RNA–Protein interactions for RNA: ENST00000593818.5

IRF3-206, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 924 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-206ENST00000593818 USP50Q70EL3 339 aaPredicted RBP16.47■□□□□ 0.23
IRF3-206ENST00000593818 NPM2Q86SE8 214 aaKnown RBP16.47■□□□□ 0.23
IRF3-206ENST00000593818 JDP2Q8WYK2 163 aa16.47■□□□□ 0.23
IRF3-206ENST00000593818 HHIPL1Q96JK4 782 aa16.47■□□□□ 0.23
IRF3-206ENST00000593818 ZNF652Q9Y2D9 606 aa16.47■□□□□ 0.23
IRF3-206ENST00000593818 RIC1Q4ADV7 1423 aa16.46■□□□□ 0.23
IRF3-206ENST00000593818 TRAF5O00463 557 aa16.46■□□□□ 0.23
IRF3-206ENST00000593818 LMOD1P29536 600 aaPredicted RBP16.46■□□□□ 0.23
IRF3-206ENST00000593818 ALDH1B1P30837 517 aa16.46■□□□□ 0.23
IRF3-206ENST00000593818 BRPF1P55201 1214 aaPredicted RBP16.46■□□□□ 0.23
IRF3-206ENST00000593818 PAXIP1Q6ZW49 1069 aaPredicted RBP16.46■□□□□ 0.23
IRF3-206ENST00000593818 SAPCD2Q86UD0 394 aa16.46■□□□□ 0.23
IRF3-206ENST00000593818 NUP98P52948 1817 aa16.45■□□□□ 0.22
IRF3-206ENST00000593818 AOC2O75106 756 aa16.45■□□□□ 0.22
IRF3-206ENST00000593818 EPS15P42566 896 aa16.45■□□□□ 0.22
IRF3-206ENST00000593818 EIF6P56537 245 aaKnown RBP16.45■□□□□ 0.22
IRF3-206ENST00000593818 CC2D2BQ6DHV5 1058 aa16.45■□□□□ 0.22
IRF3-206ENST00000593818 TPTE2Q6XPS3 522 aa16.45■□□□□ 0.22
IRF3-206ENST00000593818 GNAT3A8MTJ3 354 aa16.44■□□□□ 0.22
IRF3-206ENST00000593818 ABCC12Q96J65 1359 aa16.43■□□□□ 0.22
IRF3-206ENST00000593818 U2SURPO15042 1029 aaKnown RBP16.43■□□□□ 0.22
IRF3-206ENST00000593818 GRM1Q13255 1194 aa16.43■□□□□ 0.22
IRF3-206ENST00000593818 MIER1Q8N108 512 aa16.43■□□□□ 0.22
IRF3-206ENST00000593818 GAS2L2Q8NHY3 880 aa16.43■□□□□ 0.22
IRF3-206ENST00000593818 NIP7Q9Y221 180 aaKnown RBP eCLIP16.43■□□□□ 0.22
IRF3-206ENST00000593818 USP16Q9Y5T5 823 aa16.43■□□□□ 0.22
IRF3-206ENST00000593818 GJA3Q9Y6H8 435 aa16.43■□□□□ 0.22
IRF3-206ENST00000593818 KCNQ3O43525 872 aa16.42■□□□□ 0.22
IRF3-206ENST00000593818 GRIPAP1Q4V328 841 aa16.42■□□□□ 0.22
IRF3-206ENST00000593818 PIP4K2AP48426 406 aaPredicted RBP16.41■□□□□ 0.22
IRF3-206ENST00000593818 DGKZQ13574 1117 aa16.41■□□□□ 0.22
IRF3-206ENST00000593818 IBTKQ9P2D0 1353 aaPredicted RBP16.4■□□□□ 0.22
IRF3-206ENST00000593818 NBPF26B4DH59 902 aa16.4■□□□□ 0.22
IRF3-206ENST00000593818 HOXA10P31260 410 aaPredicted RBP16.4■□□□□ 0.22
IRF3-206ENST00000593818 NBPF10Q6P3W6 841 aaKnown RBP16.4■□□□□ 0.22
IRF3-206ENST00000593818 NBPF15Q8N660 670 aa16.4■□□□□ 0.22
IRF3-206ENST00000593818 CFAP44Q96MT7 982 aa16.4■□□□□ 0.22
IRF3-206ENST00000593818 MRS2Q9HD23 443 aa16.4■□□□□ 0.22
IRF3-206ENST00000593818 ADARB2Q9NS39 739 aaKnown RBP16.4■□□□□ 0.22
IRF3-206ENST00000593818 GPRC5DQ9NZD1 345 aa16.4■□□□□ 0.22
IRF3-206ENST00000593818 PGAP2Q9UHJ9 254 aa16.4■□□□□ 0.22
IRF3-206ENST00000593818 NUDCQ9Y266 331 aa16.4■□□□□ 0.22
IRF3-206ENST00000593818 PRAMEF22A3QJZ6 481 aa16.39■□□□□ 0.21
IRF3-206ENST00000593818 BTBD11A6QL63 1104 aa16.39■□□□□ 0.21
IRF3-206ENST00000593818 CELF2O95319 508 aaKnown RBP16.39■□□□□ 0.21
IRF3-206ENST00000593818 LARGE2Q8N3Y3 721 aa16.39■□□□□ 0.21
IRF3-206ENST00000593818 U2AF1L5P0DN76 240 aaPredicted RBP16.38■□□□□ 0.21
IRF3-206ENST00000593818 U2AF1Q01081 240 aaKnown RBP eCLIP16.38■□□□□ 0.21
IRF3-206ENST00000593818 CIAPIN1Q6FI81 312 aa16.38■□□□□ 0.21
IRF3-206ENST00000593818 AKAP11Q9UKA4 1901 aa16.38■□□□□ 0.21
IRF3-206ENST00000593818 CDHR2Q9BYE9 1310 aa16.38■□□□□ 0.21
IRF3-206ENST00000593818 SNRPA1P09661 255 aaKnown RBP16.37■□□□□ 0.21
IRF3-206ENST00000593818 NOGQ13253 232 aa16.37■□□□□ 0.21
IRF3-206ENST00000593818 HLFQ16534 295 aa16.37■□□□□ 0.21
IRF3-206ENST00000593818 PRPF38BQ5VTL8 546 aaKnown RBP16.36■□□□□ 0.21
IRF3-206ENST00000593818 NIM1KQ8IY84 436 aa16.36■□□□□ 0.21
IRF3-206ENST00000593818 GLIS2Q9BZE0 524 aaPredicted RBP16.36■□□□□ 0.21
IRF3-206ENST00000593818 NYXQ9GZU5 481 aa16.36■□□□□ 0.21
IRF3-206ENST00000593818 RSPH6AQ9H0K4 717 aa16.36■□□□□ 0.21
IRF3-206ENST00000593818 FAM177BA6PVY3 158 aa16.35■□□□□ 0.21
IRF3-206ENST00000593818 WDR43Q15061 677 aaKnown RBP eCLIP16.35■□□□□ 0.21
IRF3-206ENST00000593818 SLC51AQ86UW1 340 aa16.35■□□□□ 0.21
IRF3-206ENST00000593818 ZC3H15Q8WU90 426 aaKnown RBP16.35■□□□□ 0.21
IRF3-206ENST00000593818 CRAMP1Q96RY5 1269 aa16.35■□□□□ 0.21
IRF3-206ENST00000593818 VPS33BQ9H267 617 aa16.35■□□□□ 0.21
IRF3-206ENST00000593818 LAMB2P55268 1798 aa16.34■□□□□ 0.21
IRF3-206ENST00000593818 KDM3BQ7LBC6 1761 aa16.34■□□□□ 0.21
IRF3-206ENST00000593818 CCER2I3L3R5 266 aa16.34■□□□□ 0.21
IRF3-206ENST00000593818 PRKAR2BP31323 418 aa16.34■□□□□ 0.21
IRF3-206ENST00000593818 ZIC5Q96T25 663 aa16.34■□□□□ 0.21
IRF3-206ENST00000593818 SAGE1Q9NXZ1 904 aa16.34■□□□□ 0.21
IRF3-206ENST00000593818 ANKRD36CQ5JPF3 1778 aa16.33■□□□□ 0.21
IRF3-206ENST00000593818 DLG5Q8TDM6 1919 aa16.33■□□□□ 0.21
IRF3-206ENST00000593818 PPEF1O14829 653 aaPredicted RBP16.33■□□□□ 0.2
IRF3-206ENST00000593818 GTF2E1P29083 439 aaPredicted RBP16.33■□□□□ 0.2
IRF3-206ENST00000593818 NUTM1Q86Y26 1132 aa16.33■□□□□ 0.2
IRF3-206ENST00000593818 PNISRQ8TF01 805 aaKnown RBP16.33■□□□□ 0.2
IRF3-206ENST00000593818 RPGRQ92834 1020 aaKnown RBP16.33■□□□□ 0.2
IRF3-206ENST00000593818 ADAMTS8Q9UP79 889 aa16.33■□□□□ 0.2
IRF3-206ENST00000593818 POLR2AP24928 1970 aaKnown RBP16.33■□□□□ 0.2
IRF3-206ENST00000593818 ERVV-1B6SEH8 477 aa16.32■□□□□ 0.2
IRF3-206ENST00000593818 PPIP5K2O43314 1243 aa16.32■□□□□ 0.2
IRF3-206ENST00000593818 SOX10P56693 466 aa16.32■□□□□ 0.2
IRF3-206ENST00000593818 CXCL9Q07325 125 aa16.32■□□□□ 0.2
IRF3-206ENST00000593818 PHACTR3Q96KR7 559 aa16.32■□□□□ 0.2
IRF3-206ENST00000593818 ZNRF3Q9ULT6 936 aa16.32■□□□□ 0.2
IRF3-206ENST00000593818 LRRC37AA6NMS7 1700 aa16.31■□□□□ 0.2
IRF3-206ENST00000593818 UBN2Q6ZU65 1347 aa16.31■□□□□ 0.2
IRF3-206ENST00000593818 FAM155AB1AL88 458 aaPredicted RBP16.31■□□□□ 0.2
IRF3-206ENST00000593818 GMPSP49915 693 aaPredicted RBP16.31■□□□□ 0.2
IRF3-206ENST00000593818 HIRAP54198 1017 aaPredicted RBP16.31■□□□□ 0.2
IRF3-206ENST00000593818 AOC3Q16853 763 aa16.31■□□□□ 0.2
IRF3-206ENST00000593818 CDC37L1Q7L3B6 337 aa16.31■□□□□ 0.2
IRF3-206ENST00000593818 RTFDC1Q9BY42 306 aaPredicted RBP16.31■□□□□ 0.2
IRF3-206ENST00000593818 DUOX1Q9NRD9 1551 aa16.3■□□□□ 0.2
IRF3-206ENST00000593818 RBM17Q96I25 401 aaKnown RBP16.3■□□□□ 0.2
IRF3-206ENST00000593818 MAP3K15Q6ZN16 1313 aa16.29■□□□□ 0.2
IRF3-206ENST00000593818 CCDC146Q8IYE0 955 aa16.29■□□□□ 0.2
IRF3-206ENST00000593818 TRPM4Q8TD43 1214 aa16.29■□□□□ 0.2
IRF3-206ENST00000593818 PLEKHF1Q96S99 279 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms