RNA–Protein interactions for RNA: ENST00000602319.1

HCG18-242, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 3,342 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-242ENST00000602319 TPCN1Q9ULQ1 816 aa11.72□□□□□ -0.53
HCG18-242ENST00000602319 PPP6R1Q9UPN7 881 aa11.72□□□□□ -0.53
HCG18-242ENST00000602319 UBR1Q8IWV7 1749 aa11.72□□□□□ -0.53
HCG18-242ENST00000602319 CCDC66A2RUB6 948 aa11.72□□□□□ -0.53
HCG18-242ENST00000602319 MTX1Q13505 466 aa11.72□□□□□ -0.53
HCG18-242ENST00000602319 LEO1Q8WVC0 666 aaPredicted RBP11.72□□□□□ -0.53
HCG18-242ENST00000602319 STK31Q9BXU1 1019 aa11.72□□□□□ -0.53
HCG18-242ENST00000602319 TNMDQ9H2S6 317 aa11.72□□□□□ -0.53
HCG18-242ENST00000602319 L2HGDHQ9H9P8 463 aa11.72□□□□□ -0.53
HCG18-242ENST00000602319 CYP46A1Q9Y6A2 500 aa11.72□□□□□ -0.53
HCG18-242ENST00000602319 CLIP2Q9UDT6 1046 aa11.71□□□□□ -0.53
HCG18-242ENST00000602319 SLIT1O75093 1534 aa11.71□□□□□ -0.53
HCG18-242ENST00000602319 PDCP20941 246 aa11.71□□□□□ -0.53
HCG18-242ENST00000602319 KCNJ6P48051 423 aa11.71□□□□□ -0.53
HCG18-242ENST00000602319 ZNF446Q9NWS9 450 aa11.71□□□□□ -0.53
HCG18-242ENST00000602319 DACT1Q9NYF0 836 aa11.71□□□□□ -0.53
HCG18-242ENST00000602319 PLEKHG3A1L390 1219 aa11.71□□□□□ -0.54
HCG18-242ENST00000602319 GLRX3O76003 335 aaKnown RBP11.71□□□□□ -0.54
HCG18-242ENST00000602319 CPA1P15085 419 aa11.71□□□□□ -0.54
HCG18-242ENST00000602319 TSGA10IPQ3SY00 556 aa11.71□□□□□ -0.54
HCG18-242ENST00000602319 PGBD1Q96JS3 809 aa11.71□□□□□ -0.54
HCG18-242ENST00000602319 SIPA1L3O60292 1781 aaPredicted RBP11.71□□□□□ -0.54
HCG18-242ENST00000602319 FLT4P35916 1363 aa11.71□□□□□ -0.54
HCG18-242ENST00000602319 MED23Q9ULK4 1368 aa11.71□□□□□ -0.54
HCG18-242ENST00000602319 UBTFL1P0CB47 393 aaPredicted RBP11.7□□□□□ -0.54
HCG18-242ENST00000602319 CCDC93Q567U6 631 aa11.7□□□□□ -0.54
HCG18-242ENST00000602319 FBXO38Q6PIJ6 1188 aa11.7□□□□□ -0.54
HCG18-242ENST00000602319 PPP1R42Q7Z4L9 355 aa11.7□□□□□ -0.54
HCG18-242ENST00000602319 RUFY2Q8WXA3 655 aa11.7□□□□□ -0.54
HCG18-242ENST00000602319 BBXQ8WY36 941 aaPredicted RBP11.7□□□□□ -0.54
HCG18-242ENST00000602319 JAKMIP1Q96N16 626 aaKnown RBP11.7□□□□□ -0.54
HCG18-242ENST00000602319 IL1RAPL2Q9NP60 686 aa11.7□□□□□ -0.54
HCG18-242ENST00000602319 DIP2BQ9P265 1576 aa11.7□□□□□ -0.54
HCG18-242ENST00000602319 IRX5P78411 483 aaPredicted RBP11.7□□□□□ -0.54
HCG18-242ENST00000602319 PLCB2Q00722 1185 aa11.7□□□□□ -0.54
HCG18-242ENST00000602319 TPD52L1Q16890 204 aaPredicted RBP11.7□□□□□ -0.54
HCG18-242ENST00000602319 MAP4K1Q92918 833 aa11.7□□□□□ -0.54
HCG18-242ENST00000602319 MIS18AQ9NYP9 233 aa11.7□□□□□ -0.54
HCG18-242ENST00000602319 USP27XA6NNY8 438 aa11.7□□□□□ -0.54
HCG18-242ENST00000602319 KIF2AO00139 706 aaPredicted RBP11.7□□□□□ -0.54
HCG18-242ENST00000602319 FOXO3O43524 673 aa11.7□□□□□ -0.54
HCG18-242ENST00000602319 IGSF3O75054 1194 aa11.7□□□□□ -0.54
HCG18-242ENST00000602319 ZNF215Q9UL58 517 aaPredicted RBP11.7□□□□□ -0.54
HCG18-242ENST00000602319 PHRF1Q9P1Y6 1649 aaKnown RBP11.69□□□□□ -0.54
HCG18-242ENST00000602319 RAPGEF3O95398 923 aa11.69□□□□□ -0.54
HCG18-242ENST00000602319 RESTQ13127 1097 aa11.69□□□□□ -0.54
HCG18-242ENST00000602319 HSP90AB2PQ58FF8 381 aa11.69□□□□□ -0.54
HCG18-242ENST00000602319 LARP6Q9BRS8 491 aaKnown RBP11.69□□□□□ -0.54
HCG18-242ENST00000602319 TRIM5Q9C035 493 aa11.69□□□□□ -0.54
HCG18-242ENST00000602319 CCAR2Q8N163 923 aaKnown RBP11.69□□□□□ -0.54
HCG18-242ENST00000602319 SPG7Q9UQ90 795 aa11.69□□□□□ -0.54
HCG18-242ENST00000602319 NCKAP5LQ9HCH0 1330 aa11.69□□□□□ -0.54
HCG18-242ENST00000602319 NR1I2O75469 434 aa11.68□□□□□ -0.54
HCG18-242ENST00000602319 MAP4K4O95819 1239 aaPredicted RBP11.68□□□□□ -0.54
HCG18-242ENST00000602319 CYP2C19P33261 490 aa11.68□□□□□ -0.54
HCG18-242ENST00000602319 ZNF165P49910 485 aa11.68□□□□□ -0.54
HCG18-242ENST00000602319 HSP90AB4PQ58FF6 505 aa11.68□□□□□ -0.54
HCG18-242ENST00000602319 FBXO31Q5XUX0 539 aaPredicted RBP11.68□□□□□ -0.54
HCG18-242ENST00000602319 LARP1BQ659C4 914 aaKnown RBP11.68□□□□□ -0.54
HCG18-242ENST00000602319 CREB3L3Q68CJ9 461 aa11.68□□□□□ -0.54
HCG18-242ENST00000602319 CWC27Q6UX04 472 aaKnown RBP11.68□□□□□ -0.54
HCG18-242ENST00000602319 OSBPL5Q9H0X9 879 aaPredicted RBP11.68□□□□□ -0.54
HCG18-242ENST00000602319 VPS37CA5D8V6 355 aaPredicted RBP11.68□□□□□ -0.54
HCG18-242ENST00000602319 TOB2Q14106 344 aaPredicted RBP11.68□□□□□ -0.54
HCG18-242ENST00000602319 ANKRD1Q15327 319 aa11.68□□□□□ -0.54
HCG18-242ENST00000602319 CAMK4Q16566 473 aa11.68□□□□□ -0.54
HCG18-242ENST00000602319 UBXN6Q9BZV1 441 aa11.68□□□□□ -0.54
HCG18-242ENST00000602319 PRPF40BQ6NWY9 871 aaKnown RBP11.68□□□□□ -0.54
HCG18-242ENST00000602319 DHX40Q8IX18 779 aaKnown RBP11.68□□□□□ -0.54
HCG18-242ENST00000602319 CKAP2LQ8IYA6 745 aa11.68□□□□□ -0.54
HCG18-242ENST00000602319 SPATA32Q96LK8 384 aa11.68□□□□□ -0.54
HCG18-242ENST00000602319 NCAPD2Q15021 1401 aa11.68□□□□□ -0.54
HCG18-242ENST00000602319 CEMIPQ8WUJ3 1361 aa11.67□□□□□ -0.54
HCG18-242ENST00000602319 RGPD8O14715 1765 aaPredicted RBP11.67□□□□□ -0.54
HCG18-242ENST00000602319 ADAMTS7Q9UKP4 1686 aa11.67□□□□□ -0.54
HCG18-242ENST00000602319 SLU7O95391 586 aaKnown RBP11.67□□□□□ -0.54
HCG18-242ENST00000602319 TUBB4AP04350 444 aa11.67□□□□□ -0.54
HCG18-242ENST00000602319 TIGD1Q96MW7 591 aa11.67□□□□□ -0.54
HCG18-242ENST00000602319 DNAJC25Q9H1X3 360 aa11.67□□□□□ -0.54
HCG18-242ENST00000602319 FHOD1Q9Y613 1164 aa11.67□□□□□ -0.54
HCG18-242ENST00000602319 SLC27A2O14975 620 aa11.67□□□□□ -0.54
HCG18-242ENST00000602319 CTAGE5O15320 804 aa11.67□□□□□ -0.54
HCG18-242ENST00000602319 RPS6KB1P23443 525 aa11.67□□□□□ -0.54
HCG18-242ENST00000602319 CALCOCO1Q9P1Z2 691 aa11.67□□□□□ -0.54
HCG18-242ENST00000602319 SURF6O75683 361 aaKnown RBP11.66□□□□□ -0.54
HCG18-242ENST00000602319 PTPN14Q15678 1187 aa11.66□□□□□ -0.54
HCG18-242ENST00000602319 BEND3Q5T5X7 828 aa11.66□□□□□ -0.54
HCG18-242ENST00000602319 NECAB1Q8N987 351 aa11.66□□□□□ -0.54
HCG18-242ENST00000602319 EVI5LQ96CN4 794 aa11.66□□□□□ -0.54
HCG18-242ENST00000602319 IMPACTQ9P2X3 320 aa11.66□□□□□ -0.54
HCG18-242ENST00000602319 RBM8AQ9Y5S9 174 aaKnown RBP11.66□□□□□ -0.54
HCG18-242ENST00000602319 PSMA5P28066 241 aa11.66□□□□□ -0.54
HCG18-242ENST00000602319 ADD1P35611 737 aaKnown RBP11.66□□□□□ -0.54
HCG18-242ENST00000602319 STX1AQ16623 288 aa11.66□□□□□ -0.54
HCG18-242ENST00000602319 C11orf57Q6ZUT1 292 aaPredicted RBP11.66□□□□□ -0.54
HCG18-242ENST00000602319 LMTK3Q96Q04 1460 aa11.66□□□□□ -0.54
HCG18-242ENST00000602319 LTN1O94822 1766 aa11.66□□□□□ -0.54
HCG18-242ENST00000602319 ZRANB2O95218 330 aaKnown RBP eCLIP11.66□□□□□ -0.54
HCG18-242ENST00000602319 HOXB7P09629 217 aa11.66□□□□□ -0.54
HCG18-242ENST00000602319 ELF2Q15723 593 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms