RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 SRGAP3O43295 1099 aa18.4■□□□□ 0.54
IRF3-219ENST00000597636 CDC37L1Q7L3B6 337 aa18.4■□□□□ 0.54
IRF3-219ENST00000597636 NPHP4O75161 1426 aaPredicted RBP18.4■□□□□ 0.54
IRF3-219ENST00000597636 USP42Q9H9J4 1324 aaKnown RBP18.4■□□□□ 0.54
IRF3-219ENST00000597636 GLRX3O76003 335 aaKnown RBP18.4■□□□□ 0.54
IRF3-219ENST00000597636 TPD52L1Q16890 204 aaPredicted RBP18.4■□□□□ 0.54
IRF3-219ENST00000597636 CACTINQ8WUQ7 758 aaKnown RBP18.4■□□□□ 0.54
IRF3-219ENST00000597636 SCAND2PQ9GZW5 306 aaPredicted RBP18.4■□□□□ 0.54
IRF3-219ENST00000597636 PEAK1Q9H792 1746 aa18.4■□□□□ 0.54
IRF3-219ENST00000597636 PDCP20941 246 aa18.39■□□□□ 0.53
IRF3-219ENST00000597636 LMOD2Q6P5Q4 547 aa18.39■□□□□ 0.53
IRF3-219ENST00000597636 TPCN1Q9ULQ1 816 aa18.39■□□□□ 0.53
IRF3-219ENST00000597636 ITSN1Q15811 1721 aa18.39■□□□□ 0.53
IRF3-219ENST00000597636 GOLGA6L4A6NEF3 574 aa18.39■□□□□ 0.53
IRF3-219ENST00000597636 HTATSF1O43719 755 aaKnown RBP18.39■□□□□ 0.53
IRF3-219ENST00000597636 CLSTN2Q9H4D0 955 aa18.39■□□□□ 0.53
IRF3-219ENST00000597636 TTC41PQ6P2S7 1318 aa18.38■□□□□ 0.53
IRF3-219ENST00000597636 NPHP3Q7Z494 1330 aa18.38■□□□□ 0.53
IRF3-219ENST00000597636 NECTIN1Q15223 517 aa18.38■□□□□ 0.53
IRF3-219ENST00000597636 KIF18AQ8NI77 898 aa18.38■□□□□ 0.53
IRF3-219ENST00000597636 SLFN14P0C7P3 912 aa18.38■□□□□ 0.53
IRF3-219ENST00000597636 ZNF165P49910 485 aa18.38■□□□□ 0.53
IRF3-219ENST00000597636 ORAI2Q96SN7 254 aa18.38■□□□□ 0.53
IRF3-219ENST00000597636 CLIP2Q9UDT6 1046 aa18.38■□□□□ 0.53
IRF3-219ENST00000597636 KDRP35968 1356 aa18.38■□□□□ 0.53
IRF3-219ENST00000597636 FAM208AQ9UK61 1670 aaKnown RBP18.37■□□□□ 0.53
IRF3-219ENST00000597636 USP31Q70CQ4 1352 aa18.37■□□□□ 0.53
IRF3-219ENST00000597636 ZKSCAN1P17029 563 aaPredicted RBP18.37■□□□□ 0.53
IRF3-219ENST00000597636 RGPD8O14715 1765 aaPredicted RBP18.37■□□□□ 0.53
IRF3-219ENST00000597636 HSP90AB4PQ58FF6 505 aa18.37■□□□□ 0.53
IRF3-219ENST00000597636 CEP135Q66GS9 1140 aa18.37■□□□□ 0.53
IRF3-219ENST00000597636 DDX54Q8TDD1 881 aaKnown RBP18.37■□□□□ 0.53
IRF3-219ENST00000597636 SPATA32Q96LK8 384 aa18.37■□□□□ 0.53
IRF3-219ENST00000597636 CDC25BP30305 580 aa18.36■□□□□ 0.53
IRF3-219ENST00000597636 CCDC144BQ3MJ40 725 aa18.36■□□□□ 0.53
IRF3-219ENST00000597636 CCDC144CPQ8IYA2 1237 aa18.36■□□□□ 0.53
IRF3-219ENST00000597636 LEO1Q8WVC0 666 aaPredicted RBP18.36■□□□□ 0.53
IRF3-219ENST00000597636 TFIP11Q9UBB9 837 aaKnown RBP18.36■□□□□ 0.53
IRF3-219ENST00000597636 DDX17Q92841 729 aaKnown RBP18.36■□□□□ 0.53
IRF3-219ENST00000597636 DNAJC25Q9H1X3 360 aa18.35■□□□□ 0.53
IRF3-219ENST00000597636 PHAXQ9H814 394 aaKnown RBP18.35■□□□□ 0.53
IRF3-219ENST00000597636 CRYBG1Q9Y4K1 1723 aa18.35■□□□□ 0.53
IRF3-219ENST00000597636 EYA1Q99502 592 aa18.35■□□□□ 0.53
IRF3-219ENST00000597636 N4BP2Q86UW6 1770 aaPredicted RBP18.34■□□□□ 0.53
IRF3-219ENST00000597636 GNAT3A8MTJ3 354 aa18.34■□□□□ 0.53
IRF3-219ENST00000597636 CAVIN2O95810 425 aa18.34■□□□□ 0.53
IRF3-219ENST00000597636 NBPF7P0C2Y1 421 aaPredicted RBP18.34■□□□□ 0.53
IRF3-219ENST00000597636 CREB3L3Q68CJ9 461 aa18.34■□□□□ 0.53
IRF3-219ENST00000597636 ZNF592Q92610 1267 aa18.34■□□□□ 0.53
IRF3-219ENST00000597636 NR1I2O75469 434 aa18.34■□□□□ 0.53
IRF3-219ENST00000597636 ZNF397Q8NF99 534 aaPredicted RBP18.34■□□□□ 0.53
IRF3-219ENST00000597636 RBM8AQ9Y5S9 174 aaKnown RBP18.34■□□□□ 0.53
IRF3-219ENST00000597636 NLRP6P59044 892 aa18.33■□□□□ 0.53
IRF3-219ENST00000597636 TERF2Q15554 542 aa18.33■□□□□ 0.53
IRF3-219ENST00000597636 HDGFL1Q5TGJ6 251 aa18.33■□□□□ 0.53
IRF3-219ENST00000597636 LRRC8AQ8IWT6 810 aa18.33■□□□□ 0.53
IRF3-219ENST00000597636 KRT222Q8N1A0 295 aa18.33■□□□□ 0.53
IRF3-219ENST00000597636 IGSF1Q8N6C5 1336 aa18.33■□□□□ 0.53
IRF3-219ENST00000597636 PLEKHG3A1L390 1219 aa18.33■□□□□ 0.52
IRF3-219ENST00000597636 RBM6P78332 1123 aaKnown RBP18.33■□□□□ 0.52
IRF3-219ENST00000597636 ECHDC1Q9NTX5 307 aa18.33■□□□□ 0.52
IRF3-219ENST00000597636 PSMA5P28066 241 aa18.32■□□□□ 0.52
IRF3-219ENST00000597636 CLASRPQ8N2M8 674 aaKnown RBP18.32■□□□□ 0.52
IRF3-219ENST00000597636 ADGRL3Q9HAR2 1447 aa18.32■□□□□ 0.52
IRF3-219ENST00000597636 CACNA1FO60840 1977 aa18.32■□□□□ 0.52
IRF3-219ENST00000597636 NEMFO60524 1076 aa18.32■□□□□ 0.52
IRF3-219ENST00000597636 FGD1P98174 961 aa18.32■□□□□ 0.52
IRF3-219ENST00000597636 OS9Q13438 667 aaPredicted RBP18.32■□□□□ 0.52
IRF3-219ENST00000597636 KMT5BQ4FZB7 885 aa18.32■□□□□ 0.52
IRF3-219ENST00000597636 LARP1Q6PKG0 1096 aaKnown RBP18.32■□□□□ 0.52
IRF3-219ENST00000597636 ABTB2Q8N961 1025 aa18.32■□□□□ 0.52
IRF3-219ENST00000597636 MAP4K1Q92918 833 aa18.32■□□□□ 0.52
IRF3-219ENST00000597636 PGBD1Q96JS3 809 aa18.32■□□□□ 0.52
IRF3-219ENST00000597636 USP6P35125 1406 aa18.32■□□□□ 0.52
IRF3-219ENST00000597636 KCNJ4P48050 445 aa18.32■□□□□ 0.52
IRF3-219ENST00000597636 TAF7Q15545 349 aaPredicted RBP18.32■□□□□ 0.52
IRF3-219ENST00000597636 SARM1Q6SZW1 724 aa18.32■□□□□ 0.52
IRF3-219ENST00000597636 BICD2Q8TD16 824 aa18.32■□□□□ 0.52
IRF3-219ENST00000597636 BABAM1Q9NWV8 329 aa18.32■□□□□ 0.52
IRF3-219ENST00000597636 ZNF215Q9UL58 517 aaPredicted RBP18.32■□□□□ 0.52
IRF3-219ENST00000597636 FLT4P35916 1363 aa18.31■□□□□ 0.52
IRF3-219ENST00000597636 ANKRD1Q15327 319 aa18.31■□□□□ 0.52
IRF3-219ENST00000597636 NYAP1Q6ZVC0 841 aa18.31■□□□□ 0.52
IRF3-219ENST00000597636 IL17REQ8NFR9 667 aa18.31■□□□□ 0.52
IRF3-219ENST00000597636 EVI5LQ96CN4 794 aa18.31■□□□□ 0.52
IRF3-219ENST00000597636 SBNO1A3KN83 1393 aa18.31■□□□□ 0.52
IRF3-219ENST00000597636 COL9A3Q14050 684 aaPredicted RBP18.31■□□□□ 0.52
IRF3-219ENST00000597636 PTPN14Q15678 1187 aa18.31■□□□□ 0.52
IRF3-219ENST00000597636 MRFAP1L1Q96HT8 127 aa18.31■□□□□ 0.52
IRF3-219ENST00000597636 FAM53CQ9NYF3 392 aa18.31■□□□□ 0.52
IRF3-219ENST00000597636 PHF8Q9UPP1 1060 aa18.31■□□□□ 0.52
IRF3-219ENST00000597636 NALCNQ8IZF0 1738 aa18.3■□□□□ 0.52
IRF3-219ENST00000597636 USP27XA6NNY8 438 aa18.3■□□□□ 0.52
IRF3-219ENST00000597636 PSME1Q06323 249 aa18.3■□□□□ 0.52
IRF3-219ENST00000597636 IQCB1Q15051 598 aa18.3■□□□□ 0.52
IRF3-219ENST00000597636 GOLGA6L19H0YKK7 550 aa18.3■□□□□ 0.52
IRF3-219ENST00000597636 SLC27A2O14975 620 aa18.3■□□□□ 0.52
IRF3-219ENST00000597636 LRRC37A3O60309 1634 aa18.3■□□□□ 0.52
IRF3-219ENST00000597636 DIP2AQ14689 1571 aa18.3■□□□□ 0.52
IRF3-219ENST00000597636 ARID5BQ14865 1188 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms