RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 HOXA10P31260 410 aaPredicted RBP23.38■■□□□ 1.33
HOMER3-208ENST00000595756 PPP1R42Q7Z4L9 355 aa23.38■■□□□ 1.33
HOMER3-208ENST00000595756 RPGRQ92834 1020 aaKnown RBP23.38■■□□□ 1.33
HOMER3-208ENST00000595756 HOXB7P09629 217 aa23.37■■□□□ 1.33
HOMER3-208ENST00000595756 OLFM4Q6UX06 510 aa23.37■■□□□ 1.33
HOMER3-208ENST00000595756 ANXA1P04083 346 aa23.36■■□□□ 1.33
HOMER3-208ENST00000595756 CC2D2BQ6DHV5 1058 aa23.36■■□□□ 1.33
HOMER3-208ENST00000595756 PSMD1Q99460 953 aa23.36■■□□□ 1.33
HOMER3-208ENST00000595756 ZNF277Q9NRM2 450 aaPredicted RBP23.36■■□□□ 1.33
HOMER3-208ENST00000595756 DDNO94850 711 aaPredicted RBP23.35■■□□□ 1.33
HOMER3-208ENST00000595756 HSP90AB3PQ58FF7 597 aa23.35■■□□□ 1.33
HOMER3-208ENST00000595756 L3MBTL3Q96JM7 780 aaPredicted RBP23.35■■□□□ 1.33
HOMER3-208ENST00000595756 DDX21Q9NR30 783 aaKnown RBP eCLIP23.35■■□□□ 1.33
HOMER3-208ENST00000595756 IARSP41252 1262 aaKnown RBP23.34■■□□□ 1.33
HOMER3-208ENST00000595756 KLRG1Q96E93 195 aa23.34■■□□□ 1.33
HOMER3-208ENST00000595756 CRAMP1Q96RY5 1269 aa23.34■■□□□ 1.33
HOMER3-208ENST00000595756 IQCA1LA6NCM1 817 aa23.33■■□□□ 1.33
HOMER3-208ENST00000595756 HTRA3P83110 453 aa23.33■■□□□ 1.33
HOMER3-208ENST00000595756 KRT24Q2M2I5 525 aa23.33■■□□□ 1.33
HOMER3-208ENST00000595756 GRIPAP1Q4V328 841 aa23.33■■□□□ 1.33
HOMER3-208ENST00000595756 COPS6Q7L5N1 327 aa23.33■■□□□ 1.33
HOMER3-208ENST00000595756 XAGE3Q8WTP9 111 aa23.33■■□□□ 1.33
HOMER3-208ENST00000595756 NECTIN2Q92692 538 aa23.33■■□□□ 1.33
HOMER3-208ENST00000595756 RBM17Q96I25 401 aaKnown RBP23.33■■□□□ 1.33
HOMER3-208ENST00000595756 CFAP44Q96MT7 982 aa23.33■■□□□ 1.33
HOMER3-208ENST00000595756 UTP14AQ9BVJ6 771 aaKnown RBP23.33■■□□□ 1.33
HOMER3-208ENST00000595756 LAS1LQ9Y4W2 734 aaKnown RBP23.33■■□□□ 1.33
HOMER3-208ENST00000595756 ADAMTSL1Q8N6G6 1762 aa23.32■■□□□ 1.32
HOMER3-208ENST00000595756 ZNF541Q9H0D2 1346 aa23.32■■□□□ 1.32
HOMER3-208ENST00000595756 DDX60Q8IY21 1712 aaKnown RBP23.31■■□□□ 1.32
HOMER3-208ENST00000595756 PPEF1O14829 653 aaPredicted RBP23.31■■□□□ 1.32
HOMER3-208ENST00000595756 SLC10A5Q5PT55 438 aa23.31■■□□□ 1.32
HOMER3-208ENST00000595756 HDGFL1Q5TGJ6 251 aa23.31■■□□□ 1.32
HOMER3-208ENST00000595756 C3orf67Q6ZVT6 689 aa23.31■■□□□ 1.32
HOMER3-208ENST00000595756 SYNE4Q8N205 404 aa23.31■■□□□ 1.32
HOMER3-208ENST00000595756 NLRP3Q96P20 1036 aa23.31■■□□□ 1.32
HOMER3-208ENST00000595756 CHPF2Q9P2E5 772 aa23.31■■□□□ 1.32
HOMER3-208ENST00000595756 COL4A5P29400 1685 aa23.31■■□□□ 1.32
HOMER3-208ENST00000595756 FZD9O00144 591 aa23.3■■□□□ 1.32
HOMER3-208ENST00000595756 AIMP1Q12904 312 aaKnown RBP23.3■■□□□ 1.32
HOMER3-208ENST00000595756 NLRP10Q86W26 655 aa23.3■■□□□ 1.32
HOMER3-208ENST00000595756 CHADLQ6NUI6 762 aa23.29■■□□□ 1.32
HOMER3-208ENST00000595756 JMYQ8N9B5 988 aa23.29■■□□□ 1.32
HOMER3-208ENST00000595756 TCIRG1Q13488 830 aa23.28■■□□□ 1.32
HOMER3-208ENST00000595756 DBF4Q9UBU7 674 aaPredicted RBP23.28■■□□□ 1.32
HOMER3-208ENST00000595756 LRRC37AA6NMS7 1700 aa23.28■■□□□ 1.32
HOMER3-208ENST00000595756 ZNF853P0CG23 659 aa23.27■■□□□ 1.32
HOMER3-208ENST00000595756 MBIPQ9NS73 344 aa23.27■■□□□ 1.32
HOMER3-208ENST00000595756 ABCC4O15439 1325 aa23.27■■□□□ 1.32
HOMER3-208ENST00000595756 POTEIP0CG38 1075 aa23.26■■□□□ 1.31
HOMER3-208ENST00000595756 POTEJP0CG39 1038 aa23.26■■□□□ 1.31
HOMER3-208ENST00000595756 CALD1Q05682 793 aaKnown RBP23.26■■□□□ 1.31
HOMER3-208ENST00000595756 LDHDQ86WU2 507 aa23.26■■□□□ 1.31
HOMER3-208ENST00000595756 JDP2Q8WYK2 163 aa23.26■■□□□ 1.31
HOMER3-208ENST00000595756 TAF1DQ9H5J8 278 aaPredicted RBP23.26■■□□□ 1.31
HOMER3-208ENST00000595756 IFT57Q9NWB7 429 aa23.26■■□□□ 1.31
HOMER3-208ENST00000595756 APAF1O14727 1248 aa23.25■■□□□ 1.31
HOMER3-208ENST00000595756 DUSP27Q5VZP5 1158 aa23.25■■□□□ 1.31
HOMER3-208ENST00000595756 GPC2Q8N158 579 aa23.25■■□□□ 1.31
HOMER3-208ENST00000595756 PLBD2Q8NHP8 589 aa23.25■■□□□ 1.31
HOMER3-208ENST00000595756 SH3TC1Q8TE82 1336 aa23.25■■□□□ 1.31
HOMER3-208ENST00000595756 HYPKQ9NX55 129 aa23.24■■□□□ 1.31
HOMER3-208ENST00000595756 TRMT112Q9UI30 125 aaKnown RBP23.24■■□□□ 1.31
HOMER3-208ENST00000595756 HACL1Q9UJ83 578 aa23.24■■□□□ 1.31
HOMER3-208ENST00000595756 ATP6V0A2Q9Y487 856 aa23.24■■□□□ 1.31
HOMER3-208ENST00000595756 LTBP1Q14766 1721 aa23.23■■□□□ 1.31
HOMER3-208ENST00000595756 GNAI1P63096 354 aa23.23■■□□□ 1.31
HOMER3-208ENST00000595756 SLC51AQ86UW1 340 aa23.23■■□□□ 1.31
HOMER3-208ENST00000595756 TMX4Q9H1E5 349 aaPredicted RBP23.23■■□□□ 1.31
HOMER3-208ENST00000595756 ANKRD13DQ6ZTN6 518 aa23.22■■□□□ 1.31
HOMER3-208ENST00000595756 HCLS1P14317 486 aaPredicted RBP23.21■■□□□ 1.31
HOMER3-208ENST00000595756 EIF6P56537 245 aaKnown RBP23.21■■□□□ 1.31
HOMER3-208ENST00000595756 IFFO2Q5TF58 517 aa23.21■■□□□ 1.31
HOMER3-208ENST00000595756 LARGE2Q8N3Y3 721 aa23.21■■□□□ 1.31
HOMER3-208ENST00000595756 ISCA1Q9BUE6 129 aa23.21■■□□□ 1.31
HOMER3-208ENST00000595756 VPS33BQ9H267 617 aa23.21■■□□□ 1.31
HOMER3-208ENST00000595756 TAF1P21675 1872 aa23.21■■□□□ 1.31
HOMER3-208ENST00000595756 PASKQ96RG2 1323 aa23.2■■□□□ 1.3
HOMER3-208ENST00000595756 BBOX1O75936 387 aa23.2■■□□□ 1.3
HOMER3-208ENST00000595756 EPHX2P34913 555 aa23.2■■□□□ 1.3
HOMER3-208ENST00000595756 CREBZFQ9NS37 354 aa23.2■■□□□ 1.3
HOMER3-208ENST00000595756 DUOX1Q9NRD9 1551 aa23.19■■□□□ 1.3
HOMER3-208ENST00000595756 TCERG1O14776 1098 aaKnown RBP23.19■■□□□ 1.3
HOMER3-208ENST00000595756 DDX46Q7L014 1031 aaKnown RBP23.19■■□□□ 1.3
HOMER3-208ENST00000595756 PNMA8AQ86V59 439 aaPredicted RBP23.19■■□□□ 1.3
HOMER3-208ENST00000595756 SUPT20HQ8NEM7 779 aa23.19■■□□□ 1.3
HOMER3-208ENST00000595756 RTFDC1Q9BY42 306 aaPredicted RBP23.19■■□□□ 1.3
HOMER3-208ENST00000595756 PPIP5K2O43314 1243 aa23.18■■□□□ 1.3
HOMER3-208ENST00000595756 GRAPQ13588 217 aa23.18■■□□□ 1.3
HOMER3-208ENST00000595756 NIM1KQ8IY84 436 aa23.18■■□□□ 1.3
HOMER3-208ENST00000595756 GRAPLQ8TC17 118 aaPredicted RBP23.18■■□□□ 1.3
HOMER3-208ENST00000595756 EAPPQ56P03 285 aaPredicted RBP23.17■■□□□ 1.3
HOMER3-208ENST00000595756 TMC4Q7Z404 712 aa23.17■■□□□ 1.3
HOMER3-208ENST00000595756 SP8Q8IXZ3 490 aa23.17■■□□□ 1.3
HOMER3-208ENST00000595756 TRIM28Q13263 835 aaKnown RBP23.16■■□□□ 1.3
HOMER3-208ENST00000595756 DIEXFQ68CQ4 756 aaKnown RBP23.16■■□□□ 1.3
HOMER3-208ENST00000595756 GOLGA2Q08379 1002 aa23.15■■□□□ 1.3
HOMER3-208ENST00000595756 AOC3Q16853 763 aa23.15■■□□□ 1.3
HOMER3-208ENST00000595756 DPP8Q6V1X1 898 aaPredicted RBP23.15■■□□□ 1.3
HOMER3-208ENST00000595756 MRS2Q9HD23 443 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms