RNA–Protein interactions for RNA: ENST00000594325.1

CRLF1-203, Transcript of cytokine receptor like factor 1, humanhuman

TSL 3

Gene CRLF1, Length 1,020 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF1-203ENST00000594325 ZC3H4Q9UPT8 1303 aaKnown RBP29.34■■■□□ 2.29
CRLF1-203ENST00000594325 ABCC12Q96J65 1359 aa29.34■■■□□ 2.29
CRLF1-203ENST00000594325 RIC1Q4ADV7 1423 aa29.34■■■□□ 2.29
CRLF1-203ENST00000594325 NFKBIEO00221 500 aa29.33■■■□□ 2.29
CRLF1-203ENST00000594325 C1QTNF8P60827 252 aa29.33■■■□□ 2.29
CRLF1-203ENST00000594325 SLC10A5Q5PT55 438 aa29.33■■■□□ 2.29
CRLF1-203ENST00000594325 RIC3Q7Z5B4 369 aa29.33■■■□□ 2.29
CRLF1-203ENST00000594325 COL11A2P13942 1736 aaPredicted RBP29.33■■■□□ 2.29
CRLF1-203ENST00000594325 CCDC93Q567U6 631 aa29.32■■■□□ 2.28
CRLF1-203ENST00000594325 TSPYL6Q8N831 410 aa29.32■■■□□ 2.28
CRLF1-203ENST00000594325 RBM17Q96I25 401 aaKnown RBP29.32■■■□□ 2.28
CRLF1-203ENST00000594325 TAOK3Q9H2K8 898 aa29.32■■■□□ 2.28
CRLF1-203ENST00000594325 TRMT112Q9UI30 125 aaKnown RBP29.32■■■□□ 2.28
CRLF1-203ENST00000594325 STK31Q9BXU1 1019 aa29.31■■■□□ 2.28
CRLF1-203ENST00000594325 KDM2BQ8NHM5 1336 aa29.3■■■□□ 2.28
CRLF1-203ENST00000594325 LTBP3Q9NS15 1303 aa29.3■■■□□ 2.28
CRLF1-203ENST00000594325 DDX58O95786 925 aaKnown RBP29.3■■■□□ 2.28
CRLF1-203ENST00000594325 HOXA10P31260 410 aaPredicted RBP29.3■■■□□ 2.28
CRLF1-203ENST00000594325 TWISTNBQ3B726 338 aaPredicted RBP29.3■■■□□ 2.28
CRLF1-203ENST00000594325 C7orf43Q8WVR3 580 aa29.3■■■□□ 2.28
CRLF1-203ENST00000594325 SH3TC1Q8TE82 1336 aa29.29■■■□□ 2.28
CRLF1-203ENST00000594325 RTKN2Q8IZC4 609 aa29.29■■■□□ 2.28
CRLF1-203ENST00000594325 ISCA1Q9BUE6 129 aa29.29■■■□□ 2.28
CRLF1-203ENST00000594325 PHAXQ9H814 394 aaKnown RBP29.29■■■□□ 2.28
CRLF1-203ENST00000594325 CRAMP1Q96RY5 1269 aa29.28■■■□□ 2.28
CRLF1-203ENST00000594325 TRIM28Q13263 835 aaKnown RBP29.27■■■□□ 2.28
CRLF1-203ENST00000594325 CC2D2BQ6DHV5 1058 aa29.27■■■□□ 2.28
CRLF1-203ENST00000594325 SLX4Q8IY92 1834 aa29.27■■■□□ 2.28
CRLF1-203ENST00000594325 FANCIQ9NVI1 1328 aa29.25■■■□□ 2.27
CRLF1-203ENST00000594325 ATP5J2-PTCD1G3V325 749 aa29.25■■■□□ 2.27
CRLF1-203ENST00000594325 TMX4Q9H1E5 349 aaPredicted RBP29.25■■■□□ 2.27
CRLF1-203ENST00000594325 MYH16Q9H6N6 1097 aa29.25■■■□□ 2.27
CRLF1-203ENST00000594325 SBF1O95248 1867 aa29.24■■■□□ 2.27
CRLF1-203ENST00000594325 PRELPP51888 382 aa29.24■■■□□ 2.27
CRLF1-203ENST00000594325 GRIPAP1Q4V328 841 aa29.24■■■□□ 2.27
CRLF1-203ENST00000594325 FKBP4Q02790 459 aaKnown RBP eCLIP29.23■■■□□ 2.27
CRLF1-203ENST00000594325 ARFGEF2Q9Y6D5 1785 aa29.22■■■□□ 2.27
CRLF1-203ENST00000594325 KIF3CO14782 793 aa29.22■■■□□ 2.27
CRLF1-203ENST00000594325 HCLS1P14317 486 aaPredicted RBP29.22■■■□□ 2.27
CRLF1-203ENST00000594325 DPY19L2Q6NUT2 758 aa29.22■■■□□ 2.27
CRLF1-203ENST00000594325 CCER2I3L3R5 266 aa29.21■■■□□ 2.27
CRLF1-203ENST00000594325 HSP90B1P14625 803 aaKnown RBP29.21■■■□□ 2.27
CRLF1-203ENST00000594325 C3orf67Q6ZVT6 689 aa29.21■■■□□ 2.27
CRLF1-203ENST00000594325 TNRC6CQ9HCJ0 1690 aaKnown RBP29.21■■■□□ 2.27
CRLF1-203ENST00000594325 ANKRD36CQ5JPF3 1778 aa29.21■■■□□ 2.27
CRLF1-203ENST00000594325 GLTPD2A6NH11 291 aa29.2■■■□□ 2.26
CRLF1-203ENST00000594325 SLC4A2P04920 1241 aa29.2■■■□□ 2.26
CRLF1-203ENST00000594325 MYD88Q99836 296 aa29.2■■■□□ 2.26
CRLF1-203ENST00000594325 PPEF1O14829 653 aaPredicted RBP29.19■■■□□ 2.26
CRLF1-203ENST00000594325 KSR2Q6VAB6 950 aa29.19■■■□□ 2.26
CRLF1-203ENST00000594325 DDX46Q7L014 1031 aaKnown RBP29.19■■■□□ 2.26
CRLF1-203ENST00000594325 FAM89AQ96GI7 184 aa29.19■■■□□ 2.26
CRLF1-203ENST00000594325 METTL22Q9BUU2 404 aaPredicted RBP29.19■■■□□ 2.26
CRLF1-203ENST00000594325 NMRK2Q9NPI5 230 aa29.19■■■□□ 2.26
CRLF1-203ENST00000594325 FER1L6Q2WGJ9 1857 aa29.19■■■□□ 2.26
CRLF1-203ENST00000594325 TCERG1O14776 1098 aaKnown RBP29.18■■■□□ 2.26
CRLF1-203ENST00000594325 BBOX1O75936 387 aa29.18■■■□□ 2.26
CRLF1-203ENST00000594325 EXOSC9Q06265 439 aaKnown RBP29.18■■■□□ 2.26
CRLF1-203ENST00000594325 C16orf71Q8IYS4 520 aaPredicted RBP29.18■■■□□ 2.26
CRLF1-203ENST00000594325 SYNE4Q8N205 404 aa29.18■■■□□ 2.26
CRLF1-203ENST00000594325 CCDC191Q8NCU4 936 aa29.18■■■□□ 2.26
CRLF1-203ENST00000594325 CACNA1SQ13698 1873 aa29.18■■■□□ 2.26
CRLF1-203ENST00000594325 VAMP4O75379 141 aa29.17■■■□□ 2.26
CRLF1-203ENST00000594325 MAP3K2Q9Y2U5 619 aa29.17■■■□□ 2.26
CRLF1-203ENST00000594325 NEXNQ0ZGT2 675 aa29.16■■■□□ 2.26
CRLF1-203ENST00000594325 OLFM4Q6UX06 510 aa29.16■■■□□ 2.26
CRLF1-203ENST00000594325 ZBTB38Q8NAP3 1195 aaPredicted RBP29.16■■■□□ 2.26
CRLF1-203ENST00000594325 PSMD1Q99460 953 aa29.16■■■□□ 2.26
CRLF1-203ENST00000594325 CWC25Q9NXE8 425 aaPredicted RBP29.16■■■□□ 2.26
CRLF1-203ENST00000594325 PI4KAP2A4QPH2 592 aa29.15■■■□□ 2.26
CRLF1-203ENST00000594325 TOMM70O94826 608 aa29.15■■■□□ 2.26
CRLF1-203ENST00000594325 PI4KAP1Q8N8J0 262 aa29.15■■■□□ 2.26
CRLF1-203ENST00000594325 ZNF428Q96B54 188 aa29.15■■■□□ 2.26
CRLF1-203ENST00000594325 RRAGCQ9HB90 399 aa29.15■■■□□ 2.26
CRLF1-203ENST00000594325 ABCC4O15439 1325 aa29.15■■■□□ 2.26
CRLF1-203ENST00000594325 IRS4O14654 1257 aaPredicted RBP29.14■■■□□ 2.26
CRLF1-203ENST00000594325 SPINK5Q9NQ38 1064 aaPredicted RBP29.14■■■□□ 2.26
CRLF1-203ENST00000594325 ZNF277Q9NRM2 450 aaPredicted RBP29.14■■■□□ 2.26
CRLF1-203ENST00000594325 ATP6V0A2Q9Y487 856 aa29.14■■■□□ 2.26
CRLF1-203ENST00000594325 SF3B3Q15393 1217 aaKnown RBP29.13■■■□□ 2.25
CRLF1-203ENST00000594325 IARSP41252 1262 aaKnown RBP29.12■■■□□ 2.25
CRLF1-203ENST00000594325 GRAPQ13588 217 aa29.12■■■□□ 2.25
CRLF1-203ENST00000594325 RTL5Q5HYW3 569 aaPredicted RBP29.12■■■□□ 2.25
CRLF1-203ENST00000594325 TMC4Q7Z404 712 aa29.12■■■□□ 2.25
CRLF1-203ENST00000594325 GRAPLQ8TC17 118 aaPredicted RBP29.12■■■□□ 2.25
CRLF1-203ENST00000594325 CCDC88AQ3V6T2 1871 aa29.12■■■□□ 2.25
CRLF1-203ENST00000594325 PCCAP05165 728 aaPredicted RBP29.11■■■□□ 2.25
CRLF1-203ENST00000594325 VEGFAP15692 232 aaPredicted RBP29.11■■■□□ 2.25
CRLF1-203ENST00000594325 FLIIQ13045 1269 aa29.11■■■□□ 2.25
CRLF1-203ENST00000594325 ZNF521Q96K83 1311 aa29.11■■■□□ 2.25
CRLF1-203ENST00000594325 G2E3Q7L622 706 aa29.1■■■□□ 2.25
CRLF1-203ENST00000594325 SP8Q8IXZ3 490 aa29.1■■■□□ 2.25
CRLF1-203ENST00000594325 FKBP5Q13451 457 aaPredicted RBP29.09■■■□□ 2.25
CRLF1-203ENST00000594325 JDP2Q8WYK2 163 aa29.09■■■□□ 2.25
CRLF1-203ENST00000594325 SUPT20HQ8NEM7 779 aa29.08■■■□□ 2.25
CRLF1-203ENST00000594325 RBM46Q8TBY0 533 aaKnown RBP29.08■■■□□ 2.25
CRLF1-203ENST00000594325 E9PSI1 815 aa29.07■■■□□ 2.24
CRLF1-203ENST00000594325 VPS33BQ9H267 617 aa29.07■■■□□ 2.24
CRLF1-203ENST00000594325 DICER1Q9UPY3 1922 aaKnown RBP29.07■■■□□ 2.24
CRLF1-203ENST00000594325 PDE8AO60658 829 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms