RNA–Protein interactions for RNA: ENST00000600229.5

CRB3-204, Transcript of crumbs 3, cell polarity complex component, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CRB3, Length 1,078 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRB3-204ENST00000600229 NLRP10Q86W26 655 aa22.08■■□□□ 1.13
CRB3-204ENST00000600229 MASTLQ96GX5 879 aa22.08■■□□□ 1.13
CRB3-204ENST00000600229 RNF123Q5XPI4 1314 aa22.07■■□□□ 1.12
CRB3-204ENST00000600229 DDX60Q8IY21 1712 aaKnown RBP22.07■■□□□ 1.12
CRB3-204ENST00000600229 NPR1P16066 1061 aa22.06■■□□□ 1.12
CRB3-204ENST00000600229 GOLGA2Q08379 1002 aa22.06■■□□□ 1.12
CRB3-204ENST00000600229 PRPF40BQ6NWY9 871 aaKnown RBP22.06■■□□□ 1.12
CRB3-204ENST00000600229 CNKSR1Q969H4 720 aa22.06■■□□□ 1.12
CRB3-204ENST00000600229 UTP14AQ9BVJ6 771 aaKnown RBP22.06■■□□□ 1.12
CRB3-204ENST00000600229 MYH16Q9H6N6 1097 aa22.06■■□□□ 1.12
CRB3-204ENST00000600229 EXOSC9Q06265 439 aaKnown RBP22.05■■□□□ 1.12
CRB3-204ENST00000600229 ISCA1Q9BUE6 129 aa22.05■■□□□ 1.12
CRB3-204ENST00000600229 STK31Q9BXU1 1019 aa22.04■■□□□ 1.12
CRB3-204ENST00000600229 TIAM2Q8IVF5 1701 aa22.03■■□□□ 1.12
CRB3-204ENST00000600229 CCDC88AQ3V6T2 1871 aa22.03■■□□□ 1.12
CRB3-204ENST00000600229 VAMP4O75379 141 aa22.03■■□□□ 1.12
CRB3-204ENST00000600229 RASSF7Q02833 373 aa22.03■■□□□ 1.12
CRB3-204ENST00000600229 MIER1Q8N108 512 aa22.03■■□□□ 1.12
CRB3-204ENST00000600229 NFKBIEO00221 500 aa22.02■■□□□ 1.12
CRB3-204ENST00000600229 TCERG1O14776 1098 aaKnown RBP22.02■■□□□ 1.12
CRB3-204ENST00000600229 C3orf67Q6ZVT6 689 aa22.02■■□□□ 1.12
CRB3-204ENST00000600229 RIC3Q7Z5B4 369 aa22.02■■□□□ 1.12
CRB3-204ENST00000600229 ATP5J2-PTCD1G3V325 749 aa22.01■■□□□ 1.11
CRB3-204ENST00000600229 C21orf2O43822 256 aa22.01■■□□□ 1.11
CRB3-204ENST00000600229 TRIM28Q13263 835 aaKnown RBP22.01■■□□□ 1.11
CRB3-204ENST00000600229 SLC10A5Q5PT55 438 aa22.01■■□□□ 1.11
CRB3-204ENST00000600229 SH3TC1Q8TE82 1336 aa22.01■■□□□ 1.11
CRB3-204ENST00000600229 DICER1Q9UPY3 1922 aaKnown RBP22■■□□□ 1.11
CRB3-204ENST00000600229 DDX58O95786 925 aaKnown RBP22■■□□□ 1.11
CRB3-204ENST00000600229 C7orf43Q8WVR3 580 aa22■■□□□ 1.11
CRB3-204ENST00000600229 TRMT112Q9UI30 125 aaKnown RBP22■■□□□ 1.11
CRB3-204ENST00000600229 SNED1Q8TER0 1413 aa21.99■■□□□ 1.11
CRB3-204ENST00000600229 HOXA10P31260 410 aaPredicted RBP21.99■■□□□ 1.11
CRB3-204ENST00000600229 PRELPP51888 382 aa21.99■■□□□ 1.11
CRB3-204ENST00000600229 C9orf131Q5VYM1 1079 aa21.99■■□□□ 1.11
CRB3-204ENST00000600229 G2E3Q7L622 706 aa21.99■■□□□ 1.11
CRB3-204ENST00000600229 SYNE4Q8N205 404 aa21.99■■□□□ 1.11
CRB3-204ENST00000600229 SLC4A2P04920 1241 aa21.98■■□□□ 1.11
CRB3-204ENST00000600229 ZNF428Q96B54 188 aa21.98■■□□□ 1.11
CRB3-204ENST00000600229 MYD88Q99836 296 aa21.98■■□□□ 1.11
CRB3-204ENST00000600229 METTL22Q9BUU2 404 aaPredicted RBP21.98■■□□□ 1.11
CRB3-204ENST00000600229 ZNF219Q9P2Y4 722 aaPredicted RBP21.98■■□□□ 1.11
CRB3-204ENST00000600229 LTBP3Q9NS15 1303 aa21.98■■□□□ 1.11
CRB3-204ENST00000600229 PI4KAP2A4QPH2 592 aa21.97■■□□□ 1.11
CRB3-204ENST00000600229 E9PSI1 815 aa21.97■■□□□ 1.11
CRB3-204ENST00000600229 ALDH1B1P30837 517 aa21.97■■□□□ 1.11
CRB3-204ENST00000600229 FLIIQ13045 1269 aa21.97■■□□□ 1.11
CRB3-204ENST00000600229 SOGA3Q5TF21 947 aa21.97■■□□□ 1.11
CRB3-204ENST00000600229 KSR2Q6VAB6 950 aa21.97■■□□□ 1.11
CRB3-204ENST00000600229 PI4KAP1Q8N8J0 262 aa21.97■■□□□ 1.11
CRB3-204ENST00000600229 RPGRQ92834 1020 aaKnown RBP21.97■■□□□ 1.11
CRB3-204ENST00000600229 NLRP3Q96P20 1036 aa21.97■■□□□ 1.11
CRB3-204ENST00000600229 RNF181Q9P0P0 153 aa21.97■■□□□ 1.11
CRB3-204ENST00000600229 MAP3K2Q9Y2U5 619 aa21.97■■□□□ 1.11
CRB3-204ENST00000600229 HCLS1P14317 486 aaPredicted RBP21.96■■□□□ 1.11
CRB3-204ENST00000600229 LMNB1P20700 586 aa21.95■■□□□ 1.1
CRB3-204ENST00000600229 SLFN5Q08AF3 891 aa21.95■■□□□ 1.1
CRB3-204ENST00000600229 CCDC93Q567U6 631 aa21.95■■□□□ 1.1
CRB3-204ENST00000600229 FAM89AQ96GI7 184 aa21.95■■□□□ 1.1
CRB3-204ENST00000600229 CRAMP1Q96RY5 1269 aa21.95■■□□□ 1.1
CRB3-204ENST00000600229 TAF1P21675 1872 aa21.94■■□□□ 1.1
CRB3-204ENST00000600229 CCDC191Q8NCU4 936 aa21.94■■□□□ 1.1
CRB3-204ENST00000600229 TAOK3Q9H2K8 898 aa21.94■■□□□ 1.1
CRB3-204ENST00000600229 LRRC37AA6NMS7 1700 aa21.93■■□□□ 1.1
CRB3-204ENST00000600229 ABCC4O15439 1325 aa21.93■■□□□ 1.1
CRB3-204ENST00000600229 OLFM4Q6UX06 510 aa21.93■■□□□ 1.1
CRB3-204ENST00000600229 ZBTB38Q8NAP3 1195 aaPredicted RBP21.93■■□□□ 1.1
CRB3-204ENST00000600229 RBM17Q96I25 401 aaKnown RBP21.93■■□□□ 1.1
CRB3-204ENST00000600229 ZC3H4Q9UPT8 1303 aaKnown RBP21.93■■□□□ 1.1
CRB3-204ENST00000600229 COL4A1P02462 1669 aa21.92■■□□□ 1.1
CRB3-204ENST00000600229 IGKV5-2P06315 115 aa21.92■■□□□ 1.1
CRB3-204ENST00000600229 CDCA7LQ96GN5 454 aa21.92■■□□□ 1.1
CRB3-204ENST00000600229 CWC25Q9NXE8 425 aaPredicted RBP21.92■■□□□ 1.1
CRB3-204ENST00000600229 MYH3P11055 1940 aa21.92■■□□□ 1.1
CRB3-204ENST00000600229 FKBP5Q13451 457 aaPredicted RBP21.91■■□□□ 1.1
CRB3-204ENST00000600229 RTL5Q5HYW3 569 aaPredicted RBP21.91■■□□□ 1.1
CRB3-204ENST00000600229 SLC51AQ86UW1 340 aa21.91■■□□□ 1.1
CRB3-204ENST00000600229 ZNF526Q8TF50 670 aaPredicted RBP21.91■■□□□ 1.1
CRB3-204ENST00000600229 IRS4O14654 1257 aaPredicted RBP21.9■■□□□ 1.1
CRB3-204ENST00000600229 PPEF1O14829 653 aaPredicted RBP21.9■■□□□ 1.1
CRB3-204ENST00000600229 PCCAP05165 728 aaPredicted RBP21.9■■□□□ 1.1
CRB3-204ENST00000600229 TRMT2AQ8IZ69 625 aaKnown RBP21.9■■□□□ 1.1
CRB3-204ENST00000600229 GPBP1L1Q9HC44 474 aaPredicted RBP21.9■■□□□ 1.1
CRB3-204ENST00000600229 NEURL1BA8MQ27 555 aa21.89■■□□□ 1.09
CRB3-204ENST00000600229 NEXNQ0ZGT2 675 aa21.89■■□□□ 1.09
CRB3-204ENST00000600229 FKBP4Q02790 459 aaKnown RBP eCLIP21.88■■□□□ 1.09
CRB3-204ENST00000600229 SF3B3Q15393 1217 aaKnown RBP21.88■■□□□ 1.09
CRB3-204ENST00000600229 CWF19L2Q2TBE0 894 aaKnown RBP21.88■■□□□ 1.09
CRB3-204ENST00000600229 RTKN2Q8IZC4 609 aa21.88■■□□□ 1.09
CRB3-204ENST00000600229 DNAAF4Q8WXU2 420 aa21.88■■□□□ 1.09
CRB3-204ENST00000600229 CDHR2Q9BYE9 1310 aa21.87■■□□□ 1.09
CRB3-204ENST00000600229 GRAPQ13588 217 aa21.87■■□□□ 1.09
CRB3-204ENST00000600229 CC2D2BQ6DHV5 1058 aa21.87■■□□□ 1.09
CRB3-204ENST00000600229 GRAPLQ8TC17 118 aaPredicted RBP21.87■■□□□ 1.09
CRB3-204ENST00000600229 DDX46Q7L014 1031 aaKnown RBP21.86■■□□□ 1.09
CRB3-204ENST00000600229 PSMD1Q99460 953 aa21.86■■□□□ 1.09
CRB3-204ENST00000600229 ATP6V0A2Q9Y487 856 aa21.85■■□□□ 1.09
CRB3-204ENST00000600229 DUOX1Q9NRD9 1551 aa21.85■■□□□ 1.09
CRB3-204ENST00000600229 LTBP1Q14766 1721 aa21.85■■□□□ 1.09
CRB3-204ENST00000600229 COL4A5P29400 1685 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms