RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 FZD9O00144 591 aa13.9□□□□□ -0.18
CHMP2A-202ENST00000596708 EIF6P56537 245 aaKnown RBP13.9□□□□□ -0.18
CHMP2A-202ENST00000596708 RIPK4P57078 832 aa13.9□□□□□ -0.18
CHMP2A-202ENST00000596708 GIGYF2Q6Y7W6 1299 aaKnown RBP13.9□□□□□ -0.18
CHMP2A-202ENST00000596708 PPP1R42Q7Z4L9 355 aa13.9□□□□□ -0.18
CHMP2A-202ENST00000596708 PSMD1Q99460 953 aa13.9□□□□□ -0.18
CHMP2A-202ENST00000596708 GJA3Q9Y6H8 435 aa13.9□□□□□ -0.18
CHMP2A-202ENST00000596708 ANKRD36CQ5JPF3 1778 aa13.9□□□□□ -0.18
CHMP2A-202ENST00000596708 TRPM7Q96QT4 1865 aa13.9□□□□□ -0.18
CHMP2A-202ENST00000596708 PCNTO95613 3336 aa13.9□□□□□ -0.18
CHMP2A-202ENST00000596708 UBN2Q6ZU65 1347 aa13.9□□□□□ -0.19
CHMP2A-202ENST00000596708 PASKQ96RG2 1323 aa13.9□□□□□ -0.19
CHMP2A-202ENST00000596708 TMEM88BA6NKF7 163 aa13.89□□□□□ -0.19
CHMP2A-202ENST00000596708 PNMA8AQ86V59 439 aaPredicted RBP13.89□□□□□ -0.19
CHMP2A-202ENST00000596708 ZNF34Q8IZ26 560 aa13.89□□□□□ -0.19
CHMP2A-202ENST00000596708 GPC2Q8N158 579 aa13.89□□□□□ -0.19
CHMP2A-202ENST00000596708 TAF1P21675 1872 aa13.89□□□□□ -0.19
CHMP2A-202ENST00000596708 ERBB4Q15303 1308 aa13.89□□□□□ -0.19
CHMP2A-202ENST00000596708 LAMB2P55268 1798 aa13.88□□□□□ -0.19
CHMP2A-202ENST00000596708 ADAMTSL1Q8N6G6 1762 aa13.88□□□□□ -0.19
CHMP2A-202ENST00000596708 ITGBL1O95965 494 aaPredicted RBP13.88□□□□□ -0.19
CHMP2A-202ENST00000596708 HOXA10P31260 410 aaPredicted RBP13.88□□□□□ -0.19
CHMP2A-202ENST00000596708 GRIPAP1Q4V328 841 aa13.88□□□□□ -0.19
CHMP2A-202ENST00000596708 PARP10Q53GL7 1025 aa13.88□□□□□ -0.19
CHMP2A-202ENST00000596708 LARGE2Q8N3Y3 721 aa13.88□□□□□ -0.19
CHMP2A-202ENST00000596708 NLRP3Q96P20 1036 aa13.88□□□□□ -0.19
CHMP2A-202ENST00000596708 CRAMP1Q96RY5 1269 aa13.88□□□□□ -0.19
CHMP2A-202ENST00000596708 TMX4Q9H1E5 349 aaPredicted RBP13.88□□□□□ -0.19
CHMP2A-202ENST00000596708 CNTNAP1P78357 1384 aa13.87□□□□□ -0.19
CHMP2A-202ENST00000596708 IBTKQ9P2D0 1353 aaPredicted RBP13.87□□□□□ -0.19
CHMP2A-202ENST00000596708 PPEF1O14829 653 aaPredicted RBP13.87□□□□□ -0.19
CHMP2A-202ENST00000596708 NTSR2O95665 410 aa13.87□□□□□ -0.19
CHMP2A-202ENST00000596708 LMOD1P29536 600 aaPredicted RBP13.87□□□□□ -0.19
CHMP2A-202ENST00000596708 MAP1SQ66K74 1059 aaPredicted RBP13.87□□□□□ -0.19
CHMP2A-202ENST00000596708 CNTROBQ8N137 903 aa13.87□□□□□ -0.19
CHMP2A-202ENST00000596708 ANXA1P04083 346 aa13.86□□□□□ -0.19
CHMP2A-202ENST00000596708 AIMP1Q12904 312 aaKnown RBP13.86□□□□□ -0.19
CHMP2A-202ENST00000596708 NECTIN2Q92692 538 aa13.86□□□□□ -0.19
CHMP2A-202ENST00000596708 UTP14AQ9BVJ6 771 aaKnown RBP13.86□□□□□ -0.19
CHMP2A-202ENST00000596708 RIC1Q4ADV7 1423 aa13.86□□□□□ -0.19
CHMP2A-202ENST00000596708 SNED1Q8TER0 1413 aa13.86□□□□□ -0.19
CHMP2A-202ENST00000596708 LTBP1Q14766 1721 aa13.85□□□□□ -0.19
CHMP2A-202ENST00000596708 VEGFBP49765 207 aa13.85□□□□□ -0.19
CHMP2A-202ENST00000596708 LMOD3Q0VAK6 560 aa13.85□□□□□ -0.19
CHMP2A-202ENST00000596708 PDIA6Q15084 440 aa13.85□□□□□ -0.19
CHMP2A-202ENST00000596708 RALBP1Q15311 655 aa13.85□□□□□ -0.19
CHMP2A-202ENST00000596708 NEUROD2Q15784 382 aa13.85□□□□□ -0.19
CHMP2A-202ENST00000596708 C3orf67Q6ZVT6 689 aa13.85□□□□□ -0.19
CHMP2A-202ENST00000596708 NIM1KQ8IY84 436 aa13.85□□□□□ -0.19
CHMP2A-202ENST00000596708 AIDAQ96BJ3 306 aa13.85□□□□□ -0.19
CHMP2A-202ENST00000596708 COL4A5P29400 1685 aa13.85□□□□□ -0.19
CHMP2A-202ENST00000596708 POLR2AP24928 1970 aaKnown RBP13.84□□□□□ -0.19
CHMP2A-202ENST00000596708 FOXN1O15353 648 aa13.84□□□□□ -0.19
CHMP2A-202ENST00000596708 PPIP5K2O43314 1243 aa13.84□□□□□ -0.19
CHMP2A-202ENST00000596708 TMPOP42166 694 aaKnown RBP13.84□□□□□ -0.19
CHMP2A-202ENST00000596708 PROSER3Q2NL68 480 aa13.84□□□□□ -0.19
CHMP2A-202ENST00000596708 DEFB115Q30KQ5 88 aa13.84□□□□□ -0.19
CHMP2A-202ENST00000596708 SLC51AQ86UW1 340 aa13.84□□□□□ -0.19
CHMP2A-202ENST00000596708 BABAM1Q9NWV8 329 aa13.84□□□□□ -0.19
CHMP2A-202ENST00000596708 EPS15P42566 896 aa13.83□□□□□ -0.2
CHMP2A-202ENST00000596708 HSP90AB3PQ58FF7 597 aa13.83□□□□□ -0.2
CHMP2A-202ENST00000596708 SLC10A5Q5PT55 438 aa13.83□□□□□ -0.2
CHMP2A-202ENST00000596708 COPS6Q7L5N1 327 aa13.83□□□□□ -0.2
CHMP2A-202ENST00000596708 LRP10Q7Z4F1 713 aa13.83□□□□□ -0.2
CHMP2A-202ENST00000596708 ABT1Q9ULW3 272 aaKnown RBP13.83□□□□□ -0.2
CHMP2A-202ENST00000596708 LAS1LQ9Y4W2 734 aaKnown RBP13.83□□□□□ -0.2
CHMP2A-202ENST00000596708 AOC3Q16853 763 aa13.82□□□□□ -0.2
CHMP2A-202ENST00000596708 CCDC146Q8IYE0 955 aa13.82□□□□□ -0.2
CHMP2A-202ENST00000596708 SUPT20HQ8NEM7 779 aa13.82□□□□□ -0.2
CHMP2A-202ENST00000596708 XAGE3Q8WTP9 111 aa13.82□□□□□ -0.2
CHMP2A-202ENST00000596708 ATP6V0A2Q9Y487 856 aa13.82□□□□□ -0.2
CHMP2A-202ENST00000596708 ABCC4O15439 1325 aa13.82□□□□□ -0.2
CHMP2A-202ENST00000596708 HCLS1P14317 486 aaPredicted RBP13.81□□□□□ -0.2
CHMP2A-202ENST00000596708 CTCFP49711 727 aaPredicted RBP13.81□□□□□ -0.2
CHMP2A-202ENST00000596708 SCNN1DP51172 638 aa13.81□□□□□ -0.2
CHMP2A-202ENST00000596708 VPS33BQ9H267 617 aa13.81□□□□□ -0.2
CHMP2A-202ENST00000596708 DDX21Q9NR30 783 aaKnown RBP eCLIP13.81□□□□□ -0.2
CHMP2A-202ENST00000596708 TRMT112Q9UI30 125 aaKnown RBP13.81□□□□□ -0.2
CHMP2A-202ENST00000596708 RASSF10A6NK89 507 aa13.8□□□□□ -0.2
CHMP2A-202ENST00000596708 BBOX1O75936 387 aa13.8□□□□□ -0.2
CHMP2A-202ENST00000596708 DDX10Q13206 875 aaKnown RBP13.8□□□□□ -0.2
CHMP2A-202ENST00000596708 TCIRG1Q13488 830 aa13.8□□□□□ -0.2
CHMP2A-202ENST00000596708 DPP8Q6V1X1 898 aaPredicted RBP13.8□□□□□ -0.2
CHMP2A-202ENST00000596708 PAXIP1Q6ZW49 1069 aaPredicted RBP13.8□□□□□ -0.2
CHMP2A-202ENST00000596708 USP50Q70EL3 339 aaPredicted RBP13.8□□□□□ -0.2
CHMP2A-202ENST00000596708 DDX46Q7L014 1031 aaKnown RBP13.8□□□□□ -0.2
CHMP2A-202ENST00000596708 NLRP10Q86W26 655 aa13.8□□□□□ -0.2
CHMP2A-202ENST00000596708 SP8Q8IXZ3 490 aa13.8□□□□□ -0.2
CHMP2A-202ENST00000596708 MPNDQ8N594 471 aa13.8□□□□□ -0.2
CHMP2A-202ENST00000596708 PRDM10Q9NQV6 1147 aa13.8□□□□□ -0.2
CHMP2A-202ENST00000596708 WDR33Q9C0J8 1336 aaKnown RBP13.8□□□□□ -0.2
CHMP2A-202ENST00000596708 DDX60Q8IY21 1712 aaKnown RBP13.79□□□□□ -0.2
CHMP2A-202ENST00000596708 FMR1Q06787 632 aaKnown RBP eCLIP13.79□□□□□ -0.2
CHMP2A-202ENST00000596708 WDR43Q15061 677 aaKnown RBP eCLIP13.79□□□□□ -0.2
CHMP2A-202ENST00000596708 KRT24Q2M2I5 525 aa13.79□□□□□ -0.2
CHMP2A-202ENST00000596708 ZNF428Q96B54 188 aa13.79□□□□□ -0.2
CHMP2A-202ENST00000596708 WBP1LQ9NX94 342 aa13.79□□□□□ -0.2
CHMP2A-202ENST00000596708 ZNRF3Q9ULT6 936 aa13.79□□□□□ -0.2
CHMP2A-202ENST00000596708 SH3TC1Q8TE82 1336 aa13.79□□□□□ -0.2
CHMP2A-202ENST00000596708 CHL1O00533 1208 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms