RNA–Protein interactions for RNA: ENST00000595789.5

XRCC1-205, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 1,147 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-205ENST00000595789 BABAM1Q9NWV8 329 aa19.57■□□□□ 0.72
XRCC1-205ENST00000595789 TMPOP42166 694 aaKnown RBP19.56■□□□□ 0.72
XRCC1-205ENST00000595789 CC2D2BQ6DHV5 1058 aa19.56■□□□□ 0.72
XRCC1-205ENST00000595789 C3orf67Q6ZVT6 689 aa19.56■□□□□ 0.72
XRCC1-205ENST00000595789 ITGBL1O95965 494 aaPredicted RBP19.55■□□□□ 0.72
XRCC1-205ENST00000595789 PROSER3Q2NL68 480 aa19.55■□□□□ 0.72
XRCC1-205ENST00000595789 SLC51AQ86UW1 340 aa19.55■□□□□ 0.72
XRCC1-205ENST00000595789 CRAMP1Q96RY5 1269 aa19.55■□□□□ 0.72
XRCC1-205ENST00000595789 SCN4AP35499 1836 aa19.55■□□□□ 0.72
XRCC1-205ENST00000595789 EIF2S2P20042 333 aaKnown RBP19.54■□□□□ 0.72
XRCC1-205ENST00000595789 SLC10A5Q5PT55 438 aa19.54■□□□□ 0.72
XRCC1-205ENST00000595789 RPGRQ92834 1020 aaKnown RBP19.54■□□□□ 0.72
XRCC1-205ENST00000595789 HACL1Q9UJ83 578 aa19.54■□□□□ 0.72
XRCC1-205ENST00000595789 ANXA1P04083 346 aa19.53■□□□□ 0.72
XRCC1-205ENST00000595789 HSPA1AP0DMV8 641 aaKnown RBP19.53■□□□□ 0.72
XRCC1-205ENST00000595789 HSPA1BP0DMV9 641 aaKnown RBP19.53■□□□□ 0.72
XRCC1-205ENST00000595789 PARP10Q53GL7 1025 aa19.53■□□□□ 0.72
XRCC1-205ENST00000595789 GPC2Q8N158 579 aa19.53■□□□□ 0.72
XRCC1-205ENST00000595789 RBM17Q96I25 401 aaKnown RBP19.53■□□□□ 0.72
XRCC1-205ENST00000595789 COL4A5P29400 1685 aa19.52■□□□□ 0.72
XRCC1-205ENST00000595789 EPHX2P34913 555 aa19.52■□□□□ 0.72
XRCC1-205ENST00000595789 PPP1R42Q7Z4L9 355 aa19.52■□□□□ 0.72
XRCC1-205ENST00000595789 RNF123Q5XPI4 1314 aa19.51■□□□□ 0.71
XRCC1-205ENST00000595789 GRIPAP1Q4V328 841 aa19.51■□□□□ 0.71
XRCC1-205ENST00000595789 EAPPQ56P03 285 aaPredicted RBP19.51■□□□□ 0.71
XRCC1-205ENST00000595789 JDP2Q8WYK2 163 aa19.51■□□□□ 0.71
XRCC1-205ENST00000595789 MKRN1Q9UHC7 482 aaKnown RBP19.51■□□□□ 0.71
XRCC1-205ENST00000595789 CHL1O00533 1208 aa19.5■□□□□ 0.71
XRCC1-205ENST00000595789 LMOD3Q0VAK6 560 aa19.5■□□□□ 0.71
XRCC1-205ENST00000595789 UTP14AQ9BVJ6 771 aaKnown RBP19.5■□□□□ 0.71
XRCC1-205ENST00000595789 PPEF1O14829 653 aaPredicted RBP19.49■□□□□ 0.71
XRCC1-205ENST00000595789 DDX10Q13206 875 aaKnown RBP19.49■□□□□ 0.71
XRCC1-205ENST00000595789 COPS6Q7L5N1 327 aa19.49■□□□□ 0.71
XRCC1-205ENST00000595789 PNMA8AQ86V59 439 aaPredicted RBP19.49■□□□□ 0.71
XRCC1-205ENST00000595789 NLRP3Q96P20 1036 aa19.49■□□□□ 0.71
XRCC1-205ENST00000595789 TRIM35Q9UPQ4 493 aa19.49■□□□□ 0.71
XRCC1-205ENST00000595789 ADAMTSL1Q8N6G6 1762 aa19.49■□□□□ 0.71
XRCC1-205ENST00000595789 CNTNAP1P78357 1384 aa19.48■□□□□ 0.71
XRCC1-205ENST00000595789 TCERG1O14776 1098 aaKnown RBP19.48■□□□□ 0.71
XRCC1-205ENST00000595789 KRT24Q2M2I5 525 aa19.48■□□□□ 0.71
XRCC1-205ENST00000595789 CCDC146Q8IYE0 955 aa19.48■□□□□ 0.71
XRCC1-205ENST00000595789 XAGE3Q8WTP9 111 aa19.48■□□□□ 0.71
XRCC1-205ENST00000595789 CLEC11AQ9Y240 323 aa19.48■□□□□ 0.71
XRCC1-205ENST00000595789 MYBBP1AQ9BQG0 1328 aaKnown RBP19.48■□□□□ 0.71
XRCC1-205ENST00000595789 TMEM88BA6NKF7 163 aa19.47■□□□□ 0.71
XRCC1-205ENST00000595789 EIF6P56537 245 aaKnown RBP19.47■□□□□ 0.71
XRCC1-205ENST00000595789 NEUROD2Q15784 382 aa19.47■□□□□ 0.71
XRCC1-205ENST00000595789 NLRP10Q86W26 655 aa19.47■□□□□ 0.71
XRCC1-205ENST00000595789 CNTROBQ8N137 903 aa19.47■□□□□ 0.71
XRCC1-205ENST00000595789 LARGE2Q8N3Y3 721 aa19.47■□□□□ 0.71
XRCC1-205ENST00000595789 NECTIN2Q92692 538 aa19.47■□□□□ 0.71
XRCC1-205ENST00000595789 DDX21Q9NR30 783 aaKnown RBP eCLIP19.47■□□□□ 0.71
XRCC1-205ENST00000595789 ATP6V0A2Q9Y487 856 aa19.47■□□□□ 0.71
XRCC1-205ENST00000595789 SCNN1DP51172 638 aa19.46■□□□□ 0.71
XRCC1-205ENST00000595789 AIMP1Q12904 312 aaKnown RBP19.46■□□□□ 0.71
XRCC1-205ENST00000595789 TCIRG1Q13488 830 aa19.46■□□□□ 0.71
XRCC1-205ENST00000595789 MAP1SQ66K74 1059 aaPredicted RBP19.46■□□□□ 0.71
XRCC1-205ENST00000595789 TNS4Q8IZW8 715 aa19.46■□□□□ 0.71
XRCC1-205ENST00000595789 GJA3Q9Y6H8 435 aa19.46■□□□□ 0.71
XRCC1-205ENST00000595789 ABCC4O15439 1325 aa19.46■□□□□ 0.71
XRCC1-205ENST00000595789 HSP90AB3PQ58FF7 597 aa19.45■□□□□ 0.7
XRCC1-205ENST00000595789 RUNDC1Q96C34 613 aa19.45■□□□□ 0.7
XRCC1-205ENST00000595789 HCLS1P14317 486 aaPredicted RBP19.44■□□□□ 0.7
XRCC1-205ENST00000595789 EPS15P42566 896 aa19.44■□□□□ 0.7
XRCC1-205ENST00000595789 VEGFBP49765 207 aa19.44■□□□□ 0.7
XRCC1-205ENST00000595789 RTFDC1Q9BY42 306 aaPredicted RBP19.44■□□□□ 0.7
XRCC1-205ENST00000595789 VPS33BQ9H267 617 aa19.44■□□□□ 0.7
XRCC1-205ENST00000595789 ADAMTS8Q9UP79 889 aa19.44■□□□□ 0.7
XRCC1-205ENST00000595789 LTBP1Q14766 1721 aa19.43■□□□□ 0.7
XRCC1-205ENST00000595789 BBOX1O75936 387 aa19.43■□□□□ 0.7
XRCC1-205ENST00000595789 PPIP5K2O43314 1243 aa19.42■□□□□ 0.7
XRCC1-205ENST00000595789 AOC3Q16853 763 aa19.42■□□□□ 0.7
XRCC1-205ENST00000595789 SP8Q8IXZ3 490 aa19.42■□□□□ 0.7
XRCC1-205ENST00000595789 CHPF2Q9P2E5 772 aa19.42■□□□□ 0.7
XRCC1-205ENST00000595789 TRMT112Q9UI30 125 aaKnown RBP19.42■□□□□ 0.7
XRCC1-205ENST00000595789 RASSF10A6NK89 507 aa19.41■□□□□ 0.7
XRCC1-205ENST00000595789 NIM1KQ8IY84 436 aa19.41■□□□□ 0.7
XRCC1-205ENST00000595789 LAS1LQ9Y4W2 734 aaKnown RBP19.41■□□□□ 0.7
XRCC1-205ENST00000595789 FOXN1O15353 648 aa19.4■□□□□ 0.7
XRCC1-205ENST00000595789 HOXB7P09629 217 aa19.4■□□□□ 0.7
XRCC1-205ENST00000595789 LMOD1P29536 600 aaPredicted RBP19.4■□□□□ 0.7
XRCC1-205ENST00000595789 CXCL9Q07325 125 aa19.4■□□□□ 0.7
XRCC1-205ENST00000595789 SH3TC1Q8TE82 1336 aa19.4■□□□□ 0.7
XRCC1-205ENST00000595789 FMR1Q06787 632 aaKnown RBP eCLIP19.39■□□□□ 0.69
XRCC1-205ENST00000595789 WDR43Q15061 677 aaKnown RBP eCLIP19.39■□□□□ 0.69
XRCC1-205ENST00000595789 ANKRD13DQ6ZTN6 518 aa19.39■□□□□ 0.69
XRCC1-205ENST00000595789 USP50Q70EL3 339 aaPredicted RBP19.39■□□□□ 0.69
XRCC1-205ENST00000595789 SUPT20HQ8NEM7 779 aa19.39■□□□□ 0.69
XRCC1-205ENST00000595789 PLBD2Q8NHP8 589 aa19.39■□□□□ 0.69
XRCC1-205ENST00000595789 CFAP44Q96MT7 982 aa19.39■□□□□ 0.69
XRCC1-205ENST00000595789 ISCA1Q9BUE6 129 aa19.39■□□□□ 0.69
XRCC1-205ENST00000595789 TMX4Q9H1E5 349 aaPredicted RBP19.39■□□□□ 0.69
XRCC1-205ENST00000595789 ZNRF3Q9ULT6 936 aa19.39■□□□□ 0.69
XRCC1-205ENST00000595789 KIAA2012Q0VF49 1180 aa19.38■□□□□ 0.69
XRCC1-205ENST00000595789 GRAPQ13588 217 aa19.38■□□□□ 0.69
XRCC1-205ENST00000595789 DEFB115Q30KQ5 88 aa19.38■□□□□ 0.69
XRCC1-205ENST00000595789 HDGFL1Q5TGJ6 251 aa19.38■□□□□ 0.69
XRCC1-205ENST00000595789 DPP8Q6V1X1 898 aaPredicted RBP19.38■□□□□ 0.69
XRCC1-205ENST00000595789 DDX46Q7L014 1031 aaKnown RBP19.38■□□□□ 0.69
XRCC1-205ENST00000595789 MPNDQ8N594 471 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms