RNA–Protein interactions for RNA: ENST00000591756.1

TMC6-220, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-220ENST00000591756 DPY19L2Q6NUT2 758 aa23.3■■□□□ 1.32
TMC6-220ENST00000591756 HOXB7P09629 217 aa23.29■■□□□ 1.32
TMC6-220ENST00000591756 VEGFAP15692 232 aaPredicted RBP23.29■■□□□ 1.32
TMC6-220ENST00000591756 C3orf67Q6ZVT6 689 aa23.29■■□□□ 1.32
TMC6-220ENST00000591756 RPGRQ92834 1020 aaKnown RBP23.29■■□□□ 1.32
TMC6-220ENST00000591756 UTP14AQ9BVJ6 771 aaKnown RBP23.29■■□□□ 1.32
TMC6-220ENST00000591756 RIC1Q4ADV7 1423 aa23.28■■□□□ 1.32
TMC6-220ENST00000591756 FKBP4Q02790 459 aaKnown RBP eCLIP23.28■■□□□ 1.32
TMC6-220ENST00000591756 HSP90AB3PQ58FF7 597 aa23.28■■□□□ 1.32
TMC6-220ENST00000591756 IFT57Q9NWB7 429 aa23.28■■□□□ 1.32
TMC6-220ENST00000591756 HOXA10P31260 410 aaPredicted RBP23.27■■□□□ 1.32
TMC6-220ENST00000591756 GNAI1P63096 354 aa23.27■■□□□ 1.32
TMC6-220ENST00000591756 RTKN2Q8IZC4 609 aa23.27■■□□□ 1.32
TMC6-220ENST00000591756 ZNF277Q9NRM2 450 aaPredicted RBP23.27■■□□□ 1.32
TMC6-220ENST00000591756 POTECB2RU33 542 aa23.26■■□□□ 1.31
TMC6-220ENST00000591756 CALD1Q05682 793 aaKnown RBP23.26■■□□□ 1.31
TMC6-220ENST00000591756 TCIRG1Q13488 830 aa23.26■■□□□ 1.31
TMC6-220ENST00000591756 NLRP10Q86W26 655 aa23.26■■□□□ 1.31
TMC6-220ENST00000591756 RBM17Q96I25 401 aaKnown RBP23.26■■□□□ 1.31
TMC6-220ENST00000591756 DBF4Q9UBU7 674 aaPredicted RBP23.26■■□□□ 1.31
TMC6-220ENST00000591756 ELL2O00472 640 aaPredicted RBP23.25■■□□□ 1.31
TMC6-220ENST00000591756 APLP1P51693 650 aa23.25■■□□□ 1.31
TMC6-220ENST00000591756 FSTL1Q12841 308 aa23.25■■□□□ 1.31
TMC6-220ENST00000591756 SLC10A5Q5PT55 438 aa23.25■■□□□ 1.31
TMC6-220ENST00000591756 NLRP3Q96P20 1036 aa23.25■■□□□ 1.31
TMC6-220ENST00000591756 ANKRD36CQ5JPF3 1778 aa23.24■■□□□ 1.31
TMC6-220ENST00000591756 DDNO94850 711 aaPredicted RBP23.24■■□□□ 1.31
TMC6-220ENST00000591756 SYNE4Q8N205 404 aa23.24■■□□□ 1.31
TMC6-220ENST00000591756 ZNF428Q96B54 188 aa23.24■■□□□ 1.31
TMC6-220ENST00000591756 CRAMP1Q96RY5 1269 aa23.24■■□□□ 1.31
TMC6-220ENST00000591756 WDR90Q96KV7 1748 aa23.23■■□□□ 1.31
TMC6-220ENST00000591756 TCERG1O14776 1098 aaKnown RBP23.23■■□□□ 1.31
TMC6-220ENST00000591756 ANKRD13DQ6ZTN6 518 aa23.23■■□□□ 1.31
TMC6-220ENST00000591756 SLC51AQ86UW1 340 aa23.23■■□□□ 1.31
TMC6-220ENST00000591756 PLBD2Q8NHP8 589 aa23.23■■□□□ 1.31
TMC6-220ENST00000591756 HCLS1P14317 486 aaPredicted RBP23.22■■□□□ 1.31
TMC6-220ENST00000591756 SMC1BQ8NDV3 1235 aa23.22■■□□□ 1.31
TMC6-220ENST00000591756 HYPKQ9NX55 129 aa23.22■■□□□ 1.31
TMC6-220ENST00000591756 TRMT112Q9UI30 125 aaKnown RBP23.22■■□□□ 1.31
TMC6-220ENST00000591756 ANP32CO43423 234 aa23.21■■□□□ 1.31
TMC6-220ENST00000591756 CC2D2BQ6DHV5 1058 aa23.21■■□□□ 1.31
TMC6-220ENST00000591756 MRS2Q9HD23 443 aa23.21■■□□□ 1.31
TMC6-220ENST00000591756 RNF123Q5XPI4 1314 aa23.21■■□□□ 1.31
TMC6-220ENST00000591756 SNED1Q8TER0 1413 aa23.21■■□□□ 1.31
TMC6-220ENST00000591756 PPEF1O14829 653 aaPredicted RBP23.2■■□□□ 1.3
TMC6-220ENST00000591756 IARSP41252 1262 aaKnown RBP23.2■■□□□ 1.3
TMC6-220ENST00000591756 C8orf58Q8NAV2 365 aa23.2■■□□□ 1.3
TMC6-220ENST00000591756 SH3TC1Q8TE82 1336 aa23.19■■□□□ 1.3
TMC6-220ENST00000591756 ATP5J2-PTCD1G3V325 749 aa23.19■■□□□ 1.3
TMC6-220ENST00000591756 PSMD1Q99460 953 aa23.19■■□□□ 1.3
TMC6-220ENST00000591756 ZNF541Q9H0D2 1346 aa23.18■■□□□ 1.3
TMC6-220ENST00000591756 HTRA3P83110 453 aa23.18■■□□□ 1.3
TMC6-220ENST00000591756 ISCA1Q9BUE6 129 aa23.18■■□□□ 1.3
TMC6-220ENST00000591756 PHAXQ9H814 394 aaKnown RBP23.18■■□□□ 1.3
TMC6-220ENST00000591756 ABCC4O15439 1325 aa23.17■■□□□ 1.3
TMC6-220ENST00000591756 LAMB2P55268 1798 aa23.17■■□□□ 1.3
TMC6-220ENST00000591756 DNAJC5GQ8N7S2 189 aa23.16■■□□□ 1.3
TMC6-220ENST00000591756 TSR2Q969E8 191 aaKnown RBP23.16■■□□□ 1.3
TMC6-220ENST00000591756 CCDC27Q2M243 656 aa23.15■■□□□ 1.3
TMC6-220ENST00000591756 RIC3Q7Z5B4 369 aa23.15■■□□□ 1.3
TMC6-220ENST00000591756 WWC1Q8IX03 1113 aa23.15■■□□□ 1.3
TMC6-220ENST00000591756 TSPYL6Q8N831 410 aa23.15■■□□□ 1.3
TMC6-220ENST00000591756 FAM89AQ96GI7 184 aa23.15■■□□□ 1.3
TMC6-220ENST00000591756 ATP6V0A2Q9Y487 856 aa23.15■■□□□ 1.3
TMC6-220ENST00000591756 FZD9O00144 591 aa23.14■■□□□ 1.29
TMC6-220ENST00000591756 GOLGA2Q08379 1002 aa23.14■■□□□ 1.29
TMC6-220ENST00000591756 GRIPAP1Q4V328 841 aa23.14■■□□□ 1.29
TMC6-220ENST00000591756 JDP2Q8WYK2 163 aa23.14■■□□□ 1.29
TMC6-220ENST00000591756 L3MBTL3Q96JM7 780 aaPredicted RBP23.14■■□□□ 1.29
TMC6-220ENST00000591756 POTEIP0CG38 1075 aa23.13■■□□□ 1.29
TMC6-220ENST00000591756 POTEJP0CG39 1038 aa23.13■■□□□ 1.29
TMC6-220ENST00000591756 RTL5Q5HYW3 569 aaPredicted RBP23.13■■□□□ 1.29
TMC6-220ENST00000591756 DDX46Q7L014 1031 aaKnown RBP23.13■■□□□ 1.29
TMC6-220ENST00000591756 TMX4Q9H1E5 349 aaPredicted RBP23.13■■□□□ 1.29
TMC6-220ENST00000591756 COL4A5P29400 1685 aa23.13■■□□□ 1.29
TMC6-220ENST00000591756 BBOX1O75936 387 aa23.12■■□□□ 1.29
TMC6-220ENST00000591756 TRIM28Q13263 835 aaKnown RBP23.12■■□□□ 1.29
TMC6-220ENST00000591756 IFFO2Q5TF58 517 aa23.12■■□□□ 1.29
TMC6-220ENST00000591756 CCDC30Q5VVM6 783 aa23.12■■□□□ 1.29
TMC6-220ENST00000591756 LARGE2Q8N3Y3 721 aa23.12■■□□□ 1.29
TMC6-220ENST00000591756 IQCA1LA6NCM1 817 aa23.11■■□□□ 1.29
TMC6-220ENST00000591756 GRAPQ13588 217 aa23.1■■□□□ 1.29
TMC6-220ENST00000591756 SP8Q8IXZ3 490 aa23.1■■□□□ 1.29
TMC6-220ENST00000591756 GRAPLQ8TC17 118 aaPredicted RBP23.1■■□□□ 1.29
TMC6-220ENST00000591756 MYD88Q99836 296 aa23.1■■□□□ 1.29
TMC6-220ENST00000591756 TAF1DQ9H5J8 278 aaPredicted RBP23.1■■□□□ 1.29
TMC6-220ENST00000591756 SALL2Q9Y467 1007 aaPredicted RBP23.1■■□□□ 1.29
TMC6-220ENST00000591756 TAF1P21675 1872 aa23.1■■□□□ 1.29
TMC6-220ENST00000591756 DDX60Q8IY21 1712 aaKnown RBP23.1■■□□□ 1.29
TMC6-220ENST00000591756 EIF6P56537 245 aaKnown RBP23.09■■□□□ 1.29
TMC6-220ENST00000591756 CHADLQ6NUI6 762 aa23.09■■□□□ 1.29
TMC6-220ENST00000591756 CHMP4AQ9BY43 222 aa23.09■■□□□ 1.29
TMC6-220ENST00000591756 SCN4AP35499 1836 aa23.09■■□□□ 1.29
TMC6-220ENST00000591756 PPIP5K2O43314 1243 aa23.08■■□□□ 1.29
TMC6-220ENST00000591756 GPC2Q8N158 579 aa23.08■■□□□ 1.29
TMC6-220ENST00000591756 HACL1Q9UJ83 578 aa23.08■■□□□ 1.29
TMC6-220ENST00000591756 GJA3Q9Y6H8 435 aa23.08■■□□□ 1.29
TMC6-220ENST00000591756 IRS4O14654 1257 aaPredicted RBP23.07■■□□□ 1.28
TMC6-220ENST00000591756 SF3B3Q15393 1217 aaKnown RBP23.07■■□□□ 1.28
TMC6-220ENST00000591756 AOC3Q16853 763 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 190.3 ms