RNA–Protein interactions for RNA: ENST00000602290.1

HCG18-241, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 821 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-241ENST00000602290 SETDB2Q96T68 719 aa16.16■□□□□ 0.18
HCG18-241ENST00000602290 SLC10A3P09131 477 aa16.15■□□□□ 0.18
HCG18-241ENST00000602290 CCDC102AQ96A19 550 aa16.15■□□□□ 0.18
HCG18-241ENST00000602290 HIRAP54198 1017 aaPredicted RBP16.14■□□□□ 0.17
HCG18-241ENST00000602290 CDC37L1Q7L3B6 337 aa16.14■□□□□ 0.17
HCG18-241ENST00000602290 ZNF296Q8WUU4 475 aaPredicted RBP16.14■□□□□ 0.17
HCG18-241ENST00000602290 CARD14Q9BXL6 1004 aa16.14■□□□□ 0.17
HCG18-241ENST00000602290 TBC1D2BQ9UPU7 963 aa16.14■□□□□ 0.17
HCG18-241ENST00000602290 CDHR2Q9BYE9 1310 aa16.14■□□□□ 0.17
HCG18-241ENST00000602290 LAMA3Q16787 3333 aa16.14■□□□□ 0.17
HCG18-241ENST00000602290 POTEFA5A3E0 1075 aa16.13■□□□□ 0.17
HCG18-241ENST00000602290 AEBP1Q8IUX7 1158 aa16.13■□□□□ 0.17
HCG18-241ENST00000602290 NPHP1O15259 732 aa16.12■□□□□ 0.17
HCG18-241ENST00000602290 TRPM4Q8TD43 1214 aa16.12■□□□□ 0.17
HCG18-241ENST00000602290 NPC1L1Q9UHC9 1359 aa16.12■□□□□ 0.17
HCG18-241ENST00000602290 PAPPA2Q9BXP8 1791 aa16.11■□□□□ 0.17
HCG18-241ENST00000602290 IL6STP40189 918 aaPredicted RBP16.11■□□□□ 0.17
HCG18-241ENST00000602290 MNX1P50219 401 aaPredicted RBP16.11■□□□□ 0.17
HCG18-241ENST00000602290 NOM1Q5C9Z4 860 aaKnown RBP16.11■□□□□ 0.17
HCG18-241ENST00000602290 DLK2Q6UY11 383 aa16.11■□□□□ 0.17
HCG18-241ENST00000602290 LARGE2Q8N3Y3 721 aa16.11■□□□□ 0.17
HCG18-241ENST00000602290 SIN3AQ96ST3 1273 aa16.11■□□□□ 0.17
HCG18-241ENST00000602290 GBA2Q9HCG7 927 aaPredicted RBP16.11■□□□□ 0.17
HCG18-241ENST00000602290 SLC51AQ86UW1 340 aa16.1■□□□□ 0.17
HCG18-241ENST00000602290 OTUD5Q96G74 571 aa16.1■□□□□ 0.17
HCG18-241ENST00000602290 KIAA0100Q14667 2235 aaKnown RBP16.1■□□□□ 0.17
HCG18-241ENST00000602290 UNC80Q8N2C7 3258 aa16.09■□□□□ 0.17
HCG18-241ENST00000602290 STARD3NLO95772 234 aa16.09■□□□□ 0.17
HCG18-241ENST00000602290 GMPSP49915 693 aaPredicted RBP16.09■□□□□ 0.17
HCG18-241ENST00000602290 ZNF157P51786 506 aaPredicted RBP16.09■□□□□ 0.17
HCG18-241ENST00000602290 CC2D2BQ6DHV5 1058 aa16.09■□□□□ 0.17
HCG18-241ENST00000602290 NBPF5PQ86XG9 351 aaPredicted RBP16.09■□□□□ 0.17
HCG18-241ENST00000602290 LGR6Q9HBX8 967 aa16.09■□□□□ 0.17
HCG18-241ENST00000602290 HDAC9Q9UKV0 1011 aa16.09■□□□□ 0.17
HCG18-241ENST00000602290 RIC1Q4ADV7 1423 aa16.09■□□□□ 0.17
HCG18-241ENST00000602290 ALDH1B1P30837 517 aa16.08■□□□□ 0.16
HCG18-241ENST00000602290 CRY2Q49AN0 593 aa16.08■□□□□ 0.16
HCG18-241ENST00000602290 NIM1KQ8IY84 436 aa16.08■□□□□ 0.16
HCG18-241ENST00000602290 REM2Q8IYK8 340 aaPredicted RBP16.08■□□□□ 0.16
HCG18-241ENST00000602290 CLSPNQ9HAW4 1339 aa16.08■□□□□ 0.16
HCG18-241ENST00000602290 CXCL9Q07325 125 aa16.07■□□□□ 0.16
HCG18-241ENST00000602290 USP48Q86UV5 1035 aa16.07■□□□□ 0.16
HCG18-241ENST00000602290 RASAL3Q86YV0 1011 aa16.07■□□□□ 0.16
HCG18-241ENST00000602290 RNMTO43148 476 aaKnown RBP16.06■□□□□ 0.16
HCG18-241ENST00000602290 SLC24A1O60721 1099 aa16.06■□□□□ 0.16
HCG18-241ENST00000602290 ABCC12Q96J65 1359 aa16.05■□□□□ 0.16
HCG18-241ENST00000602290 HEG1Q9ULI3 1381 aa16.05■□□□□ 0.16
HCG18-241ENST00000602290 SHTN1A0MZ66 631 aa16.04■□□□□ 0.16
HCG18-241ENST00000602290 GRIPAP1Q4V328 841 aa16.04■□□□□ 0.16
HCG18-241ENST00000602290 INTS3Q68E01 1043 aaKnown RBP16.04■□□□□ 0.16
HCG18-241ENST00000602290 CLEC4GQ6UXB4 293 aa16.04■□□□□ 0.16
HCG18-241ENST00000602290 C2orf69Q8N8R5 385 aa16.04■□□□□ 0.16
HCG18-241ENST00000602290 BCL11AQ9H165 835 aa16.04■□□□□ 0.16
HCG18-241ENST00000602290 ZNF330Q9Y3S2 320 aaPredicted RBP16.04■□□□□ 0.16
HCG18-241ENST00000602290 VCANP13611 3396 aa16.03■□□□□ 0.16
HCG18-241ENST00000602290 GPR25O00155 361 aa16.03■□□□□ 0.16
HCG18-241ENST00000602290 TBC1D8O95759 1140 aa16.03■□□□□ 0.16
HCG18-241ENST00000602290 DZIP3Q86Y13 1208 aaKnown RBP16.03■□□□□ 0.16
HCG18-241ENST00000602290 SPTBN5Q9NRC6 3674 aaKnown RBP16.02■□□□□ 0.16
HCG18-241ENST00000602290 PPIP5K2O43314 1243 aa16.02■□□□□ 0.16
HCG18-241ENST00000602290 AOC3Q16853 763 aa16.02■□□□□ 0.16
HCG18-241ENST00000602290 ZNF496Q96IT1 587 aaPredicted RBP16.02■□□□□ 0.16
HCG18-241ENST00000602290 ZNRF3Q9ULT6 936 aa16.02■□□□□ 0.16
HCG18-241ENST00000602290 KIF7Q2M1P5 1343 aa16.01■□□□□ 0.15
HCG18-241ENST00000602290 ADM5C9JUS6 153 aa16.01■□□□□ 0.15
HCG18-241ENST00000602290 KRT26Q7Z3Y9 468 aa16.01■□□□□ 0.15
HCG18-241ENST00000602290 CFHR5Q9BXR6 569 aa16.01■□□□□ 0.15
HCG18-241ENST00000602290 HOXA10P31260 410 aaPredicted RBP16■□□□□ 0.15
HCG18-241ENST00000602290 TPTE2Q6XPS3 522 aa16■□□□□ 0.15
HCG18-241ENST00000602290 VPS33BQ9H267 617 aa16■□□□□ 0.15
HCG18-241ENST00000602290 H0YGN5 161 aa15.99■□□□□ 0.15
HCG18-241ENST00000602290 RGL2O15211 777 aa15.99■□□□□ 0.15
HCG18-241ENST00000602290 A1BGP04217 495 aa15.99■□□□□ 0.15
HCG18-241ENST00000602290 EN2P19622 333 aaPredicted RBP15.99■□□□□ 0.15
HCG18-241ENST00000602290 TEX13AQ9BXU3 409 aaPredicted RBP15.99■□□□□ 0.15
HCG18-241ENST00000602290 SULT6B1Q6IMI4 303 aa15.98■□□□□ 0.15
HCG18-241ENST00000602290 CHRDL2Q6WN34 429 aa15.98■□□□□ 0.15
HCG18-241ENST00000602290 PRO3102Q9H379 93 aa15.98■□□□□ 0.15
HCG18-241ENST00000602290 RBM27Q9P2N5 1060 aaKnown RBP15.98■□□□□ 0.15
HCG18-241ENST00000602290 SIPA1L3O60292 1781 aaPredicted RBP15.98■□□□□ 0.15
HCG18-241ENST00000602290 FKTNO75072 461 aa15.97■□□□□ 0.15
HCG18-241ENST00000602290 EGFRP00533 1210 aa15.97■□□□□ 0.15
HCG18-241ENST00000602290 MICALL2Q8IY33 904 aa15.97■□□□□ 0.15
HCG18-241ENST00000602290 ARMC5Q96C12 935 aa15.97■□□□□ 0.15
HCG18-241ENST00000602290 RTFDC1Q9BY42 306 aaPredicted RBP15.97■□□□□ 0.15
HCG18-241ENST00000602290 CNOT7Q9UIV1 285 aaKnown RBP15.97■□□□□ 0.15
HCG18-241ENST00000602290 TTC5Q8N0Z6 440 aa15.96■□□□□ 0.15
HCG18-241ENST00000602290 BCL2L13Q9BXK5 485 aa15.96■□□□□ 0.15
HCG18-241ENST00000602290 NIP7Q9Y221 180 aaKnown RBP eCLIP15.96■□□□□ 0.15
HCG18-241ENST00000602290 ZNF652Q9Y2D9 606 aa15.96■□□□□ 0.15
HCG18-241ENST00000602290 PPEF1O14829 653 aaPredicted RBP15.95■□□□□ 0.14
HCG18-241ENST00000602290 R3HDMLQ9H3Y0 253 aa15.95■□□□□ 0.14
HCG18-241ENST00000602290 YDJCA8MPS7 323 aa15.94■□□□□ 0.14
HCG18-241ENST00000602290 RAD17O75943 681 aa15.94■□□□□ 0.14
HCG18-241ENST00000602290 TNNT2P45379 298 aaPredicted RBP15.94■□□□□ 0.14
HCG18-241ENST00000602290 TM4SF4P48230 202 aa15.94■□□□□ 0.14
HCG18-241ENST00000602290 ZNF790Q6PG37 636 aa15.94■□□□□ 0.14
HCG18-241ENST00000602290 ERICH6Q7L0X2 663 aa15.94■□□□□ 0.14
HCG18-241ENST00000602290 OTOP1Q7RTM1 612 aa15.94■□□□□ 0.14
HCG18-241ENST00000602290 SAMD7Q7Z3H4 446 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms