RNA–Protein interactions for RNA: ENST00000600447.1

PPFIA4-212, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 385 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-212ENST00000600447 DBF4Q9UBU7 674 aaPredicted RBP18.71■□□□□ 0.59
PPFIA4-212ENST00000600447 TAOK3Q9H2K8 898 aa18.7■□□□□ 0.58
PPFIA4-212ENST00000600447 CCDC27Q2M243 656 aa18.69■□□□□ 0.58
PPFIA4-212ENST00000600447 UTP14AQ9BVJ6 771 aaKnown RBP18.69■□□□□ 0.58
PPFIA4-212ENST00000600447 HYPKQ9NX55 129 aa18.69■□□□□ 0.58
PPFIA4-212ENST00000600447 RNF123Q5XPI4 1314 aa18.69■□□□□ 0.58
PPFIA4-212ENST00000600447 TOMM70O94826 608 aa18.68■□□□□ 0.58
PPFIA4-212ENST00000600447 HOXA10P31260 410 aaPredicted RBP18.68■□□□□ 0.58
PPFIA4-212ENST00000600447 TCIRG1Q13488 830 aa18.68■□□□□ 0.58
PPFIA4-212ENST00000600447 CCDC93Q567U6 631 aa18.68■□□□□ 0.58
PPFIA4-212ENST00000600447 LAMB2P55268 1798 aa18.68■□□□□ 0.58
PPFIA4-212ENST00000600447 GLTPD2A6NH11 291 aa18.67■□□□□ 0.58
PPFIA4-212ENST00000600447 NCBP3Q53F19 620 aaKnown RBP18.67■□□□□ 0.58
PPFIA4-212ENST00000600447 SLC10A5Q5PT55 438 aa18.67■□□□□ 0.58
PPFIA4-212ENST00000600447 NLRP10Q86W26 655 aa18.67■□□□□ 0.58
PPFIA4-212ENST00000600447 PLBD2Q8NHP8 589 aa18.67■□□□□ 0.58
PPFIA4-212ENST00000600447 RPGRQ92834 1020 aaKnown RBP18.67■□□□□ 0.58
PPFIA4-212ENST00000600447 ANKRD13DQ6ZTN6 518 aa18.66■□□□□ 0.58
PPFIA4-212ENST00000600447 WWC1Q8IX03 1113 aa18.65■□□□□ 0.58
PPFIA4-212ENST00000600447 C16orf71Q8IYS4 520 aaPredicted RBP18.65■□□□□ 0.58
PPFIA4-212ENST00000600447 RTKN2Q8IZC4 609 aa18.65■□□□□ 0.58
PPFIA4-212ENST00000600447 RBM17Q96I25 401 aaKnown RBP18.65■□□□□ 0.58
PPFIA4-212ENST00000600447 NLRP3Q96P20 1036 aa18.65■□□□□ 0.58
PPFIA4-212ENST00000600447 CHMP4AQ9BY43 222 aa18.65■□□□□ 0.58
PPFIA4-212ENST00000600447 RRAGCQ9HB90 399 aa18.65■□□□□ 0.58
PPFIA4-212ENST00000600447 WDR90Q96KV7 1748 aa18.64■□□□□ 0.57
PPFIA4-212ENST00000600447 HSPA6P17066 643 aa18.64■□□□□ 0.57
PPFIA4-212ENST00000600447 FKBP4Q02790 459 aaKnown RBP eCLIP18.64■□□□□ 0.57
PPFIA4-212ENST00000600447 DPY19L2Q6NUT2 758 aa18.64■□□□□ 0.57
PPFIA4-212ENST00000600447 OLFM4Q6UX06 510 aa18.64■□□□□ 0.57
PPFIA4-212ENST00000600447 C3orf67Q6ZVT6 689 aa18.64■□□□□ 0.57
PPFIA4-212ENST00000600447 C8orf58Q8NAV2 365 aa18.64■□□□□ 0.57
PPFIA4-212ENST00000600447 RBM46Q8TBY0 533 aaKnown RBP18.64■□□□□ 0.57
PPFIA4-212ENST00000600447 CRAMP1Q96RY5 1269 aa18.64■□□□□ 0.57
PPFIA4-212ENST00000600447 SNED1Q8TER0 1413 aa18.64■□□□□ 0.57
PPFIA4-212ENST00000600447 ELL2O00472 640 aaPredicted RBP18.63■□□□□ 0.57
PPFIA4-212ENST00000600447 CC2D2BQ6DHV5 1058 aa18.63■□□□□ 0.57
PPFIA4-212ENST00000600447 TRMT112Q9UI30 125 aaKnown RBP18.63■□□□□ 0.57
PPFIA4-212ENST00000600447 IL16Q14005 1332 aa18.63■□□□□ 0.57
PPFIA4-212ENST00000600447 ISCA1Q9BUE6 129 aa18.62■□□□□ 0.57
PPFIA4-212ENST00000600447 SH3TC1Q8TE82 1336 aa18.62■□□□□ 0.57
PPFIA4-212ENST00000600447 DDX60Q8IY21 1712 aaKnown RBP18.62■□□□□ 0.57
PPFIA4-212ENST00000600447 VEGFAP15692 232 aaPredicted RBP18.61■□□□□ 0.57
PPFIA4-212ENST00000600447 GRIPAP1Q4V328 841 aa18.61■□□□□ 0.57
PPFIA4-212ENST00000600447 TSR2Q969E8 191 aaKnown RBP18.61■□□□□ 0.57
PPFIA4-212ENST00000600447 PSMD1Q99460 953 aa18.61■□□□□ 0.57
PPFIA4-212ENST00000600447 PPEF1O14829 653 aaPredicted RBP18.6■□□□□ 0.57
PPFIA4-212ENST00000600447 HCLS1P14317 486 aaPredicted RBP18.6■□□□□ 0.57
PPFIA4-212ENST00000600447 GOLGA2Q08379 1002 aa18.6■□□□□ 0.57
PPFIA4-212ENST00000600447 TRIM28Q13263 835 aaKnown RBP18.6■□□□□ 0.57
PPFIA4-212ENST00000600447 CCDC30Q5VVM6 783 aa18.6■□□□□ 0.57
PPFIA4-212ENST00000600447 SYNE4Q8N205 404 aa18.6■□□□□ 0.57
PPFIA4-212ENST00000600447 TSPYL6Q8N831 410 aa18.6■□□□□ 0.57
PPFIA4-212ENST00000600447 PHAXQ9H814 394 aaKnown RBP18.6■□□□□ 0.57
PPFIA4-212ENST00000600447 ZNF277Q9NRM2 450 aaPredicted RBP18.6■□□□□ 0.57
PPFIA4-212ENST00000600447 FSTL1Q12841 308 aa18.59■□□□□ 0.57
PPFIA4-212ENST00000600447 CACNA1FO60840 1977 aa18.59■□□□□ 0.57
PPFIA4-212ENST00000600447 POTECB2RU33 542 aa18.58■□□□□ 0.56
PPFIA4-212ENST00000600447 ATP5J2-PTCD1G3V325 749 aa18.58■□□□□ 0.56
PPFIA4-212ENST00000600447 RIC3Q7Z5B4 369 aa18.58■□□□□ 0.56
PPFIA4-212ENST00000600447 TAF1P21675 1872 aa18.58■□□□□ 0.56
PPFIA4-212ENST00000600447 ABCC4O15439 1325 aa18.57■□□□□ 0.56
PPFIA4-212ENST00000600447 IARSP41252 1262 aaKnown RBP18.57■□□□□ 0.56
PPFIA4-212ENST00000600447 WDR63Q8IWG1 891 aa18.57■□□□□ 0.56
PPFIA4-212ENST00000600447 SCN4AP35499 1836 aa18.57■□□□□ 0.56
PPFIA4-212ENST00000600447 BBOX1O75936 387 aa18.56■□□□□ 0.56
PPFIA4-212ENST00000600447 DDX58O95786 925 aaKnown RBP18.56■□□□□ 0.56
PPFIA4-212ENST00000600447 APLP1P51693 650 aa18.56■□□□□ 0.56
PPFIA4-212ENST00000600447 ATP6V0A2Q9Y487 856 aa18.56■□□□□ 0.56
PPFIA4-212ENST00000600447 DDNO94850 711 aaPredicted RBP18.55■□□□□ 0.56
PPFIA4-212ENST00000600447 TWISTNBQ3B726 338 aaPredicted RBP18.55■□□□□ 0.56
PPFIA4-212ENST00000600447 DDX46Q7L014 1031 aaKnown RBP18.55■□□□□ 0.56
PPFIA4-212ENST00000600447 SMC1BQ8NDV3 1235 aa18.55■□□□□ 0.56
PPFIA4-212ENST00000600447 ZNF428Q96B54 188 aa18.55■□□□□ 0.56
PPFIA4-212ENST00000600447 FAM89AQ96GI7 184 aa18.55■□□□□ 0.56
PPFIA4-212ENST00000600447 TMX4Q9H1E5 349 aaPredicted RBP18.55■□□□□ 0.56
PPFIA4-212ENST00000600447 FZD9O00144 591 aa18.54■□□□□ 0.56
PPFIA4-212ENST00000600447 TCERG1O14776 1098 aaKnown RBP18.54■□□□□ 0.56
PPFIA4-212ENST00000600447 SLC51AQ86UW1 340 aa18.54■□□□□ 0.56
PPFIA4-212ENST00000600447 FAM9BQ8IZU0 186 aa18.54■□□□□ 0.56
PPFIA4-212ENST00000600447 STK31Q9BXU1 1019 aa18.54■□□□□ 0.56
PPFIA4-212ENST00000600447 FANCIQ9NVI1 1328 aa18.53■□□□□ 0.56
PPFIA4-212ENST00000600447 LRRC37AA6NMS7 1700 aa18.53■□□□□ 0.56
PPFIA4-212ENST00000600447 GRAPQ13588 217 aa18.53■□□□□ 0.56
PPFIA4-212ENST00000600447 SP8Q8IXZ3 490 aa18.53■□□□□ 0.56
PPFIA4-212ENST00000600447 CCDC191Q8NCU4 936 aa18.53■□□□□ 0.56
PPFIA4-212ENST00000600447 GRAPLQ8TC17 118 aaPredicted RBP18.53■□□□□ 0.56
PPFIA4-212ENST00000600447 JDP2Q8WYK2 163 aa18.53■□□□□ 0.56
PPFIA4-212ENST00000600447 L3MBTL3Q96JM7 780 aaPredicted RBP18.53■□□□□ 0.56
PPFIA4-212ENST00000600447 MYD88Q99836 296 aa18.53■□□□□ 0.56
PPFIA4-212ENST00000600447 METTL22Q9BUU2 404 aaPredicted RBP18.53■□□□□ 0.56
PPFIA4-212ENST00000600447 SALL2Q9Y467 1007 aaPredicted RBP18.53■□□□□ 0.56
PPFIA4-212ENST00000600447 COL4A5P29400 1685 aa18.53■□□□□ 0.56
PPFIA4-212ENST00000600447 ZNF541Q9H0D2 1346 aa18.52■□□□□ 0.56
PPFIA4-212ENST00000600447 SF3B3Q15393 1217 aaKnown RBP18.52■□□□□ 0.56
PPFIA4-212ENST00000600447 TMC4Q7Z404 712 aa18.52■□□□□ 0.56
PPFIA4-212ENST00000600447 ZBTB38Q8NAP3 1195 aaPredicted RBP18.52■□□□□ 0.56
PPFIA4-212ENST00000600447 VPS33BQ9H267 617 aa18.52■□□□□ 0.56
PPFIA4-212ENST00000600447 IQCA1LA6NCM1 817 aa18.51■□□□□ 0.55
PPFIA4-212ENST00000600447 IRS4O14654 1257 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms