RNA–Protein interactions for RNA: ENST00000594235.1

SIN3B-203, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 1 (best)

Gene SIN3B, Length 923 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-203ENST00000594235 SYNE4Q8N205 404 aa25.04■■□□□ 1.6
SIN3B-203ENST00000594235 RPGRQ92834 1020 aaKnown RBP25.04■■□□□ 1.6
SIN3B-203ENST00000594235 PSMD1Q99460 953 aa25.04■■□□□ 1.6
SIN3B-203ENST00000594235 IQCA1LA6NCM1 817 aa25.03■■□□□ 1.6
SIN3B-203ENST00000594235 PARP10Q53GL7 1025 aa25.03■■□□□ 1.6
SIN3B-203ENST00000594235 C3orf67Q6ZVT6 689 aa25.03■■□□□ 1.6
SIN3B-203ENST00000594235 NEUROD2Q15784 382 aa25.02■■□□□ 1.6
SIN3B-203ENST00000594235 CC2D2BQ6DHV5 1058 aa25.02■■□□□ 1.6
SIN3B-203ENST00000594235 PPP1R42Q7Z4L9 355 aa25.02■■□□□ 1.6
SIN3B-203ENST00000594235 TAF1DQ9H5J8 278 aaPredicted RBP25.02■■□□□ 1.6
SIN3B-203ENST00000594235 FZD9O00144 591 aa25.01■■□□□ 1.59
SIN3B-203ENST00000594235 CHL1O00533 1208 aa25.01■■□□□ 1.59
SIN3B-203ENST00000594235 SLC51AQ86UW1 340 aa25.01■■□□□ 1.59
SIN3B-203ENST00000594235 RUNDC1Q96C34 613 aa25.01■■□□□ 1.59
SIN3B-203ENST00000594235 CRAMP1Q96RY5 1269 aa25.01■■□□□ 1.59
SIN3B-203ENST00000594235 TRIM35Q9UPQ4 493 aa25.01■■□□□ 1.59
SIN3B-203ENST00000594235 KRT24Q2M2I5 525 aa25■■□□□ 1.59
SIN3B-203ENST00000594235 NECTIN2Q92692 538 aa25■■□□□ 1.59
SIN3B-203ENST00000594235 SCN4AP35499 1836 aa25■■□□□ 1.59
SIN3B-203ENST00000594235 WDR43Q15061 677 aaKnown RBP eCLIP24.99■■□□□ 1.59
SIN3B-203ENST00000594235 LDHDQ86WU2 507 aa24.99■■□□□ 1.59
SIN3B-203ENST00000594235 RBM17Q96I25 401 aaKnown RBP24.99■■□□□ 1.59
SIN3B-203ENST00000594235 UTP14AQ9BVJ6 771 aaKnown RBP24.99■■□□□ 1.59
SIN3B-203ENST00000594235 COL4A5P29400 1685 aa24.98■■□□□ 1.59
SIN3B-203ENST00000594235 SLC10A5Q5PT55 438 aa24.98■■□□□ 1.59
SIN3B-203ENST00000594235 COPS6Q7L5N1 327 aa24.98■■□□□ 1.59
SIN3B-203ENST00000594235 XAGE3Q8WTP9 111 aa24.98■■□□□ 1.59
SIN3B-203ENST00000594235 ADAMTS8Q9UP79 889 aa24.98■■□□□ 1.59
SIN3B-203ENST00000594235 HACL1Q9UJ83 578 aa24.97■■□□□ 1.59
SIN3B-203ENST00000594235 PPEF1O14829 653 aaPredicted RBP24.96■■□□□ 1.59
SIN3B-203ENST00000594235 AIMP1Q12904 312 aaKnown RBP24.96■■□□□ 1.59
SIN3B-203ENST00000594235 GRIPAP1Q4V328 841 aa24.96■■□□□ 1.59
SIN3B-203ENST00000594235 NLRP3Q96P20 1036 aa24.96■■□□□ 1.59
SIN3B-203ENST00000594235 DDX21Q9NR30 783 aaKnown RBP eCLIP24.96■■□□□ 1.59
SIN3B-203ENST00000594235 CREBZFQ9NS37 354 aa24.96■■□□□ 1.59
SIN3B-203ENST00000594235 RNF123Q5XPI4 1314 aa24.95■■□□□ 1.58
SIN3B-203ENST00000594235 PASKQ96RG2 1323 aa24.95■■□□□ 1.58
SIN3B-203ENST00000594235 NLRP10Q86W26 655 aa24.95■■□□□ 1.58
SIN3B-203ENST00000594235 GPC2Q8N158 579 aa24.95■■□□□ 1.58
SIN3B-203ENST00000594235 JDP2Q8WYK2 163 aa24.95■■□□□ 1.58
SIN3B-203ENST00000594235 LAS1LQ9Y4W2 734 aaKnown RBP24.95■■□□□ 1.58
SIN3B-203ENST00000594235 TCERG1O14776 1098 aaKnown RBP24.94■■□□□ 1.58
SIN3B-203ENST00000594235 EPHX2P34913 555 aa24.94■■□□□ 1.58
SIN3B-203ENST00000594235 HSP90AB3PQ58FF7 597 aa24.94■■□□□ 1.58
SIN3B-203ENST00000594235 EAPPQ56P03 285 aaPredicted RBP24.93■■□□□ 1.58
SIN3B-203ENST00000594235 CHPF2Q9P2E5 772 aa24.93■■□□□ 1.58
SIN3B-203ENST00000594235 ANKRD36CQ5JPF3 1778 aa24.93■■□□□ 1.58
SIN3B-203ENST00000594235 ABCC4O15439 1325 aa24.92■■□□□ 1.58
SIN3B-203ENST00000594235 TCIRG1Q13488 830 aa24.92■■□□□ 1.58
SIN3B-203ENST00000594235 PRKRIP1Q9H875 184 aaPredicted RBP24.92■■□□□ 1.58
SIN3B-203ENST00000594235 ADAMTSL1Q8N6G6 1762 aa24.92■■□□□ 1.58
SIN3B-203ENST00000594235 ITGBL1O95965 494 aaPredicted RBP24.91■■□□□ 1.58
SIN3B-203ENST00000594235 HOXB7P09629 217 aa24.91■■□□□ 1.58
SIN3B-203ENST00000594235 COL13A1Q5TAT6 717 aaPredicted RBP24.91■■□□□ 1.58
SIN3B-203ENST00000594235 HDGFL1Q5TGJ6 251 aa24.91■■□□□ 1.58
SIN3B-203ENST00000594235 LARGE2Q8N3Y3 721 aa24.91■■□□□ 1.58
SIN3B-203ENST00000594235 ATP6V0A2Q9Y487 856 aa24.91■■□□□ 1.58
SIN3B-203ENST00000594235 HCLS1P14317 486 aaPredicted RBP24.9■■□□□ 1.58
SIN3B-203ENST00000594235 EIF6P56537 245 aaKnown RBP24.9■■□□□ 1.58
SIN3B-203ENST00000594235 PNMA8AQ86V59 439 aaPredicted RBP24.9■■□□□ 1.58
SIN3B-203ENST00000594235 HSPA1AP0DMV8 641 aaKnown RBP24.89■■□□□ 1.58
SIN3B-203ENST00000594235 HSPA1BP0DMV9 641 aaKnown RBP24.89■■□□□ 1.58
SIN3B-203ENST00000594235 CFAP44Q96MT7 982 aa24.89■■□□□ 1.58
SIN3B-203ENST00000594235 MKRN1Q9UHC7 482 aaKnown RBP24.89■■□□□ 1.58
SIN3B-203ENST00000594235 TRMT112Q9UI30 125 aaKnown RBP24.89■■□□□ 1.58
SIN3B-203ENST00000594235 CLEC11AQ9Y240 323 aa24.88■■□□□ 1.57
SIN3B-203ENST00000594235 GJA3Q9Y6H8 435 aa24.88■■□□□ 1.57
SIN3B-203ENST00000594235 SH3TC1Q8TE82 1336 aa24.87■■□□□ 1.57
SIN3B-203ENST00000594235 LAMB2P55268 1798 aa24.87■■□□□ 1.57
SIN3B-203ENST00000594235 LTBP1Q14766 1721 aa24.86■■□□□ 1.57
SIN3B-203ENST00000594235 CNTNAP1P78357 1384 aa24.86■■□□□ 1.57
SIN3B-203ENST00000594235 PPIP5K2O43314 1243 aa24.86■■□□□ 1.57
SIN3B-203ENST00000594235 BBOX1O75936 387 aa24.86■■□□□ 1.57
SIN3B-203ENST00000594235 SCNN1DP51172 638 aa24.86■■□□□ 1.57
SIN3B-203ENST00000594235 NIM1KQ8IY84 436 aa24.86■■□□□ 1.57
SIN3B-203ENST00000594235 PLBD2Q8NHP8 589 aa24.86■■□□□ 1.57
SIN3B-203ENST00000594235 RTFDC1Q9BY42 306 aaPredicted RBP24.86■■□□□ 1.57
SIN3B-203ENST00000594235 TMX4Q9H1E5 349 aaPredicted RBP24.86■■□□□ 1.57
SIN3B-203ENST00000594235 MBIPQ9NS73 344 aa24.86■■□□□ 1.57
SIN3B-203ENST00000594235 DBF4Q9UBU7 674 aaPredicted RBP24.86■■□□□ 1.57
SIN3B-203ENST00000594235 AOC3Q16853 763 aa24.85■■□□□ 1.57
SIN3B-203ENST00000594235 DUSP27Q5VZP5 1158 aa24.85■■□□□ 1.57
SIN3B-203ENST00000594235 MAP1SQ66K74 1059 aaPredicted RBP24.85■■□□□ 1.57
SIN3B-203ENST00000594235 TMEM88BA6NKF7 163 aa24.84■■□□□ 1.57
SIN3B-203ENST00000594235 ZNF853P0CG23 659 aa24.84■■□□□ 1.57
SIN3B-203ENST00000594235 ANKRD13DQ6ZTN6 518 aa24.84■■□□□ 1.57
SIN3B-203ENST00000594235 SP8Q8IXZ3 490 aa24.84■■□□□ 1.57
SIN3B-203ENST00000594235 CNTROBQ8N137 903 aa24.84■■□□□ 1.57
SIN3B-203ENST00000594235 ZNF428Q96B54 188 aa24.84■■□□□ 1.57
SIN3B-203ENST00000594235 ISCA1Q9BUE6 129 aa24.84■■□□□ 1.57
SIN3B-203ENST00000594235 VPS33BQ9H267 617 aa24.84■■□□□ 1.57
SIN3B-203ENST00000594235 LMOD1P29536 600 aaPredicted RBP24.83■■□□□ 1.57
SIN3B-203ENST00000594235 EPS15P42566 896 aa24.83■■□□□ 1.57
SIN3B-203ENST00000594235 GRAPQ13588 217 aa24.83■■□□□ 1.57
SIN3B-203ENST00000594235 DDX46Q7L014 1031 aaKnown RBP24.83■■□□□ 1.57
SIN3B-203ENST00000594235 GRAPLQ8TC17 118 aaPredicted RBP24.83■■□□□ 1.57
SIN3B-203ENST00000594235 APAF1O14727 1248 aa24.82■■□□□ 1.56
SIN3B-203ENST00000594235 DPP8Q6V1X1 898 aaPredicted RBP24.82■■□□□ 1.56
SIN3B-203ENST00000594235 SUPT20HQ8NEM7 779 aa24.82■■□□□ 1.56
SIN3B-203ENST00000594235 HYPKQ9NX55 129 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms