTO00411 1230 aaKnown RBP23.82■■□□□ 1.4
UBE2E3-209ENST00000602710 TPTE2Q6XPS3 522 aa23.82■■□□□ 1.4
UBE2E3-209ENST00000602710 CCDC24Q8N4L8 307 aa23.82■■□□□ 1.4
UBE2E3-209ENST00000602710 SERPINB2P05120 415 aa23.82■■□□□ 1.4
UBE2E3-209ENST00000602710 GTF2E1P29083 439 aaPredicted RBP23.82■■□□□ 1.4
UBE2E3-209ENST00000602710 PLA2G12BQ9BX93 195 aa23.82■■□□□ 1.4
UBE2E3-209ENST00000602710 HDAC1Q13547 482 aaPredicted RBP23.81■■□□□ 1.4
UBE2E3-209ENST00000602710 RABL6Q3YEC7 729 aaPredicted RBP23.81■■□□□ 1.4
UBE2E3-209ENST00000602710 LMBR1LQ6UX01 489 aa23.81■■□□□ 1.4
UBE2E3-209ENST00000602710 DDX60Q8IY21 1712 aaKnown RBP23.81■■□□□ 1.4
UBE2E3-209ENST00000602710 MMP10P09238 476 aa23.8■■□□□ 1.4
UBE2E3-209ENST00000602710 MTX1Q13505 466 aa23.8■■□□□ 1.4
UBE2E3-209ENST00000602710 RWDD1Q9H446 243 aaPredicted RBP23.8■■□□□ 1.4
UBE2E3-209ENST00000602710 ABCC12Q96J65 1359 aa23.8■■□□□ 1.4
UBE2E3-209ENST00000602710 SRGAP3O43295 1099 aa23.79■■□□□ 1.4
UBE2E3-209ENST00000602710 PDE8AO60658 829 aa23.79■■□□□ 1.4
UBE2E3-209ENST00000602710 PSDA5PKW4 1024 aaPredicted RBP23.78■■□□□ 1.4
UBE2E3-209ENST00000602710 NPHP1O15259 732 aa23.78■■□□□ 1.4
UBE2E3-209ENST00000602710 PRR5LQ6MZQ0 368 aa23.78■■□□□ 1.4
UBE2E3-209ENST00000602710 CNBD1Q8NA66 436 aa23.78■■□□□ 1.4
UBE2E3-209ENST00000602710 MYH3P11055 1940 aa23.78■■□□□ 1.4
UBE2E3-209ENST00000602710 CTSWP56202 376 aa23.78■■□□□ 1.4
UBE2E3-209ENST00000602710 POLA2Q14181 598 aa23.78■■□□□ 1.4
UBE2E3-209ENST00000602710 SLC10A5Q5PT55 438 aa23.78■■□□□ 1.4
UBE2E3-209ENST00000602710 SSH3Q8TE77 659 aa23.78■■□□□ 1.4
UBE2E3-209ENST00000602710 SLC16A10Q8TF71 515 aa23.78■■□□□ 1.4
UBE2E3-209ENST00000602710 CCDC85AQ96PX6 553 aaPredicted RBP23.78■■□□□ 1.4
UBE2E3-209ENST00000602710 CHMP3Q9Y3E7 222 aa23.78■■□□□ 1.4
UBE2E3-209ENST00000602710 LAMB2P55268 1798 aa23.77■■□□□ 1.4
UBE2E3-209ENST00000602710 CASZ1Q86V15 1759 aa23.77■■□□□ 1.4
UBE2E3-209ENST00000602710 CSF1RP07333 972 aa23.77■■□□□ 1.4
UBE2E3-209ENST00000602710 TTLL11Q8NHH1 800 aa23.77■■□□□ 1.4
UBE2E3-209ENST00000602710 HMMRO75330 724 aa23.76■■□□□ 1.39
UBE2E3-209ENST00000602710 C3orf67Q6ZVT6 689 aa23.76■■□□□ 1.39
UBE2E3-209ENST00000602710 PARP3Q9Y6F1 533 aa23.76■■□□□ 1.39
UBE2E3-209ENST00000602710 KDM2BQ8NHM5 1336 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms