RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 IQCA1LA6NCM1 817 aa17.34■□□□□ 0.37
APOC1-209ENST00000592885 L3MBTL3Q96JM7 780 aaPredicted RBP17.34■□□□□ 0.37
APOC1-209ENST00000592885 NEUROD2Q15784 382 aa17.33■□□□□ 0.36
APOC1-209ENST00000592885 KLRG1Q96E93 195 aa17.33■□□□□ 0.36
APOC1-209ENST00000592885 RBM17Q96I25 401 aaKnown RBP17.33■□□□□ 0.36
APOC1-209ENST00000592885 CRAMP1Q96RY5 1269 aa17.33■□□□□ 0.36
APOC1-209ENST00000592885 DDX21Q9NR30 783 aaKnown RBP eCLIP17.33■□□□□ 0.36
APOC1-209ENST00000592885 ADAMTS8Q9UP79 889 aa17.33■□□□□ 0.36
APOC1-209ENST00000592885 LAMB2P55268 1798 aa17.33■□□□□ 0.36
APOC1-209ENST00000592885 DDNO94850 711 aaPredicted RBP17.32■□□□□ 0.36
APOC1-209ENST00000592885 IARSP41252 1262 aaKnown RBP17.32■□□□□ 0.36
APOC1-209ENST00000592885 PROSER3Q2NL68 480 aa17.32■□□□□ 0.36
APOC1-209ENST00000592885 UTP14AQ9BVJ6 771 aaKnown RBP17.32■□□□□ 0.36
APOC1-209ENST00000592885 ZNF277Q9NRM2 450 aaPredicted RBP17.32■□□□□ 0.36
APOC1-209ENST00000592885 SLC10A5Q5PT55 438 aa17.31■□□□□ 0.36
APOC1-209ENST00000592885 CFAP44Q96MT7 982 aa17.31■□□□□ 0.36
APOC1-209ENST00000592885 NLRP3Q96P20 1036 aa17.31■□□□□ 0.36
APOC1-209ENST00000592885 ANXA1P04083 346 aa17.3■□□□□ 0.36
APOC1-209ENST00000592885 OLFM4Q6UX06 510 aa17.3■□□□□ 0.36
APOC1-209ENST00000592885 COPS6Q7L5N1 327 aa17.3■□□□□ 0.36
APOC1-209ENST00000592885 SYNE4Q8N205 404 aa17.3■□□□□ 0.36
APOC1-209ENST00000592885 JMYQ8N9B5 988 aa17.3■□□□□ 0.36
APOC1-209ENST00000592885 XAGE3Q8WTP9 111 aa17.3■□□□□ 0.36
APOC1-209ENST00000592885 ZNF541Q9H0D2 1346 aa17.29■□□□□ 0.36
APOC1-209ENST00000592885 FZD9O00144 591 aa17.29■□□□□ 0.36
APOC1-209ENST00000592885 PPEF1O14829 653 aaPredicted RBP17.29■□□□□ 0.36
APOC1-209ENST00000592885 CALD1Q05682 793 aaKnown RBP17.29■□□□□ 0.36
APOC1-209ENST00000592885 HDGFL1Q5TGJ6 251 aa17.29■□□□□ 0.36
APOC1-209ENST00000592885 CHADLQ6NUI6 762 aa17.29■□□□□ 0.36
APOC1-209ENST00000592885 LAS1LQ9Y4W2 734 aaKnown RBP17.29■□□□□ 0.36
APOC1-209ENST00000592885 ADAMTSL1Q8N6G6 1762 aa17.29■□□□□ 0.36
APOC1-209ENST00000592885 TCIRG1Q13488 830 aa17.28■□□□□ 0.36
APOC1-209ENST00000592885 NLRP10Q86W26 655 aa17.28■□□□□ 0.36
APOC1-209ENST00000592885 JDP2Q8WYK2 163 aa17.28■□□□□ 0.36
APOC1-209ENST00000592885 TMX4Q9H1E5 349 aaPredicted RBP17.28■□□□□ 0.36
APOC1-209ENST00000592885 CHPF2Q9P2E5 772 aa17.28■□□□□ 0.36
APOC1-209ENST00000592885 DBF4Q9UBU7 674 aaPredicted RBP17.28■□□□□ 0.36
APOC1-209ENST00000592885 HTRA3P83110 453 aa17.27■□□□□ 0.36
APOC1-209ENST00000592885 AIMP1Q12904 312 aaKnown RBP17.27■□□□□ 0.36
APOC1-209ENST00000592885 KRT24Q2M2I5 525 aa17.27■□□□□ 0.36
APOC1-209ENST00000592885 LDHDQ86WU2 507 aa17.27■□□□□ 0.36
APOC1-209ENST00000592885 GPC2Q8N158 579 aa17.27■□□□□ 0.36
APOC1-209ENST00000592885 PLBD2Q8NHP8 589 aa17.27■□□□□ 0.36
APOC1-209ENST00000592885 NECTIN2Q92692 538 aa17.27■□□□□ 0.36
APOC1-209ENST00000592885 VPS33BQ9H267 617 aa17.27■□□□□ 0.36
APOC1-209ENST00000592885 TAF1DQ9H5J8 278 aaPredicted RBP17.27■□□□□ 0.36
APOC1-209ENST00000592885 DDX60Q8IY21 1712 aaKnown RBP17.27■□□□□ 0.35
APOC1-209ENST00000592885 SH3TC1Q8TE82 1336 aa17.26■□□□□ 0.35
APOC1-209ENST00000592885 ZNF853P0CG23 659 aa17.26■□□□□ 0.35
APOC1-209ENST00000592885 C3orf67Q6ZVT6 689 aa17.26■□□□□ 0.35
APOC1-209ENST00000592885 IFT57Q9NWB7 429 aa17.26■□□□□ 0.35
APOC1-209ENST00000592885 HYPKQ9NX55 129 aa17.26■□□□□ 0.35
APOC1-209ENST00000592885 HACL1Q9UJ83 578 aa17.26■□□□□ 0.35
APOC1-209ENST00000592885 COL4A5P29400 1685 aa17.26■□□□□ 0.35
APOC1-209ENST00000592885 LRRC37AA6NMS7 1700 aa17.25■□□□□ 0.35
APOC1-209ENST00000592885 GNAI1P63096 354 aa17.25■□□□□ 0.35
APOC1-209ENST00000592885 IFFO2Q5TF58 517 aa17.25■□□□□ 0.35
APOC1-209ENST00000592885 MBIPQ9NS73 344 aa17.25■□□□□ 0.35
APOC1-209ENST00000592885 ATP6V0A2Q9Y487 856 aa17.25■□□□□ 0.35
APOC1-209ENST00000592885 ABCC4O15439 1325 aa17.24■□□□□ 0.35
APOC1-209ENST00000592885 EIF6P56537 245 aaKnown RBP17.24■□□□□ 0.35
APOC1-209ENST00000592885 DUSP27Q5VZP5 1158 aa17.24■□□□□ 0.35
APOC1-209ENST00000592885 PNMA8AQ86V59 439 aaPredicted RBP17.24■□□□□ 0.35
APOC1-209ENST00000592885 CREBZFQ9NS37 354 aa17.24■□□□□ 0.35
APOC1-209ENST00000592885 TRMT112Q9UI30 125 aaKnown RBP17.24■□□□□ 0.35
APOC1-209ENST00000592885 APAF1O14727 1248 aa17.23■□□□□ 0.35
APOC1-209ENST00000592885 BBOX1O75936 387 aa17.23■□□□□ 0.35
APOC1-209ENST00000592885 ANKRD13DQ6ZTN6 518 aa17.23■□□□□ 0.35
APOC1-209ENST00000592885 TMC4Q7Z404 712 aa17.23■□□□□ 0.35
APOC1-209ENST00000592885 LARGE2Q8N3Y3 721 aa17.23■□□□□ 0.35
APOC1-209ENST00000592885 SUPT20HQ8NEM7 779 aa17.23■□□□□ 0.35
APOC1-209ENST00000592885 CHMP4AQ9BY43 222 aa17.23■□□□□ 0.35
APOC1-209ENST00000592885 PASKQ96RG2 1323 aa17.22■□□□□ 0.35
APOC1-209ENST00000592885 POTEIP0CG38 1075 aa17.22■□□□□ 0.35
APOC1-209ENST00000592885 POTEJP0CG39 1038 aa17.22■□□□□ 0.35
APOC1-209ENST00000592885 EPHX2P34913 555 aa17.22■□□□□ 0.35
APOC1-209ENST00000592885 DDX46Q7L014 1031 aaKnown RBP17.22■□□□□ 0.35
APOC1-209ENST00000592885 ISCA1Q9BUE6 129 aa17.22■□□□□ 0.35
APOC1-209ENST00000592885 ZEB1P37275 1124 aaPredicted RBP17.21■□□□□ 0.35
APOC1-209ENST00000592885 GRAPQ13588 217 aa17.21■□□□□ 0.35
APOC1-209ENST00000592885 SP8Q8IXZ3 490 aa17.21■□□□□ 0.35
APOC1-209ENST00000592885 NIM1KQ8IY84 436 aa17.21■□□□□ 0.35
APOC1-209ENST00000592885 GRAPLQ8TC17 118 aaPredicted RBP17.21■□□□□ 0.35
APOC1-209ENST00000592885 RTFDC1Q9BY42 306 aaPredicted RBP17.21■□□□□ 0.35
APOC1-209ENST00000592885 LTBP1Q14766 1721 aa17.21■□□□□ 0.35
APOC1-209ENST00000592885 PPIP5K2O43314 1243 aa17.2■□□□□ 0.34
APOC1-209ENST00000592885 HCLS1P14317 486 aaPredicted RBP17.2■□□□□ 0.34
APOC1-209ENST00000592885 LMOD1P29536 600 aaPredicted RBP17.2■□□□□ 0.34
APOC1-209ENST00000592885 TRIM28Q13263 835 aaKnown RBP17.2■□□□□ 0.34
APOC1-209ENST00000592885 GOLGA2Q08379 1002 aa17.19■□□□□ 0.34
APOC1-209ENST00000592885 EAPPQ56P03 285 aaPredicted RBP17.19■□□□□ 0.34
APOC1-209ENST00000592885 DUOX1Q9NRD9 1551 aa17.19■□□□□ 0.34
APOC1-209ENST00000592885 TCERG1O14776 1098 aaKnown RBP17.18■□□□□ 0.34
APOC1-209ENST00000592885 HSP90B1P14625 803 aaKnown RBP17.18■□□□□ 0.34
APOC1-209ENST00000592885 DPP8Q6V1X1 898 aaPredicted RBP17.18■□□□□ 0.34
APOC1-209ENST00000592885 SF3B3Q15393 1217 aaKnown RBP17.17■□□□□ 0.34
APOC1-209ENST00000592885 AOC3Q16853 763 aa17.17■□□□□ 0.34
APOC1-209ENST00000592885 CCDC27Q2M243 656 aa17.17■□□□□ 0.34
APOC1-209ENST00000592885 MPNDQ8N594 471 aa17.17■□□□□ 0.34
APOC1-209ENST00000592885 GJA3Q9Y6H8 435 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms