RNA–Protein interactions for RNA: ENST00000601009.1

FARP1-232, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-232ENST00000601009 SUSD4Q5VX71 490 aa11.95□□□□□ -0.5
FARP1-232ENST00000601009 JDP2Q8WYK2 163 aa11.95□□□□□ -0.5
FARP1-232ENST00000601009 CFAP44Q96MT7 982 aa11.95□□□□□ -0.5
FARP1-232ENST00000601009 CRAMP1Q96RY5 1269 aa11.95□□□□□ -0.5
FARP1-232ENST00000601009 PSMD1Q99460 953 aa11.95□□□□□ -0.5
FARP1-232ENST00000601009 CHMP4AQ9BY43 222 aa11.95□□□□□ -0.5
FARP1-232ENST00000601009 ANKRD36CQ5JPF3 1778 aa11.95□□□□□ -0.5
FARP1-232ENST00000601009 ZEB1P37275 1124 aaPredicted RBP11.94□□□□□ -0.5
FARP1-232ENST00000601009 IARSP41252 1262 aaKnown RBP11.94□□□□□ -0.5
FARP1-232ENST00000601009 PDIA6Q15084 440 aa11.94□□□□□ -0.5
FARP1-232ENST00000601009 HDGFL1Q5TGJ6 251 aa11.94□□□□□ -0.5
FARP1-232ENST00000601009 COPS6Q7L5N1 327 aa11.94□□□□□ -0.5
FARP1-232ENST00000601009 KLRG1Q96E93 195 aa11.94□□□□□ -0.5
FARP1-232ENST00000601009 ZNF277Q9NRM2 450 aaPredicted RBP11.94□□□□□ -0.5
FARP1-232ENST00000601009 TRIM35Q9UPQ4 493 aa11.94□□□□□ -0.5
FARP1-232ENST00000601009 SCN4AP35499 1836 aa11.94□□□□□ -0.5
FARP1-232ENST00000601009 PPEF1O14829 653 aaPredicted RBP11.93□□□□□ -0.5
FARP1-232ENST00000601009 DDNO94850 711 aaPredicted RBP11.93□□□□□ -0.5
FARP1-232ENST00000601009 AIMP1Q12904 312 aaKnown RBP11.93□□□□□ -0.5
FARP1-232ENST00000601009 PROSER3Q2NL68 480 aa11.93□□□□□ -0.5
FARP1-232ENST00000601009 LRP10Q7Z4F1 713 aa11.93□□□□□ -0.5
FARP1-232ENST00000601009 SYNE4Q8N205 404 aa11.93□□□□□ -0.5
FARP1-232ENST00000601009 DNAJC5GQ8N7S2 189 aa11.93□□□□□ -0.5
FARP1-232ENST00000601009 XAGE3Q8WTP9 111 aa11.93□□□□□ -0.5
FARP1-232ENST00000601009 NECTIN2Q92692 538 aa11.93□□□□□ -0.5
FARP1-232ENST00000601009 L3MBTL3Q96JM7 780 aaPredicted RBP11.93□□□□□ -0.5
FARP1-232ENST00000601009 DBF4Q9UBU7 674 aaPredicted RBP11.93□□□□□ -0.5
FARP1-232ENST00000601009 POTECB2RU33 542 aa11.92□□□□□ -0.5
FARP1-232ENST00000601009 ANXA1P04083 346 aa11.92□□□□□ -0.5
FARP1-232ENST00000601009 EIF6P56537 245 aaKnown RBP11.92□□□□□ -0.5
FARP1-232ENST00000601009 GNAI1P63096 354 aa11.92□□□□□ -0.5
FARP1-232ENST00000601009 TCIRG1Q13488 830 aa11.92□□□□□ -0.5
FARP1-232ENST00000601009 SLC10A5Q5PT55 438 aa11.92□□□□□ -0.5
FARP1-232ENST00000601009 CHADLQ6NUI6 762 aa11.92□□□□□ -0.5
FARP1-232ENST00000601009 HYPKQ9NX55 129 aa11.92□□□□□ -0.5
FARP1-232ENST00000601009 CHPF2Q9P2E5 772 aa11.92□□□□□ -0.5
FARP1-232ENST00000601009 PCNTO95613 3336 aa11.92□□□□□ -0.5
FARP1-232ENST00000601009 SH3TC1Q8TE82 1336 aa11.91□□□□□ -0.5
FARP1-232ENST00000601009 OLFM4Q6UX06 510 aa11.91□□□□□ -0.5
FARP1-232ENST00000601009 NLRP10Q86W26 655 aa11.91□□□□□ -0.5
FARP1-232ENST00000601009 LDHDQ86WU2 507 aa11.91□□□□□ -0.5
FARP1-232ENST00000601009 GPC2Q8N158 579 aa11.91□□□□□ -0.5
FARP1-232ENST00000601009 SUPT20HQ8NEM7 779 aa11.91□□□□□ -0.5
FARP1-232ENST00000601009 PLBD2Q8NHP8 589 aa11.91□□□□□ -0.5
FARP1-232ENST00000601009 IFT57Q9NWB7 429 aa11.91□□□□□ -0.5
FARP1-232ENST00000601009 TRMT112Q9UI30 125 aaKnown RBP11.91□□□□□ -0.5
FARP1-232ENST00000601009 HACL1Q9UJ83 578 aa11.91□□□□□ -0.5
FARP1-232ENST00000601009 FZD9O00144 591 aa11.9□□□□□ -0.5
FARP1-232ENST00000601009 APAF1O14727 1248 aa11.9□□□□□ -0.5
FARP1-232ENST00000601009 HSP90B1P14625 803 aaKnown RBP11.9□□□□□ -0.5
FARP1-232ENST00000601009 DUSP27Q5VZP5 1158 aa11.9□□□□□ -0.5
FARP1-232ENST00000601009 ANKRD13DQ6ZTN6 518 aa11.9□□□□□ -0.5
FARP1-232ENST00000601009 DDX46Q7L014 1031 aaKnown RBP11.9□□□□□ -0.5
FARP1-232ENST00000601009 TMC4Q7Z404 712 aa11.9□□□□□ -0.5
FARP1-232ENST00000601009 PNMA8AQ86V59 439 aaPredicted RBP11.9□□□□□ -0.5
FARP1-232ENST00000601009 LARGE2Q8N3Y3 721 aa11.9□□□□□ -0.5
FARP1-232ENST00000601009 VPS33BQ9H267 617 aa11.9□□□□□ -0.5
FARP1-232ENST00000601009 TAF1DQ9H5J8 278 aaPredicted RBP11.9□□□□□ -0.5
FARP1-232ENST00000601009 ZNF541Q9H0D2 1346 aa11.89□□□□□ -0.51
FARP1-232ENST00000601009 SNED1Q8TER0 1413 aa11.89□□□□□ -0.51
FARP1-232ENST00000601009 BBOX1O75936 387 aa11.89□□□□□ -0.51
FARP1-232ENST00000601009 LMOD1P29536 600 aaPredicted RBP11.89□□□□□ -0.51
FARP1-232ENST00000601009 HTRA3P83110 453 aa11.89□□□□□ -0.51
FARP1-232ENST00000601009 GOLGA2Q08379 1002 aa11.89□□□□□ -0.51
FARP1-232ENST00000601009 KRT24Q2M2I5 525 aa11.89□□□□□ -0.51
FARP1-232ENST00000601009 NIM1KQ8IY84 436 aa11.89□□□□□ -0.51
FARP1-232ENST00000601009 JMYQ8N9B5 988 aa11.89□□□□□ -0.51
FARP1-232ENST00000601009 MBIPQ9NS73 344 aa11.89□□□□□ -0.51
FARP1-232ENST00000601009 ATP6V0A2Q9Y487 856 aa11.89□□□□□ -0.51
FARP1-232ENST00000601009 ABCC4O15439 1325 aa11.88□□□□□ -0.51
FARP1-232ENST00000601009 TCERG1O14776 1098 aaKnown RBP11.88□□□□□ -0.51
FARP1-232ENST00000601009 EPHX2P34913 555 aa11.88□□□□□ -0.51
FARP1-232ENST00000601009 EAPPQ56P03 285 aaPredicted RBP11.88□□□□□ -0.51
FARP1-232ENST00000601009 PPIP5K2O43314 1243 aa11.87□□□□□ -0.51
FARP1-232ENST00000601009 ZNF853P0CG23 659 aa11.87□□□□□ -0.51
FARP1-232ENST00000601009 HCLS1P14317 486 aaPredicted RBP11.87□□□□□ -0.51
FARP1-232ENST00000601009 GRAPQ13588 217 aa11.87□□□□□ -0.51
FARP1-232ENST00000601009 IFFO2Q5TF58 517 aa11.87□□□□□ -0.51
FARP1-232ENST00000601009 DPP8Q6V1X1 898 aaPredicted RBP11.87□□□□□ -0.51
FARP1-232ENST00000601009 C3orf67Q6ZVT6 689 aa11.87□□□□□ -0.51
FARP1-232ENST00000601009 RIC3Q7Z5B4 369 aa11.87□□□□□ -0.51
FARP1-232ENST00000601009 SP8Q8IXZ3 490 aa11.87□□□□□ -0.51
FARP1-232ENST00000601009 GRAPLQ8TC17 118 aaPredicted RBP11.87□□□□□ -0.51
FARP1-232ENST00000601009 CREBZFQ9NS37 354 aa11.87□□□□□ -0.51
FARP1-232ENST00000601009 CLEC11AQ9Y240 323 aa11.87□□□□□ -0.51
FARP1-232ENST00000601009 GJA3Q9Y6H8 435 aa11.87□□□□□ -0.51
FARP1-232ENST00000601009 LAMB2P55268 1798 aa11.87□□□□□ -0.51
FARP1-232ENST00000601009 DDX58O95786 925 aaKnown RBP11.86□□□□□ -0.51
FARP1-232ENST00000601009 MPNDQ8N594 471 aa11.86□□□□□ -0.51
FARP1-232ENST00000601009 ISCA1Q9BUE6 129 aa11.86□□□□□ -0.51
FARP1-232ENST00000601009 TRIM28Q13263 835 aaKnown RBP11.85□□□□□ -0.51
FARP1-232ENST00000601009 CCDC30Q5VVM6 783 aa11.85□□□□□ -0.51
FARP1-232ENST00000601009 RTFDC1Q9BY42 306 aaPredicted RBP11.85□□□□□ -0.51
FARP1-232ENST00000601009 ATP5J2-PTCD1G3V325 749 aa11.84□□□□□ -0.51
FARP1-232ENST00000601009 ANP32CO43423 234 aa11.84□□□□□ -0.51
FARP1-232ENST00000601009 POTEIP0CG38 1075 aa11.84□□□□□ -0.51
FARP1-232ENST00000601009 POTEJP0CG39 1038 aa11.84□□□□□ -0.51
FARP1-232ENST00000601009 AOC3Q16853 763 aa11.84□□□□□ -0.51
FARP1-232ENST00000601009 ZNRF3Q9ULT6 936 aa11.84□□□□□ -0.51
FARP1-232ENST00000601009 PASKQ96RG2 1323 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms