RNA–Protein interactions for RNA: ENST00000594325.1

CRLF1-203, Transcript of cytokine receptor like factor 1, humanhuman

TSL 3

Gene CRLF1, Length 1,020 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF1-203ENST00000594325 NISCHQ9Y2I1 1504 aa55.53■■■■■ 6.48
CRLF1-203ENST00000594325 CCDC180Q9P1Z9 1646 aa49.45■■■■■ 5.51
CRLF1-203ENST00000594325 ABCC9O60706 1549 aa48.78■■■■■ 5.4
CRLF1-203ENST00000594325 RB1CC1Q8TDY2 1594 aa46.79■■■■■ 5.08
CRLF1-203ENST00000594325 DCAF8L2P0C7V8 631 aa46.72■■■■■ 5.07
CRLF1-203ENST00000594325 NACADO15069 1562 aa46.67■■■■■ 5.06
CRLF1-203ENST00000594325 MYO15BQ96JP2 1530 aa46.28■■■■■ 5
CRLF1-203ENST00000594325 ZCCHC6Q5VYS8 1495 aaKnown RBP46.15■■■■■ 4.98
CRLF1-203ENST00000594325 DCAF1Q9Y4B6 1507 aa45.94■■■■■ 4.95
CRLF1-203ENST00000594325 PABPN1Q86U42 306 aaKnown RBP eCLIP45.6■■■■■ 4.893e-6■■■■□ 23.3
CRLF1-203ENST00000594325 UNC13AQ9UPW8 1703 aa45.52■■■■■ 4.88
CRLF1-203ENST00000594325 BICRAQ9NZM4 1560 aa45.27■■■■■ 4.84
CRLF1-203ENST00000594325 SCRIBQ14160 1630 aa45.1■■■■■ 4.81
CRLF1-203ENST00000594325 DNAJC5BQ9UF47 199 aa45.08■■■■■ 4.81
CRLF1-203ENST00000594325 SHROOM4Q9ULL8 1493 aa44.91■■■■■ 4.78
CRLF1-203ENST00000594325 EIF4G1Q04637 1599 aaKnown RBP44.17■■■■■ 4.66
CRLF1-203ENST00000594325 CC2D2AQ9P2K1 1620 aa44.06■■■■■ 4.64
CRLF1-203ENST00000594325 CECR2Q9BXF3 1484 aa43.9■■■■■ 4.62
CRLF1-203ENST00000594325 SMARCA4P51532 1647 aa43.11■■■■■ 4.49
CRLF1-203ENST00000594325 BAZ1AQ9NRL2 1556 aaPredicted RBP43.08■■■■■ 4.49
CRLF1-203ENST00000594325 NCAPD3P42695 1498 aa43.08■■■■■ 4.49
CRLF1-203ENST00000594325 ATAD2BQ9ULI0 1458 aa43.04■■■■■ 4.48
CRLF1-203ENST00000594325 SMARCA2P51531 1590 aa42.98■■■■■ 4.47
CRLF1-203ENST00000594325 HMGXB3Q12766 1538 aa42.78■■■■■ 4.44
CRLF1-203ENST00000594325 MROH2BQ7Z745 1585 aa42.74■■■■■ 4.43
CRLF1-203ENST00000594325 PEG3Q9GZU2 1588 aa42.7■■■■■ 4.43
CRLF1-203ENST00000594325 BAZ1BQ9UIG0 1483 aaKnown RBP42.68■■■■■ 4.42
CRLF1-203ENST00000594325 WIZO95785 1651 aa42.23■■■■■ 4.35
CRLF1-203ENST00000594325 RSF1Q96T23 1441 aaPredicted RBP42.2■■■■■ 4.35
CRLF1-203ENST00000594325 ERCC6Q03468 1493 aa42.15■■■■■ 4.34
CRLF1-203ENST00000594325 NESP48681 1621 aa42.06■■■■■ 4.32
CRLF1-203ENST00000594325 LAMC3Q9Y6N6 1575 aa41.97■■■■■ 4.31
CRLF1-203ENST00000594325 CADPSQ9ULU8 1353 aa41.85■■■■■ 4.29
CRLF1-203ENST00000594325 TOP2AP11388 1531 aaKnown RBP41.82■■■■■ 4.29
CRLF1-203ENST00000594325 PDS5BQ9NTI5 1447 aa41.8■■■■■ 4.28
CRLF1-203ENST00000594325 CUX2O14529 1486 aa41.79■■■■■ 4.28
CRLF1-203ENST00000594325 KIF21AQ7Z4S6 1674 aa41.49■■■■■ 4.23
CRLF1-203ENST00000594325 CFTRP13569 1480 aa41.47■■■■■ 4.23
CRLF1-203ENST00000594325 THOC2Q8NI27 1593 aaKnown RBP41.45■■■■■ 4.23
CRLF1-203ENST00000594325 CCDC88BA6NC98 1476 aa41.37■■■■■ 4.21
CRLF1-203ENST00000594325 FANCD2Q9BXW9 1451 aa41.32■■■■■ 4.2
CRLF1-203ENST00000594325 MRC2Q9UBG0 1479 aa41.31■■■■■ 4.2
CRLF1-203ENST00000594325 CEP164Q9UPV0 1460 aa41.3■■■■■ 4.2
CRLF1-203ENST00000594325 WDR62O43379 1518 aa41.13■■■■■ 4.18
CRLF1-203ENST00000594325 SUPT5HO00267 1087 aaKnown RBP40.98■■■■■ 4.15
CRLF1-203ENST00000594325 DNAJC5Q9H3Z4 198 aa40.98■■■■■ 4.15
CRLF1-203ENST00000594325 PRDM2Q13029 1718 aa40.98■■■■■ 4.15
CRLF1-203ENST00000594325 URB2Q14146 1524 aaKnown RBP40.86■■■■■ 4.13
CRLF1-203ENST00000594325 ABCC8Q09428 1581 aa40.68■■■■■ 4.1
CRLF1-203ENST00000594325 TOPBP1Q92547 1522 aa40.59■■■■■ 4.09
CRLF1-203ENST00000594325 DNMBPQ6XZF7 1577 aa40.5■■■■■ 4.07
CRLF1-203ENST00000594325 IFT140Q96RY7 1462 aa40.48■■■■■ 4.07
CRLF1-203ENST00000594325 ZNF608Q9ULD9 1512 aaPredicted RBP40.24■■■■■ 4.03
CRLF1-203ENST00000594325 POLA1P09884 1462 aaPredicted RBP40.22■■■■■ 4.03
CRLF1-203ENST00000594325 SOGA1O94964 1423 aa40.14■■■■■ 4.02
CRLF1-203ENST00000594325 OSCARQ8IYS5 282 aa40.13■■■■■ 4.01
CRLF1-203ENST00000594325 CUX1P39880 1505 aa40.12■■■■■ 4.01
CRLF1-203ENST00000594325 TARBP1Q13395 1621 aaKnown RBP40.1■■■■■ 4.01
CRLF1-203ENST00000594325 FGD5Q6ZNL6 1462 aa40.07■■■■■ 4.01
CRLF1-203ENST00000594325 RAD54L2Q9Y4B4 1467 aa40.06■■■■■ 4
CRLF1-203ENST00000594325 EIF4G3O43432 1585 aaKnown RBP40.02■■■■■ 4
CRLF1-203ENST00000594325 AQRO60306 1485 aaKnown RBP eCLIP40.02■■■■■ 48e-8■■□□□ 12.7
CRLF1-203ENST00000594325 TDRD9Q8NDG6 1382 aaKnown RBP39.93■■■■□ 3.98
CRLF1-203ENST00000594325 WDR97A6NE52 1622 aa39.85■■■■□ 3.97
CRLF1-203ENST00000594325 WRNQ14191 1432 aaPredicted RBP eCLIP39.83■■■■□ 3.97
CRLF1-203ENST00000594325 FBLN2P98095 1184 aa39.74■■■■□ 3.95
CRLF1-203ENST00000594325 ABCA10Q8WWZ4 1543 aa39.7■■■■□ 3.95
CRLF1-203ENST00000594325 TOP2BQ02880 1626 aa39.69■■■■□ 3.94
CRLF1-203ENST00000594325 GRIN2BQ13224 1484 aa39.68■■■■□ 3.94
CRLF1-203ENST00000594325 BIVM-ERCC5R4GMW8 1640 aa39.65■■■■□ 3.94
CRLF1-203ENST00000594325 GAPVD1Q14C86 1478 aa39.63■■■■□ 3.94
CRLF1-203ENST00000594325 SNAPC4Q5SXM2 1469 aa39.62■■■■□ 3.93
CRLF1-203ENST00000594325 SYNJ1O43426 1573 aa39.62■■■■□ 3.93
CRLF1-203ENST00000594325 MAGI1Q96QZ7 1491 aaPredicted RBP39.6■■■■□ 3.93
CRLF1-203ENST00000594325 CHMP7Q8WUX9 453 aaPredicted RBP39.59■■■■□ 3.93
CRLF1-203ENST00000594325 CHD1O14646 1710 aa39.54■■■■□ 3.92
CRLF1-203ENST00000594325 TRIM41Q8WV44 630 aa39.5■■■■□ 3.91
CRLF1-203ENST00000594325 ABCA5Q8WWZ7 1642 aa39.47■■■■□ 3.91
CRLF1-203ENST00000594325 SYNJ2O15056 1496 aa39.44■■■■□ 3.9
CRLF1-203ENST00000594325 PBRM1Q86U86 1689 aa39.42■■■■□ 3.9
CRLF1-203ENST00000594325 ARHGEF11O15085 1522 aa39.3■■■■□ 3.88
CRLF1-203ENST00000594325 RIMBP3CA6NJZ7 1639 aa39.3■■■■□ 3.88
CRLF1-203ENST00000594325 RIMBP3BA6NNM3 1639 aa39.3■■■■□ 3.88
CRLF1-203ENST00000594325 RIMBP3Q9UFD9 1639 aa39.3■■■■□ 3.88
CRLF1-203ENST00000594325 ERICH3Q5RHP9 1530 aa39.22■■■■□ 3.87
CRLF1-203ENST00000594325 FHAD1B1AJZ9 1412 aa39.19■■■■□ 3.86
CRLF1-203ENST00000594325 CLASP1Q7Z460 1538 aa39.17■■■■□ 3.86
CRLF1-203ENST00000594325 ADAMTS12P58397 1594 aa39.14■■■■□ 3.86
CRLF1-203ENST00000594325 GRIN2AQ12879 1464 aa39.13■■■■□ 3.85
CRLF1-203ENST00000594325 CYB5RLQ6IPT4 315 aa39.1■■■■□ 3.85
CRLF1-203ENST00000594325 KIF27Q86VH2 1401 aa39.07■■■■□ 3.85
CRLF1-203ENST00000594325 NUP160Q12769 1436 aa38.97■■■■□ 3.83
CRLF1-203ENST00000594325 ARAP1Q96P48 1450 aa38.95■■■■□ 3.83
CRLF1-203ENST00000594325 IGF1RP08069 1367 aa38.94■■■■□ 3.82
CRLF1-203ENST00000594325 CEP170Q5SW79 1584 aa38.87■■■■□ 3.81
CRLF1-203ENST00000594325 CUL7Q14999 1698 aa38.75■■■■□ 3.79
CRLF1-203ENST00000594325 CARMIL1Q5VZK9 1371 aa38.72■■■■□ 3.79
CRLF1-203ENST00000594325 JPH4Q96JJ6 628 aa38.7■■■■□ 3.79
CRLF1-203ENST00000594325 SHROOM2Q13796 1616 aa38.63■■■■□ 3.78
CRLF1-203ENST00000594325 PRG4Q92954 1404 aaPredicted RBP38.58■■■■□ 3.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms