RNA–Protein interactions for RNA: ENST00000593209.5

GHDC-212, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-212ENST00000593209 COL15A1P39059 1388 aa23.22■■□□□ 1.31
GHDC-212ENST00000593209 TXNRD1Q16881 649 aa23.22■■□□□ 1.31
GHDC-212ENST00000593209 KIF1BPQ96EK5 621 aa23.22■■□□□ 1.31
GHDC-212ENST00000593209 PA2G4Q9UQ80 394 aaKnown RBP23.22■■□□□ 1.31
GHDC-212ENST00000593209 HDAC5Q9UQL6 1122 aa23.22■■□□□ 1.31
GHDC-212ENST00000593209 RGPD3A6NKT7 1758 aaPredicted RBP23.21■■□□□ 1.31
GHDC-212ENST00000593209 RGPD4Q7Z3J3 1758 aa23.21■■□□□ 1.31
GHDC-212ENST00000593209 AOX1Q06278 1338 aa23.21■■□□□ 1.31
GHDC-212ENST00000593209 CASP7P55210 303 aa23.21■■□□□ 1.31
GHDC-212ENST00000593209 TEX13AQ9BXU3 409 aaPredicted RBP23.21■■□□□ 1.31
GHDC-212ENST00000593209 RREB1Q92766 1687 aa23.21■■□□□ 1.31
GHDC-212ENST00000593209 ANKRD36CQ5JPF3 1778 aa23.2■■□□□ 1.31
GHDC-212ENST00000593209 ZNF831Q5JPB2 1677 aa23.2■■□□□ 1.3
GHDC-212ENST00000593209 ATP5J2-PTCD1G3V325 749 aa23.2■■□□□ 1.3
GHDC-212ENST00000593209 ATP6V1AP38606 617 aa23.2■■□□□ 1.3
GHDC-212ENST00000593209 NUTM1Q86Y26 1132 aa23.2■■□□□ 1.3
GHDC-212ENST00000593209 KIF2CQ99661 725 aa23.2■■□□□ 1.3
GHDC-212ENST00000593209 TBC1D2Q9BYX2 928 aa23.2■■□□□ 1.3
GHDC-212ENST00000593209 CICQ96RK0 1608 aaPredicted RBP23.2■■□□□ 1.3
GHDC-212ENST00000593209 ITPK1Q13572 414 aa23.19■■□□□ 1.3
GHDC-212ENST00000593209 MYH14Q7Z406 1995 aaKnown RBP23.19■■□□□ 1.3
GHDC-212ENST00000593209 CYP19A1P11511 503 aaPredicted RBP23.19■■□□□ 1.3
GHDC-212ENST00000593209 JARID2Q92833 1246 aaPredicted RBP23.19■■□□□ 1.3
GHDC-212ENST00000593209 LRRC4BQ9NT99 713 aa23.19■■□□□ 1.3
GHDC-212ENST00000593209 HSP90AB4PQ58FF6 505 aa23.18■■□□□ 1.3
GHDC-212ENST00000593209 COL5A3P25940 1745 aaPredicted RBP23.18■■□□□ 1.3
GHDC-212ENST00000593209 STARD3NLO95772 234 aa23.17■■□□□ 1.3
GHDC-212ENST00000593209 PI4K2BQ8TCG2 481 aa23.17■■□□□ 1.3
GHDC-212ENST00000593209 CCNL1Q9UK58 526 aaPredicted RBP23.17■■□□□ 1.3
GHDC-212ENST00000593209 DAXXQ9UER7 740 aaPredicted RBP23.17■■□□□ 1.3
GHDC-212ENST00000593209 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.17■■□□□ 1.3
GHDC-212ENST00000593209 USP42Q9H9J4 1324 aaKnown RBP23.17■■□□□ 1.3
GHDC-212ENST00000593209 BECN1Q14457 450 aa23.16■■□□□ 1.3
GHDC-212ENST00000593209 UBE3BQ7Z3V4 1068 aa23.16■■□□□ 1.3
GHDC-212ENST00000593209 RABL6Q3YEC7 729 aaPredicted RBP23.15■■□□□ 1.3
GHDC-212ENST00000593209 TAF1LQ8IZX4 1826 aa23.15■■□□□ 1.3
GHDC-212ENST00000593209 RFX5P48382 616 aaPredicted RBP23.15■■□□□ 1.3
GHDC-212ENST00000593209 ZBTB3Q9H5J0 574 aa23.15■■□□□ 1.3
GHDC-212ENST00000593209 NUP98P52948 1817 aa23.14■■□□□ 1.29
GHDC-212ENST00000593209 A0A087WZG4 1122 aa23.14■■□□□ 1.29
GHDC-212ENST00000593209 SASH1O94885 1247 aa23.14■■□□□ 1.29
GHDC-212ENST00000593209 H7C1W4 665 aa23.13■■□□□ 1.29
GHDC-212ENST00000593209 OS9Q13438 667 aaPredicted RBP23.12■■□□□ 1.29
GHDC-212ENST00000593209 KLHDC4Q8TBB5 520 aa23.12■■□□□ 1.29
GHDC-212ENST00000593209 USP26Q9BXU7 913 aa23.12■■□□□ 1.29
GHDC-212ENST00000593209 ZBTB1Q9Y2K1 713 aa23.12■■□□□ 1.29
GHDC-212ENST00000593209 RTL5Q5HYW3 569 aaPredicted RBP23.12■■□□□ 1.29
GHDC-212ENST00000593209 INTS5Q6P9B9 1019 aaKnown RBP23.12■■□□□ 1.29
GHDC-212ENST00000593209 ERC1Q8IUD2 1116 aa23.12■■□□□ 1.29
GHDC-212ENST00000593209 LINC00116Q8NCU8 138 aa23.12■■□□□ 1.29
GHDC-212ENST00000593209 CRKLP46109 303 aaKnown RBP23.11■■□□□ 1.29
GHDC-212ENST00000593209 SLC27A3Q5K4L6 730 aa23.1■■□□□ 1.29
GHDC-212ENST00000593209 ISCA1Q9BUE6 129 aa23.1■■□□□ 1.29
GHDC-212ENST00000593209 CWC25Q9NXE8 425 aaPredicted RBP23.1■■□□□ 1.29
GHDC-212ENST00000593209 FOXO4P98177 505 aa23.1■■□□□ 1.29
GHDC-212ENST00000593209 ANO8Q9HCE9 1232 aaPredicted RBP23.1■■□□□ 1.29
GHDC-212ENST00000593209 CHMLP26374 656 aa23.09■■□□□ 1.29
GHDC-212ENST00000593209 CASC1Q6TDU7 716 aa23.09■■□□□ 1.29
GHDC-212ENST00000593209 COPRSQ9NQ92 184 aa23.09■■□□□ 1.29
GHDC-212ENST00000593209 CCDC87Q9NVE4 849 aa23.09■■□□□ 1.29
GHDC-212ENST00000593209 TTC41PQ6P2S7 1318 aa23.09■■□□□ 1.29
GHDC-212ENST00000593209 PTPN12Q05209 780 aaKnown RBP23.08■■□□□ 1.29
GHDC-212ENST00000593209 NBR1Q14596 966 aa23.08■■□□□ 1.29
GHDC-212ENST00000593209 TRIM6-TRIM34B2RNG4 842 aa23.08■■□□□ 1.28
GHDC-212ENST00000593209 ERC2O15083 957 aa23.08■■□□□ 1.28
GHDC-212ENST00000593209 EIF5BO60841 1220 aaKnown RBP23.08■■□□□ 1.28
GHDC-212ENST00000593209 CLASRPQ8N2M8 674 aaKnown RBP23.08■■□□□ 1.28
GHDC-212ENST00000593209 CCDC191Q8NCU4 936 aa23.08■■□□□ 1.28
GHDC-212ENST00000593209 SNX21Q969T3 373 aa23.08■■□□□ 1.28
GHDC-212ENST00000593209 RILPL2Q969X0 211 aa23.08■■□□□ 1.28
GHDC-212ENST00000593209 ESYT1Q9BSJ8 1104 aa23.08■■□□□ 1.28
GHDC-212ENST00000593209 SIL1Q9H173 461 aa23.08■■□□□ 1.28
GHDC-212ENST00000593209 G3BP1Q13283 466 aaKnown RBP eCLIP23.07■■□□□ 1.28
GHDC-212ENST00000593209 ANTXR1Q9H6X2 564 aa23.07■■□□□ 1.28
GHDC-212ENST00000593209 ZNF330Q9Y3S2 320 aaPredicted RBP23.07■■□□□ 1.28
GHDC-212ENST00000593209 MYH3P11055 1940 aa23.06■■□□□ 1.28
GHDC-212ENST00000593209 MAP4K4O95819 1239 aaPredicted RBP23.06■■□□□ 1.28
GHDC-212ENST00000593209 ZNF827Q17R98 1081 aa23.06■■□□□ 1.28
GHDC-212ENST00000593209 EAF2Q96CJ1 260 aaPredicted RBP23.06■■□□□ 1.28
GHDC-212ENST00000593209 C4BP0C0L5 1744 aa23.06■■□□□ 1.28
GHDC-212ENST00000593209 CD2BP2O95400 341 aaKnown RBP23.05■■□□□ 1.28
GHDC-212ENST00000593209 TCIRG1Q13488 830 aa23.05■■□□□ 1.28
GHDC-212ENST00000593209 PSDA5PKW4 1024 aaPredicted RBP23.05■■□□□ 1.28
GHDC-212ENST00000593209 IL6STP40189 918 aaPredicted RBP23.05■■□□□ 1.28
GHDC-212ENST00000593209 AACSQ86V21 672 aa23.05■■□□□ 1.28
GHDC-212ENST00000593209 IL25Q9H293 177 aa23.05■■□□□ 1.28
GHDC-212ENST00000593209 TLR7Q9NYK1 1049 aaKnown RBP23.05■■□□□ 1.28
GHDC-212ENST00000593209 MAP3K15Q6ZN16 1313 aa23.05■■□□□ 1.28
GHDC-212ENST00000593209 EIF5P55010 431 aaKnown RBP23.04■■□□□ 1.28
GHDC-212ENST00000593209 LMBR1LQ6UX01 489 aa23.04■■□□□ 1.28
GHDC-212ENST00000593209 SMIM5Q71RC9 77 aa23.04■■□□□ 1.28
GHDC-212ENST00000593209 CNTNAP4Q9C0A0 1308 aa23.04■■□□□ 1.28
GHDC-212ENST00000593209 REC8O95072 547 aa23.03■■□□□ 1.28
GHDC-212ENST00000593209 ECHDC1Q9NTX5 307 aa23.03■■□□□ 1.28
GHDC-212ENST00000593209 TRIM28Q13263 835 aaKnown RBP23.03■■□□□ 1.28
GHDC-212ENST00000593209 R3HDM1Q15032 1099 aaKnown RBP23.03■■□□□ 1.28
GHDC-212ENST00000593209 RC3H1Q5TC82 1133 aaKnown RBP23.03■■□□□ 1.28
GHDC-212ENST00000593209 KIF6Q6ZMV9 814 aa23.03■■□□□ 1.28
GHDC-212ENST00000593209 GLRX3O76003 335 aaKnown RBP23.02■■□□□ 1.28
GHDC-212ENST00000593209 IFIT2P09913 472 aaKnown RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms