RNA–Protein interactions for RNA: ENST00000602263.5

FARP1-240, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 867 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-240ENST00000602263 POTEJP0CG39 1038 aa13.72□□□□□ -0.21
FARP1-240ENST00000602263 EIF2S2P20042 333 aaKnown RBP13.72□□□□□ -0.21
FARP1-240ENST00000602263 HOXA10P31260 410 aaPredicted RBP13.72□□□□□ -0.21
FARP1-240ENST00000602263 EAPPQ56P03 285 aaPredicted RBP13.72□□□□□ -0.21
FARP1-240ENST00000602263 SUSD4Q5VX71 490 aa13.72□□□□□ -0.21
FARP1-240ENST00000602263 ZNF34Q8IZ26 560 aa13.72□□□□□ -0.21
FARP1-240ENST00000602263 RBM17Q96I25 401 aaKnown RBP13.72□□□□□ -0.21
FARP1-240ENST00000602263 TMX4Q9H1E5 349 aaPredicted RBP13.72□□□□□ -0.21
FARP1-240ENST00000602263 NTSR2O95665 410 aa13.71□□□□□ -0.21
FARP1-240ENST00000602263 HSPA1AP0DMV8 641 aaKnown RBP13.71□□□□□ -0.21
FARP1-240ENST00000602263 HSPA1BP0DMV9 641 aaKnown RBP13.71□□□□□ -0.21
FARP1-240ENST00000602263 EIF6P56537 245 aaKnown RBP13.71□□□□□ -0.21
FARP1-240ENST00000602263 CRAMP1Q96RY5 1269 aa13.71□□□□□ -0.21
FARP1-240ENST00000602263 CLEC11AQ9Y240 323 aa13.71□□□□□ -0.21
FARP1-240ENST00000602263 LAMB2P55268 1798 aa13.71□□□□□ -0.22
FARP1-240ENST00000602263 MYBBP1AQ9BQG0 1328 aaKnown RBP13.7□□□□□ -0.22
FARP1-240ENST00000602263 FZD9O00144 591 aa13.7□□□□□ -0.22
FARP1-240ENST00000602263 PPEF1O14829 653 aaPredicted RBP13.7□□□□□ -0.22
FARP1-240ENST00000602263 EPHX2P34913 555 aa13.7□□□□□ -0.22
FARP1-240ENST00000602263 TMPOP42166 694 aaKnown RBP13.7□□□□□ -0.22
FARP1-240ENST00000602263 HSP90AB3PQ58FF7 597 aa13.7□□□□□ -0.22
FARP1-240ENST00000602263 COL13A1Q5TAT6 717 aaPredicted RBP13.7□□□□□ -0.22
FARP1-240ENST00000602263 PNMA8AQ86V59 439 aaPredicted RBP13.7□□□□□ -0.22
FARP1-240ENST00000602263 GPC2Q8N158 579 aa13.7□□□□□ -0.22
FARP1-240ENST00000602263 NLRP3Q96P20 1036 aa13.7□□□□□ -0.22
FARP1-240ENST00000602263 MKRN1Q9UHC7 482 aaKnown RBP13.7□□□□□ -0.22
FARP1-240ENST00000602263 SNED1Q8TER0 1413 aa13.7□□□□□ -0.22
FARP1-240ENST00000602263 ADAMTSL1Q8N6G6 1762 aa13.7□□□□□ -0.22
FARP1-240ENST00000602263 RNF123Q5XPI4 1314 aa13.69□□□□□ -0.22
FARP1-240ENST00000602263 LMOD1P29536 600 aaPredicted RBP13.69□□□□□ -0.22
FARP1-240ENST00000602263 WDR43Q15061 677 aaKnown RBP eCLIP13.69□□□□□ -0.22
FARP1-240ENST00000602263 TNS4Q8IZW8 715 aa13.69□□□□□ -0.22
FARP1-240ENST00000602263 LARGE2Q8N3Y3 721 aa13.69□□□□□ -0.22
FARP1-240ENST00000602263 UTP14AQ9BVJ6 771 aaKnown RBP13.69□□□□□ -0.22
FARP1-240ENST00000602263 PASKQ96RG2 1323 aa13.68□□□□□ -0.22
FARP1-240ENST00000602263 TCERG1O14776 1098 aaKnown RBP13.68□□□□□ -0.22
FARP1-240ENST00000602263 PDIA6Q15084 440 aa13.68□□□□□ -0.22
FARP1-240ENST00000602263 NEUROD2Q15784 382 aa13.68□□□□□ -0.22
FARP1-240ENST00000602263 GJA3Q9Y6H8 435 aa13.68□□□□□ -0.22
FARP1-240ENST00000602263 TMEM88BA6NKF7 163 aa13.67□□□□□ -0.22
FARP1-240ENST00000602263 ANXA1P04083 346 aa13.67□□□□□ -0.22
FARP1-240ENST00000602263 AIMP1Q12904 312 aaKnown RBP13.67□□□□□ -0.22
FARP1-240ENST00000602263 DDX10Q13206 875 aaKnown RBP13.67□□□□□ -0.22
FARP1-240ENST00000602263 PROSER3Q2NL68 480 aa13.67□□□□□ -0.22
FARP1-240ENST00000602263 LRP10Q7Z4F1 713 aa13.67□□□□□ -0.22
FARP1-240ENST00000602263 NIM1KQ8IY84 436 aa13.67□□□□□ -0.22
FARP1-240ENST00000602263 CCDC146Q8IYE0 955 aa13.67□□□□□ -0.22
FARP1-240ENST00000602263 NECTIN2Q92692 538 aa13.67□□□□□ -0.22
FARP1-240ENST00000602263 CNTNAP1P78357 1384 aa13.67□□□□□ -0.22
FARP1-240ENST00000602263 TRPM7Q96QT4 1865 aa13.67□□□□□ -0.22
FARP1-240ENST00000602263 C3orf67Q6ZVT6 689 aa13.66□□□□□ -0.22
FARP1-240ENST00000602263 COPS6Q7L5N1 327 aa13.66□□□□□ -0.22
FARP1-240ENST00000602263 XAGE3Q8WTP9 111 aa13.66□□□□□ -0.22
FARP1-240ENST00000602263 RUNDC1Q96C34 613 aa13.66□□□□□ -0.22
FARP1-240ENST00000602263 LAS1LQ9Y4W2 734 aaKnown RBP13.66□□□□□ -0.22
FARP1-240ENST00000602263 COL4A5P29400 1685 aa13.66□□□□□ -0.22
FARP1-240ENST00000602263 ABCC4O15439 1325 aa13.65□□□□□ -0.22
FARP1-240ENST00000602263 PPIP5K2O43314 1243 aa13.65□□□□□ -0.22
FARP1-240ENST00000602263 ITGBL1O95965 494 aaPredicted RBP13.65□□□□□ -0.22
FARP1-240ENST00000602263 SLC10A5Q5PT55 438 aa13.65□□□□□ -0.22
FARP1-240ENST00000602263 CNTROBQ8N137 903 aa13.65□□□□□ -0.22
FARP1-240ENST00000602263 SUPT20HQ8NEM7 779 aa13.65□□□□□ -0.22
FARP1-240ENST00000602263 DDX21Q9NR30 783 aaKnown RBP eCLIP13.65□□□□□ -0.22
FARP1-240ENST00000602263 ATP6V0A2Q9Y487 856 aa13.65□□□□□ -0.22
FARP1-240ENST00000602263 LTBP1Q14766 1721 aa13.64□□□□□ -0.23
FARP1-240ENST00000602263 TAF1P21675 1872 aa13.64□□□□□ -0.23
FARP1-240ENST00000602263 CHL1O00533 1208 aa13.64□□□□□ -0.23
FARP1-240ENST00000602263 MAP1SQ66K74 1059 aaPredicted RBP13.64□□□□□ -0.23
FARP1-240ENST00000602263 DDX46Q7L014 1031 aaKnown RBP13.64□□□□□ -0.23
FARP1-240ENST00000602263 NLRP10Q86W26 655 aa13.64□□□□□ -0.23
FARP1-240ENST00000602263 AIDAQ96BJ3 306 aa13.64□□□□□ -0.23
FARP1-240ENST00000602263 VPS33BQ9H267 617 aa13.64□□□□□ -0.23
FARP1-240ENST00000602263 TRMT112Q9UI30 125 aaKnown RBP13.64□□□□□ -0.23
FARP1-240ENST00000602263 SH3TC1Q8TE82 1336 aa13.64□□□□□ -0.23
FARP1-240ENST00000602263 CAPN15O75808 1086 aa13.63□□□□□ -0.23
FARP1-240ENST00000602263 BBOX1O75936 387 aa13.63□□□□□ -0.23
FARP1-240ENST00000602263 TCIRG1Q13488 830 aa13.63□□□□□ -0.23
FARP1-240ENST00000602263 AOC3Q16853 763 aa13.63□□□□□ -0.23
FARP1-240ENST00000602263 HDGFL1Q5TGJ6 251 aa13.63□□□□□ -0.23
FARP1-240ENST00000602263 DPP8Q6V1X1 898 aaPredicted RBP13.63□□□□□ -0.23
FARP1-240ENST00000602263 DDX60Q8IY21 1712 aaKnown RBP13.63□□□□□ -0.23
FARP1-240ENST00000602263 HOXB7P09629 217 aa13.62□□□□□ -0.23
FARP1-240ENST00000602263 HCLS1P14317 486 aaPredicted RBP13.62□□□□□ -0.23
FARP1-240ENST00000602263 SCNN1DP51172 638 aa13.62□□□□□ -0.23
FARP1-240ENST00000602263 MPNDQ8N594 471 aa13.62□□□□□ -0.23
FARP1-240ENST00000602263 CHPF2Q9P2E5 772 aa13.62□□□□□ -0.23
FARP1-240ENST00000602263 ABT1Q9ULW3 272 aaKnown RBP13.62□□□□□ -0.23
FARP1-240ENST00000602263 TRIM35Q9UPQ4 493 aa13.62□□□□□ -0.23
FARP1-240ENST00000602263 VEGFBP49765 207 aa13.61□□□□□ -0.23
FARP1-240ENST00000602263 KRT24Q2M2I5 525 aa13.61□□□□□ -0.23
FARP1-240ENST00000602263 USP50Q70EL3 339 aaPredicted RBP13.61□□□□□ -0.23
FARP1-240ENST00000602263 SLC51AQ86UW1 340 aa13.61□□□□□ -0.23
FARP1-240ENST00000602263 SP8Q8IXZ3 490 aa13.61□□□□□ -0.23
FARP1-240ENST00000602263 PLBD2Q8NHP8 589 aa13.61□□□□□ -0.23
FARP1-240ENST00000602263 RTFDC1Q9BY42 306 aaPredicted RBP13.61□□□□□ -0.23
FARP1-240ENST00000602263 DBF4Q9UBU7 674 aaPredicted RBP13.61□□□□□ -0.23
FARP1-240ENST00000602263 ZNRF3Q9ULT6 936 aa13.61□□□□□ -0.23
FARP1-240ENST00000602263 LRRC37AA6NMS7 1700 aa13.61□□□□□ -0.23
FARP1-240ENST00000602263 EPS15P42566 896 aa13.6□□□□□ -0.23
FARP1-240ENST00000602263 GRAPQ13588 217 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms