RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 TSPOAP1O95153 1857 aa20.64■□□□□ 0.89
ARHGEF1-213ENST00000595897 PDIA4P13667 645 aaKnown RBP20.64■□□□□ 0.89
ARHGEF1-213ENST00000595897 BLOC1S2Q6QNY1 142 aa20.64■□□□□ 0.89
ARHGEF1-213ENST00000595897 CACNA1FO60840 1977 aa20.64■□□□□ 0.89
ARHGEF1-213ENST00000595897 NMIQ13287 307 aaPredicted RBP20.64■□□□□ 0.89
ARHGEF1-213ENST00000595897 ANO6Q4KMQ2 910 aa20.64■□□□□ 0.89
ARHGEF1-213ENST00000595897 TRIM5Q9C035 493 aa20.64■□□□□ 0.89
ARHGEF1-213ENST00000595897 SCAND2PQ9GZW5 306 aaPredicted RBP20.64■□□□□ 0.89
ARHGEF1-213ENST00000595897 LRRC37A3O60309 1634 aa20.63■□□□□ 0.89
ARHGEF1-213ENST00000595897 PLEKHG1Q9ULL1 1385 aa20.63■□□□□ 0.89
ARHGEF1-213ENST00000595897 RNF20Q5VTR2 975 aa20.63■□□□□ 0.89
ARHGEF1-213ENST00000595897 CCDC186Q7Z3E2 898 aa20.63■□□□□ 0.89
ARHGEF1-213ENST00000595897 KCNB2Q92953 911 aa20.63■□□□□ 0.89
ARHGEF1-213ENST00000595897 ZHX1Q9UKY1 873 aaPredicted RBP20.63■□□□□ 0.89
ARHGEF1-213ENST00000595897 HIP1O00291 1037 aa20.63■□□□□ 0.89
ARHGEF1-213ENST00000595897 HOXB7P09629 217 aa20.63■□□□□ 0.89
ARHGEF1-213ENST00000595897 STK3Q13188 491 aa20.63■□□□□ 0.89
ARHGEF1-213ENST00000595897 MAP3K2Q9Y2U5 619 aa20.63■□□□□ 0.89
ARHGEF1-213ENST00000595897 ELP1O95163 1332 aa20.62■□□□□ 0.89
ARHGEF1-213ENST00000595897 BTBD11A6QL63 1104 aa20.62■□□□□ 0.89
ARHGEF1-213ENST00000595897 SLC27A2O14975 620 aa20.62■□□□□ 0.89
ARHGEF1-213ENST00000595897 MTX1Q13505 466 aa20.62■□□□□ 0.89
ARHGEF1-213ENST00000595897 MAP4K1Q92918 833 aa20.62■□□□□ 0.89
ARHGEF1-213ENST00000595897 ANKRD1Q15327 319 aa20.62■□□□□ 0.89
ARHGEF1-213ENST00000595897 ATP2B3Q16720 1220 aa20.61■□□□□ 0.89
ARHGEF1-213ENST00000595897 FSD1Q9BTV5 496 aa20.61■□□□□ 0.89
ARHGEF1-213ENST00000595897 CCDC8Q9H0W5 538 aaPredicted RBP20.61■□□□□ 0.89
ARHGEF1-213ENST00000595897 CBX8Q9HC52 389 aa20.61■□□□□ 0.89
ARHGEF1-213ENST00000595897 DBF4Q9UBU7 674 aaPredicted RBP20.61■□□□□ 0.89
ARHGEF1-213ENST00000595897 SPDYE4A6NLX3 237 aa20.61■□□□□ 0.89
ARHGEF1-213ENST00000595897 BICD2Q8TD16 824 aa20.61■□□□□ 0.89
ARHGEF1-213ENST00000595897 HDAC5Q9UQL6 1122 aa20.61■□□□□ 0.89
ARHGEF1-213ENST00000595897 ADCY9O60503 1353 aa20.61■□□□□ 0.89
ARHGEF1-213ENST00000595897 ZSCAN20P17040 1043 aaPredicted RBP20.61■□□□□ 0.89
ARHGEF1-213ENST00000595897 G3BP1Q13283 466 aaKnown RBP eCLIP20.61■□□□□ 0.89
ARHGEF1-213ENST00000595897 COL9A3Q14050 684 aaPredicted RBP20.61■□□□□ 0.89
ARHGEF1-213ENST00000595897 CWF19L2Q2TBE0 894 aaKnown RBP20.61■□□□□ 0.89
ARHGEF1-213ENST00000595897 NPHP3Q7Z494 1330 aa20.6■□□□□ 0.89
ARHGEF1-213ENST00000595897 LARP1Q6PKG0 1096 aaKnown RBP20.6■□□□□ 0.89
ARHGEF1-213ENST00000595897 C16orf45Q96MC5 204 aaPredicted RBP20.6■□□□□ 0.89
ARHGEF1-213ENST00000595897 DDX19AQ9NUU7 478 aaKnown RBP20.6■□□□□ 0.89
ARHGEF1-213ENST00000595897 DMTNQ08495 405 aa20.6■□□□□ 0.89
ARHGEF1-213ENST00000595897 LRMPQ12912 555 aa20.6■□□□□ 0.89
ARHGEF1-213ENST00000595897 BOLA2Q9H3K6 86 aa20.6■□□□□ 0.89
ARHGEF1-213ENST00000595897 CEMIPQ8WUJ3 1361 aa20.59■□□□□ 0.89
ARHGEF1-213ENST00000595897 PLPPR3Q6T4P5 718 aa20.59■□□□□ 0.89
ARHGEF1-213ENST00000595897 SIL1Q9H173 461 aa20.58■□□□□ 0.89
ARHGEF1-213ENST00000595897 NRBP1Q9UHY1 535 aa20.58■□□□□ 0.89
ARHGEF1-213ENST00000595897 A0A0D9SFI3 127 aa20.58■□□□□ 0.89
ARHGEF1-213ENST00000595897 ALDH1L1O75891 902 aa20.58■□□□□ 0.89
ARHGEF1-213ENST00000595897 MPRIPQ6WCQ1 1025 aa20.58■□□□□ 0.89
ARHGEF1-213ENST00000595897 LEO1Q8WVC0 666 aaPredicted RBP20.58■□□□□ 0.89
ARHGEF1-213ENST00000595897 EAF2Q96CJ1 260 aaPredicted RBP20.58■□□□□ 0.89
ARHGEF1-213ENST00000595897 DIP2BQ9P265 1576 aa20.58■□□□□ 0.88
ARHGEF1-213ENST00000595897 ZNF165P49910 485 aa20.58■□□□□ 0.88
ARHGEF1-213ENST00000595897 RPS6KB1P23443 525 aa20.57■□□□□ 0.88
ARHGEF1-213ENST00000595897 UTP14CQ5TAP6 766 aaKnown RBP20.57■□□□□ 0.88
ARHGEF1-213ENST00000595897 NBPF6Q5VWK0 638 aa20.57■□□□□ 0.88
ARHGEF1-213ENST00000595897 ZNF530Q6P9A1 599 aaPredicted RBP20.57■□□□□ 0.88
ARHGEF1-213ENST00000595897 NBPF4Q96M43 638 aa20.57■□□□□ 0.88
ARHGEF1-213ENST00000595897 U2AF2P26368 475 aaKnown RBP eCLIP20.56■□□□□ 0.88
ARHGEF1-213ENST00000595897 KSR2Q6VAB6 950 aa20.56■□□□□ 0.88
ARHGEF1-213ENST00000595897 DNAJC25Q9H1X3 360 aa20.56■□□□□ 0.88
ARHGEF1-213ENST00000595897 CLSTN2Q9H4D0 955 aa20.56■□□□□ 0.88
ARHGEF1-213ENST00000595897 NR1I2O75469 434 aa20.56■□□□□ 0.88
ARHGEF1-213ENST00000595897 ZNF75DP51815 510 aa20.56■□□□□ 0.88
ARHGEF1-213ENST00000595897 TAF6LQ9Y6J9 622 aa20.56■□□□□ 0.88
ARHGEF1-213ENST00000595897 NWD1Q149M9 1564 aa20.56■□□□□ 0.88
ARHGEF1-213ENST00000595897 N4BP2Q86UW6 1770 aaPredicted RBP20.55■□□□□ 0.88
ARHGEF1-213ENST00000595897 SASH1O94885 1247 aa20.55■□□□□ 0.88
ARHGEF1-213ENST00000595897 PROSER3Q2NL68 480 aa20.55■□□□□ 0.88
ARHGEF1-213ENST00000595897 TLR7Q9NYK1 1049 aaKnown RBP20.55■□□□□ 0.88
ARHGEF1-213ENST00000595897 CTIFO43310 598 aaKnown RBP20.55■□□□□ 0.88
ARHGEF1-213ENST00000595897 ANKRD7Q92527 254 aa20.55■□□□□ 0.88
ARHGEF1-213ENST00000595897 CLIP2Q9UDT6 1046 aa20.55■□□□□ 0.88
ARHGEF1-213ENST00000595897 PIK3C2AO00443 1686 aa20.55■□□□□ 0.88
ARHGEF1-213ENST00000595897 TNNT1P13805 278 aa20.55■□□□□ 0.88
ARHGEF1-213ENST00000595897 TOB2Q14106 344 aaPredicted RBP20.55■□□□□ 0.88
ARHGEF1-213ENST00000595897 ZSCAN25Q6NSZ9 544 aa20.55■□□□□ 0.88
ARHGEF1-213ENST00000595897 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.55■□□□□ 0.88
ARHGEF1-213ENST00000595897 H3BQV1 296 aa20.54■□□□□ 0.88
ARHGEF1-213ENST00000595897 AIMP1Q12904 312 aaKnown RBP20.54■□□□□ 0.88
ARHGEF1-213ENST00000595897 IFFO2Q5TF58 517 aa20.54■□□□□ 0.88
ARHGEF1-213ENST00000595897 BICC1Q9H694 974 aaKnown RBP20.54■□□□□ 0.88
ARHGEF1-213ENST00000595897 SUCLG2Q96I99 432 aa20.54■□□□□ 0.88
ARHGEF1-213ENST00000595897 GRM8O00222 908 aa20.53■□□□□ 0.88
ARHGEF1-213ENST00000595897 HSP90B1P14625 803 aaKnown RBP20.53■□□□□ 0.88
ARHGEF1-213ENST00000595897 CEBPAP49715 358 aaPredicted RBP20.53■□□□□ 0.88
ARHGEF1-213ENST00000595897 TPD52L1Q16890 204 aaPredicted RBP20.53■□□□□ 0.88
ARHGEF1-213ENST00000595897 UBR1Q8IWV7 1749 aa20.53■□□□□ 0.88
ARHGEF1-213ENST00000595897 GOLGA6L19H0YKK7 550 aa20.52■□□□□ 0.88
ARHGEF1-213ENST00000595897 JAK2O60674 1132 aa20.52■□□□□ 0.88
ARHGEF1-213ENST00000595897 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.52■□□□□ 0.88
ARHGEF1-213ENST00000595897 ZNF589Q86UQ0 364 aaPredicted RBP20.52■□□□□ 0.88
ARHGEF1-213ENST00000595897 PLA2G4DQ86XP0 818 aa20.52■□□□□ 0.88
ARHGEF1-213ENST00000595897 TDRD7Q8NHU6 1098 aaKnown RBP20.52■□□□□ 0.88
ARHGEF1-213ENST00000595897 DDX11Q96FC9 970 aa20.52■□□□□ 0.88
ARHGEF1-213ENST00000595897 GTPBP4Q9BZE4 634 aaKnown RBP20.52■□□□□ 0.88
ARHGEF1-213ENST00000595897 HMG20BQ9P0W2 317 aa20.52■□□□□ 0.88
ARHGEF1-213ENST00000595897 TBX22Q9Y458 520 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 184 ms