RNA–Protein interactions for RNA: ENST00000593959.1

SYMPK-204, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-204ENST00000593959 RNF123Q5XPI4 1314 aa21.49■■□□□ 1.03
SYMPK-204ENST00000593959 APAF1O14727 1248 aa21.48■■□□□ 1.03
SYMPK-204ENST00000593959 PPP1R42Q7Z4L9 355 aa21.48■■□□□ 1.03
SYMPK-204ENST00000593959 DNAJC5GQ8N7S2 189 aa21.48■■□□□ 1.03
SYMPK-204ENST00000593959 XAGE3Q8WTP9 111 aa21.48■■□□□ 1.03
SYMPK-204ENST00000593959 WDR90Q96KV7 1748 aa21.48■■□□□ 1.03
SYMPK-204ENST00000593959 HSP90AB3PQ58FF7 597 aa21.47■■□□□ 1.03
SYMPK-204ENST00000593959 CC2D2BQ6DHV5 1058 aa21.47■■□□□ 1.03
SYMPK-204ENST00000593959 OLFM4Q6UX06 510 aa21.47■■□□□ 1.03
SYMPK-204ENST00000593959 CRAMP1Q96RY5 1269 aa21.47■■□□□ 1.03
SYMPK-204ENST00000593959 MBIPQ9NS73 344 aa21.47■■□□□ 1.03
SYMPK-204ENST00000593959 TCIRG1Q13488 830 aa21.46■■□□□ 1.03
SYMPK-204ENST00000593959 NECTIN2Q92692 538 aa21.46■■□□□ 1.03
SYMPK-204ENST00000593959 PSMD1Q99460 953 aa21.46■■□□□ 1.03
SYMPK-204ENST00000593959 UTP14AQ9BVJ6 771 aaKnown RBP21.46■■□□□ 1.03
SYMPK-204ENST00000593959 IFT57Q9NWB7 429 aa21.46■■□□□ 1.03
SYMPK-204ENST00000593959 LAS1LQ9Y4W2 734 aaKnown RBP21.46■■□□□ 1.03
SYMPK-204ENST00000593959 CACNA1SQ13698 1873 aa21.45■■□□□ 1.02
SYMPK-204ENST00000593959 GRIPAP1Q4V328 841 aa21.45■■□□□ 1.02
SYMPK-204ENST00000593959 HDGFL1Q5TGJ6 251 aa21.45■■□□□ 1.02
SYMPK-204ENST00000593959 C3orf67Q6ZVT6 689 aa21.45■■□□□ 1.02
SYMPK-204ENST00000593959 NLRP10Q86W26 655 aa21.45■■□□□ 1.02
SYMPK-204ENST00000593959 SMC1BQ8NDV3 1235 aa21.45■■□□□ 1.02
SYMPK-204ENST00000593959 CHPF2Q9P2E5 772 aa21.45■■□□□ 1.02
SYMPK-204ENST00000593959 DBF4Q9UBU7 674 aaPredicted RBP21.45■■□□□ 1.02
SYMPK-204ENST00000593959 CALD1Q05682 793 aaKnown RBP21.44■■□□□ 1.02
SYMPK-204ENST00000593959 DUSP27Q5VZP5 1158 aa21.44■■□□□ 1.02
SYMPK-204ENST00000593959 GNAI1P63096 354 aa21.43■■□□□ 1.02
SYMPK-204ENST00000593959 AIMP1Q12904 312 aaKnown RBP21.43■■□□□ 1.02
SYMPK-204ENST00000593959 CCDC184Q52MB2 194 aa21.43■■□□□ 1.02
SYMPK-204ENST00000593959 RPGRQ92834 1020 aaKnown RBP21.43■■□□□ 1.02
SYMPK-204ENST00000593959 L3MBTL3Q96JM7 780 aaPredicted RBP21.43■■□□□ 1.02
SYMPK-204ENST00000593959 DDNO94850 711 aaPredicted RBP21.42■■□□□ 1.02
SYMPK-204ENST00000593959 PLBD2Q8NHP8 589 aa21.42■■□□□ 1.02
SYMPK-204ENST00000593959 RBM17Q96I25 401 aaKnown RBP21.42■■□□□ 1.02
SYMPK-204ENST00000593959 NLRP3Q96P20 1036 aa21.42■■□□□ 1.02
SYMPK-204ENST00000593959 ZNF277Q9NRM2 450 aaPredicted RBP21.42■■□□□ 1.02
SYMPK-204ENST00000593959 ANKRD13DQ6ZTN6 518 aa21.41■■□□□ 1.02
SYMPK-204ENST00000593959 SYNE4Q8N205 404 aa21.41■■□□□ 1.02
SYMPK-204ENST00000593959 HYPKQ9NX55 129 aa21.41■■□□□ 1.02
SYMPK-204ENST00000593959 FZD9O00144 591 aa21.4■■□□□ 1.02
SYMPK-204ENST00000593959 IARSP41252 1262 aaKnown RBP21.4■■□□□ 1.02
SYMPK-204ENST00000593959 NCBP3Q53F19 620 aaKnown RBP21.4■■□□□ 1.02
SYMPK-204ENST00000593959 ISCA1Q9BUE6 129 aa21.4■■□□□ 1.02
SYMPK-204ENST00000593959 ANKRD36CQ5JPF3 1778 aa21.4■■□□□ 1.02
SYMPK-204ENST00000593959 TRIM28Q13263 835 aaKnown RBP21.39■■□□□ 1.01
SYMPK-204ENST00000593959 CCDC27Q2M243 656 aa21.39■■□□□ 1.01
SYMPK-204ENST00000593959 PCNTO95613 3336 aa21.39■■□□□ 1.01
SYMPK-204ENST00000593959 SH3TC1Q8TE82 1336 aa21.37■■□□□ 1.01
SYMPK-204ENST00000593959 PPEF1O14829 653 aaPredicted RBP21.37■■□□□ 1.01
SYMPK-204ENST00000593959 TRMT112Q9UI30 125 aaKnown RBP21.37■■□□□ 1.01
SYMPK-204ENST00000593959 ATP6V0A2Q9Y487 856 aa21.37■■□□□ 1.01
SYMPK-204ENST00000593959 ZNF541Q9H0D2 1346 aa21.36■■□□□ 1.01
SYMPK-204ENST00000593959 IQCA1LA6NCM1 817 aa21.36■■□□□ 1.01
SYMPK-204ENST00000593959 BBOX1O75936 387 aa21.36■■□□□ 1.01
SYMPK-204ENST00000593959 C8orf58Q8NAV2 365 aa21.36■■□□□ 1.01
SYMPK-204ENST00000593959 ABCC4O15439 1325 aa21.35■■□□□ 1.01
SYMPK-204ENST00000593959 HCLS1P14317 486 aaPredicted RBP21.35■■□□□ 1.01
SYMPK-204ENST00000593959 SLC51AQ86UW1 340 aa21.35■■□□□ 1.01
SYMPK-204ENST00000593959 RTFDC1Q9BY42 306 aaPredicted RBP21.35■■□□□ 1.01
SYMPK-204ENST00000593959 VPS33BQ9H267 617 aa21.35■■□□□ 1.01
SYMPK-204ENST00000593959 COL4A5P29400 1685 aa21.34■■□□□ 1.01
SYMPK-204ENST00000593959 TAF1DQ9H5J8 278 aaPredicted RBP21.34■■□□□ 1.01
SYMPK-204ENST00000593959 HTRA3P83110 453 aa21.33■■□□□ 1.01
SYMPK-204ENST00000593959 CHADLQ6NUI6 762 aa21.33■■□□□ 1.01
SYMPK-204ENST00000593959 SP8Q8IXZ3 490 aa21.33■■□□□ 1.01
SYMPK-204ENST00000593959 GPC2Q8N158 579 aa21.33■■□□□ 1.01
SYMPK-204ENST00000593959 KLRG1Q96E93 195 aa21.33■■□□□ 1.01
SYMPK-204ENST00000593959 CHMP4AQ9BY43 222 aa21.33■■□□□ 1.01
SYMPK-204ENST00000593959 SCN4AP35499 1836 aa21.33■■□□□ 1.01
SYMPK-204ENST00000593959 POTEIP0CG38 1075 aa21.32■■□□□ 1
SYMPK-204ENST00000593959 POTEJP0CG39 1038 aa21.32■■□□□ 1
SYMPK-204ENST00000593959 SF3B3Q15393 1217 aaKnown RBP21.32■■□□□ 1
SYMPK-204ENST00000593959 WWC1Q8IX03 1113 aa21.32■■□□□ 1
SYMPK-204ENST00000593959 JMYQ8N9B5 988 aa21.32■■□□□ 1
SYMPK-204ENST00000593959 JDP2Q8WYK2 163 aa21.32■■□□□ 1
SYMPK-204ENST00000593959 ELL2O00472 640 aaPredicted RBP21.31■■□□□ 1
SYMPK-204ENST00000593959 PHAXQ9H814 394 aaKnown RBP21.31■■□□□ 1
SYMPK-204ENST00000593959 LAMB2P55268 1798 aa21.31■■□□□ 1
SYMPK-204ENST00000593959 IL16Q14005 1332 aa21.3■■□□□ 1
SYMPK-204ENST00000593959 ATP5J2-PTCD1G3V325 749 aa21.3■■□□□ 1
SYMPK-204ENST00000593959 GRAPQ13588 217 aa21.3■■□□□ 1
SYMPK-204ENST00000593959 GRAPLQ8TC17 118 aaPredicted RBP21.3■■□□□ 1
SYMPK-204ENST00000593959 FAM89AQ96GI7 184 aa21.3■■□□□ 1
SYMPK-204ENST00000593959 DDX46Q7L014 1031 aaKnown RBP21.29■■□□□ 1
SYMPK-204ENST00000593959 TMC4Q7Z404 712 aa21.29■■□□□ 1
SYMPK-204ENST00000593959 LDHDQ86WU2 507 aa21.29■■□□□ 1
SYMPK-204ENST00000593959 TSPYL6Q8N831 410 aa21.29■■□□□ 1
SYMPK-204ENST00000593959 HACL1Q9UJ83 578 aa21.29■■□□□ 1
SYMPK-204ENST00000593959 TCERG1O14776 1098 aaKnown RBP21.28■■□□□ 1
SYMPK-204ENST00000593959 GOLGA2Q08379 1002 aa21.28■■□□□ 1
SYMPK-204ENST00000593959 CCDC30Q5VVM6 783 aa21.28■■□□□ 1
SYMPK-204ENST00000593959 LARGE2Q8N3Y3 721 aa21.28■■□□□ 1
SYMPK-204ENST00000593959 TMX4Q9H1E5 349 aaPredicted RBP21.28■■□□□ 1
SYMPK-204ENST00000593959 DDX60Q8IY21 1712 aaKnown RBP21.27■■□□□ 1
SYMPK-204ENST00000593959 ANP32CO43423 234 aa21.27■■□□□ 1
SYMPK-204ENST00000593959 RIC3Q7Z5B4 369 aa21.27■■□□□ 1
SYMPK-204ENST00000593959 MIER1Q8N108 512 aa21.27■■□□□ 1
SYMPK-204ENST00000593959 SUPT20HQ8NEM7 779 aa21.27■■□□□ 1
SYMPK-204ENST00000593959 MRS2Q9HD23 443 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms