RNA–Protein interactions for RNA: ENST00000599227.5

ZNF544-213, Transcript of zinc finger protein 544, humanhuman

TSL 1 (best) BASIC

Gene ZNF544, Length 3,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-213ENST00000599227 CLEC17AQ6ZS10 378 aa13.36□□□□□ -0.27
ZNF544-213ENST00000599227 CCDC144CPQ8IYA2 1237 aa13.36□□□□□ -0.27
ZNF544-213ENST00000599227 TLR7Q9NYK1 1049 aaKnown RBP13.36□□□□□ -0.27
ZNF544-213ENST00000599227 KIF20BQ96Q89 1820 aa13.36□□□□□ -0.27
ZNF544-213ENST00000599227 TMEM2Q9UHN6 1383 aa13.36□□□□□ -0.27
ZNF544-213ENST00000599227 SSH3Q8TE77 659 aa13.36□□□□□ -0.27
ZNF544-213ENST00000599227 RUFY2Q8WXA3 655 aa13.36□□□□□ -0.27
ZNF544-213ENST00000599227 DLG5Q8TDM6 1919 aa13.36□□□□□ -0.27
ZNF544-213ENST00000599227 BICC1Q9H694 974 aaKnown RBP13.35□□□□□ -0.27
ZNF544-213ENST00000599227 RBM8AQ9Y5S9 174 aaKnown RBP13.35□□□□□ -0.27
ZNF544-213ENST00000599227 KIF24Q5T7B8 1368 aa13.35□□□□□ -0.27
ZNF544-213ENST00000599227 GLRX3O76003 335 aaKnown RBP13.35□□□□□ -0.27
ZNF544-213ENST00000599227 F13A1P00488 732 aa13.35□□□□□ -0.27
ZNF544-213ENST00000599227 CUL4AQ13619 759 aa13.35□□□□□ -0.27
ZNF544-213ENST00000599227 PI4K2BQ8TCG2 481 aa13.35□□□□□ -0.27
ZNF544-213ENST00000599227 MAP3K5Q99683 1374 aa13.35□□□□□ -0.27
ZNF544-213ENST00000599227 GOLIM4O00461 696 aa13.35□□□□□ -0.27
ZNF544-213ENST00000599227 ZRSR1Q15695 479 aaKnown RBP13.35□□□□□ -0.27
ZNF544-213ENST00000599227 CCDC183Q5T5S1 534 aa13.35□□□□□ -0.27
ZNF544-213ENST00000599227 SEC62Q99442 399 aaKnown RBP13.35□□□□□ -0.27
ZNF544-213ENST00000599227 SBNO1A3KN83 1393 aa13.34□□□□□ -0.27
ZNF544-213ENST00000599227 IGSF1Q8N6C5 1336 aa13.34□□□□□ -0.27
ZNF544-213ENST00000599227 NMIQ13287 307 aaPredicted RBP13.34□□□□□ -0.27
ZNF544-213ENST00000599227 ISM2Q6H9L7 571 aa13.34□□□□□ -0.27
ZNF544-213ENST00000599227 ZNF496Q96IT1 587 aaPredicted RBP13.34□□□□□ -0.27
ZNF544-213ENST00000599227 ECHDC1Q9NTX5 307 aa13.34□□□□□ -0.27
ZNF544-213ENST00000599227 JAG2Q9Y219 1238 aa13.34□□□□□ -0.27
ZNF544-213ENST00000599227 A0A087WWV3 80 aa13.34□□□□□ -0.27
ZNF544-213ENST00000599227 ANAPC15P60006 121 aa13.34□□□□□ -0.27
ZNF544-213ENST00000599227 EIF4A1P60842 406 aaKnown RBP13.34□□□□□ -0.27
ZNF544-213ENST00000599227 ZNF592Q92610 1267 aa13.34□□□□□ -0.27
ZNF544-213ENST00000599227 LSG1Q9H089 658 aaKnown RBP13.34□□□□□ -0.27
ZNF544-213ENST00000599227 TAF6LQ9Y6J9 622 aa13.34□□□□□ -0.27
ZNF544-213ENST00000599227 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.34□□□□□ -0.27
ZNF544-213ENST00000599227 RAD50Q92878 1312 aa13.34□□□□□ -0.27
ZNF544-213ENST00000599227 ME3Q16798 604 aa13.33□□□□□ -0.27
ZNF544-213ENST00000599227 LMBR1LQ6UX01 489 aa13.33□□□□□ -0.27
ZNF544-213ENST00000599227 DBF4Q9UBU7 674 aaPredicted RBP13.33□□□□□ -0.27
ZNF544-213ENST00000599227 ERCC4Q92889 916 aaPredicted RBP13.33□□□□□ -0.28
ZNF544-213ENST00000599227 RIMS1Q86UR5 1692 aaKnown RBP13.33□□□□□ -0.28
ZNF544-213ENST00000599227 INTS4Q96HW7 963 aaKnown RBP13.33□□□□□ -0.28
ZNF544-213ENST00000599227 CLTCQ00610 1675 aaKnown RBP13.33□□□□□ -0.28
ZNF544-213ENST00000599227 BEND3Q5T5X7 828 aa13.32□□□□□ -0.28
ZNF544-213ENST00000599227 SMIM5Q71RC9 77 aa13.32□□□□□ -0.28
ZNF544-213ENST00000599227 TBC1D2BQ9UPU7 963 aa13.32□□□□□ -0.28
ZNF544-213ENST00000599227 ATP6V1DQ9Y5K8 247 aa13.32□□□□□ -0.28
ZNF544-213ENST00000599227 CDC37L1Q7L3B6 337 aa13.32□□□□□ -0.28
ZNF544-213ENST00000599227 LUZP1Q86V48 1076 aa13.32□□□□□ -0.28
ZNF544-213ENST00000599227 RXRAP19793 462 aa13.32□□□□□ -0.28
ZNF544-213ENST00000599227 CSPP1Q1MSJ5 1256 aa13.32□□□□□ -0.28
ZNF544-213ENST00000599227 BLOC1S2Q6QNY1 142 aa13.32□□□□□ -0.28
ZNF544-213ENST00000599227 SUCLG2Q96I99 432 aa13.32□□□□□ -0.28
ZNF544-213ENST00000599227 PDLIM2Q96JY6 352 aa13.32□□□□□ -0.28
ZNF544-213ENST00000599227 STAP2Q9UGK3 403 aa13.32□□□□□ -0.28
ZNF544-213ENST00000599227 CEP170BQ9Y4F5 1589 aaPredicted RBP13.32□□□□□ -0.28
ZNF544-213ENST00000599227 SF3A1Q15459 793 aaKnown RBP13.31□□□□□ -0.28
ZNF544-213ENST00000599227 HSP90AB4PQ58FF6 505 aa13.31□□□□□ -0.28
ZNF544-213ENST00000599227 EAF2Q96CJ1 260 aaPredicted RBP13.31□□□□□ -0.28
ZNF544-213ENST00000599227 PDCL3Q9H2J4 239 aa13.31□□□□□ -0.28
ZNF544-213ENST00000599227 IDH1O75874 414 aaKnown RBP13.31□□□□□ -0.28
ZNF544-213ENST00000599227 UBE2HP62256 183 aa13.31□□□□□ -0.28
ZNF544-213ENST00000599227 WWC3Q9ULE0 1092 aa13.31□□□□□ -0.28
ZNF544-213ENST00000599227 TTC21AQ8NDW8 1320 aa13.31□□□□□ -0.28
ZNF544-213ENST00000599227 SALL3Q9BXA9 1300 aa13.31□□□□□ -0.28
ZNF544-213ENST00000599227 A0A0D9SFI3 127 aa13.31□□□□□ -0.28
ZNF544-213ENST00000599227 NOLC1Q14978 699 aaKnown RBP eCLIP13.31□□□□□ -0.28
ZNF544-213ENST00000599227 FAM182BQ5T319 152 aa13.31□□□□□ -0.28
ZNF544-213ENST00000599227 FAM89AQ96GI7 184 aa13.31□□□□□ -0.28
ZNF544-213ENST00000599227 TRIM5Q9C035 493 aa13.31□□□□□ -0.28
ZNF544-213ENST00000599227 TPCN1Q9ULQ1 816 aa13.31□□□□□ -0.28
ZNF544-213ENST00000599227 ARHGEF10O15013 1369 aa13.3□□□□□ -0.28
ZNF544-213ENST00000599227 SNAP23O00161 211 aa13.3□□□□□ -0.28
ZNF544-213ENST00000599227 CREB3L3Q68CJ9 461 aa13.3□□□□□ -0.28
ZNF544-213ENST00000599227 ANKRD13DQ6ZTN6 518 aa13.3□□□□□ -0.28
ZNF544-213ENST00000599227 JAK2O60674 1132 aa13.3□□□□□ -0.28
ZNF544-213ENST00000599227 LIG1P18858 919 aa13.3□□□□□ -0.28
ZNF544-213ENST00000599227 DLC1Q96QB1 1528 aa13.3□□□□□ -0.28
ZNF544-213ENST00000599227 IGSF3O75054 1194 aa13.3□□□□□ -0.28
ZNF544-213ENST00000599227 CBX1P83916 185 aa13.3□□□□□ -0.28
ZNF544-213ENST00000599227 HYPKQ9NX55 129 aa13.3□□□□□ -0.28
ZNF544-213ENST00000599227 DACT1Q9NYF0 836 aa13.3□□□□□ -0.28
ZNF544-213ENST00000599227 RNMTO43148 476 aaKnown RBP13.29□□□□□ -0.28
ZNF544-213ENST00000599227 RAD21O60216 631 aa13.29□□□□□ -0.28
ZNF544-213ENST00000599227 TFCP2Q12800 502 aa13.29□□□□□ -0.28
ZNF544-213ENST00000599227 SYNE4Q8N205 404 aa13.29□□□□□ -0.28
ZNF544-213ENST00000599227 SPATA32Q96LK8 384 aa13.29□□□□□ -0.28
ZNF544-213ENST00000599227 SPDYE4A6NLX3 237 aa13.29□□□□□ -0.28
ZNF544-213ENST00000599227 HSP90AA4PQ58FG1 418 aa13.29□□□□□ -0.28
ZNF544-213ENST00000599227 LARP1Q6PKG0 1096 aaKnown RBP13.29□□□□□ -0.28
ZNF544-213ENST00000599227 SASS6Q6UVJ0 657 aa13.29□□□□□ -0.28
ZNF544-213ENST00000599227 TNMDQ9H2S6 317 aa13.29□□□□□ -0.28
ZNF544-213ENST00000599227 CNNM1Q9NRU3 951 aa13.29□□□□□ -0.28
ZNF544-213ENST00000599227 MTMR6Q9Y217 621 aa13.29□□□□□ -0.28
ZNF544-213ENST00000599227 GOLGB1Q14789 3259 aaKnown RBP13.29□□□□□ -0.28
ZNF544-213ENST00000599227 TCHHQ07283 1943 aa13.29□□□□□ -0.28
ZNF544-213ENST00000599227 KRT85P78386 507 aa13.29□□□□□ -0.28
ZNF544-213ENST00000599227 OVOS2A0A0J9YW53 1432 aa13.28□□□□□ -0.28
ZNF544-213ENST00000599227 OVOS2Q6IE36 1432 aa13.28□□□□□ -0.28
ZNF544-213ENST00000599227 CDC42BPGQ6DT37 1551 aa13.28□□□□□ -0.28
ZNF544-213ENST00000599227 OTUD7BQ6GQQ9 843 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms