RNA–Protein interactions for RNA: ENST00000590683.2

AP3D1-208, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 5

Gene AP3D1, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-208ENST00000590683 PGAP2Q9UHJ9 254 aa12.03□□□□□ -0.48
AP3D1-208ENST00000590683 ZNF157P51786 506 aaPredicted RBP12.02□□□□□ -0.49
AP3D1-208ENST00000590683 CDC37L1Q7L3B6 337 aa12.02□□□□□ -0.49
AP3D1-208ENST00000590683 AEBP1Q8IUX7 1158 aa12.02□□□□□ -0.49
AP3D1-208ENST00000590683 LARGE2Q8N3Y3 721 aa12.02□□□□□ -0.49
AP3D1-208ENST00000590683 ZNF296Q8WUU4 475 aaPredicted RBP12.02□□□□□ -0.49
AP3D1-208ENST00000590683 SLC52A2Q9HAB3 445 aa12.02□□□□□ -0.49
AP3D1-208ENST00000590683 HTTP42858 3142 aa12.02□□□□□ -0.49
AP3D1-208ENST00000590683 MRC1P22897 1456 aa12.02□□□□□ -0.49
AP3D1-208ENST00000590683 FBXO46Q6PJ61 603 aaPredicted RBP12.01□□□□□ -0.49
AP3D1-208ENST00000590683 USP48Q86UV5 1035 aa12.01□□□□□ -0.49
AP3D1-208ENST00000590683 CCDC102AQ96A19 550 aa12.01□□□□□ -0.49
AP3D1-208ENST00000590683 CARD14Q9BXL6 1004 aa12.01□□□□□ -0.49
AP3D1-208ENST00000590683 LGR6Q9HBX8 967 aa12.01□□□□□ -0.49
AP3D1-208ENST00000590683 KLRG2A4D1S0 409 aaPredicted RBP12□□□□□ -0.49
AP3D1-208ENST00000590683 CAMTA2O94983 1202 aa12□□□□□ -0.49
AP3D1-208ENST00000590683 NEUROD1Q13562 356 aa12□□□□□ -0.49
AP3D1-208ENST00000590683 NBPF5PQ86XG9 351 aaPredicted RBP12□□□□□ -0.49
AP3D1-208ENST00000590683 TRPM4Q8TD43 1214 aa12□□□□□ -0.49
AP3D1-208ENST00000590683 KIAA0100Q14667 2235 aaKnown RBP12□□□□□ -0.49
AP3D1-208ENST00000590683 CEP290O15078 2479 aa12□□□□□ -0.49
AP3D1-208ENST00000590683 SHTN1A0MZ66 631 aa11.99□□□□□ -0.49
AP3D1-208ENST00000590683 TBC1D8O95759 1140 aa11.99□□□□□ -0.49
AP3D1-208ENST00000590683 SLC10A3P09131 477 aa11.99□□□□□ -0.49
AP3D1-208ENST00000590683 GMPSP49915 693 aaPredicted RBP11.99□□□□□ -0.49
AP3D1-208ENST00000590683 VSIG10Q8N0Z9 540 aa11.99□□□□□ -0.49
AP3D1-208ENST00000590683 GBA2Q9HCG7 927 aaPredicted RBP11.99□□□□□ -0.49
AP3D1-208ENST00000590683 NPC1L1Q9UHC9 1359 aa11.98□□□□□ -0.49
AP3D1-208ENST00000590683 STARD3NLO95772 234 aa11.98□□□□□ -0.49
AP3D1-208ENST00000590683 NIM1KQ8IY84 436 aa11.98□□□□□ -0.49
AP3D1-208ENST00000590683 ZC3H15Q8WU90 426 aaKnown RBP11.98□□□□□ -0.49
AP3D1-208ENST00000590683 PITPNM2Q9BZ72 1349 aa11.97□□□□□ -0.49
AP3D1-208ENST00000590683 ALDH1B1P30837 517 aa11.97□□□□□ -0.49
AP3D1-208ENST00000590683 TNNT2P45379 298 aaPredicted RBP11.97□□□□□ -0.49
AP3D1-208ENST00000590683 CXCL9Q07325 125 aa11.97□□□□□ -0.49
AP3D1-208ENST00000590683 C2orf69Q8N8R5 385 aa11.97□□□□□ -0.49
AP3D1-208ENST00000590683 CNKSR2Q8WXI2 1034 aa11.97□□□□□ -0.49
AP3D1-208ENST00000590683 RANBP2P49792 3224 aaKnown RBP11.96□□□□□ -0.49
AP3D1-208ENST00000590683 FAM177BA6PVY3 158 aa11.96□□□□□ -0.49
AP3D1-208ENST00000590683 IL6STP40189 918 aaPredicted RBP11.96□□□□□ -0.49
AP3D1-208ENST00000590683 OTUD5Q96G74 571 aa11.96□□□□□ -0.49
AP3D1-208ENST00000590683 ADM5C9JUS6 153 aa11.95□□□□□ -0.5
AP3D1-208ENST00000590683 RNMTO43148 476 aaKnown RBP11.95□□□□□ -0.5
AP3D1-208ENST00000590683 PPIP5K2O43314 1243 aa11.95□□□□□ -0.5
AP3D1-208ENST00000590683 A1BGP04217 495 aa11.95□□□□□ -0.5
AP3D1-208ENST00000590683 EN2P19622 333 aaPredicted RBP11.95□□□□□ -0.5
AP3D1-208ENST00000590683 AOC3Q16853 763 aa11.95□□□□□ -0.5
AP3D1-208ENST00000590683 RASAL3Q86YV0 1011 aa11.95□□□□□ -0.5
AP3D1-208ENST00000590683 H0YGN5 161 aa11.94□□□□□ -0.5
AP3D1-208ENST00000590683 GPR25O00155 361 aa11.94□□□□□ -0.5
AP3D1-208ENST00000590683 TCERG1O14776 1098 aaKnown RBP11.94□□□□□ -0.5
AP3D1-208ENST00000590683 ZBTB22O15209 634 aa11.94□□□□□ -0.5
AP3D1-208ENST00000590683 MNX1P50219 401 aaPredicted RBP11.94□□□□□ -0.5
AP3D1-208ENST00000590683 DZIP3Q86Y13 1208 aaKnown RBP11.94□□□□□ -0.5
AP3D1-208ENST00000590683 BCL2L13Q9BXK5 485 aa11.94□□□□□ -0.5
AP3D1-208ENST00000590683 UNC80Q8N2C7 3258 aa11.93□□□□□ -0.5
AP3D1-208ENST00000590683 PIP4K2AP48426 406 aaPredicted RBP11.93□□□□□ -0.5
AP3D1-208ENST00000590683 CC2D2BQ6DHV5 1058 aa11.93□□□□□ -0.5
AP3D1-208ENST00000590683 SULT6B1Q6IMI4 303 aa11.93□□□□□ -0.5
AP3D1-208ENST00000590683 CHRDL2Q6WN34 429 aa11.93□□□□□ -0.5
AP3D1-208ENST00000590683 KRT26Q7Z3Y9 468 aa11.93□□□□□ -0.5
AP3D1-208ENST00000590683 CNOT7Q9UIV1 285 aaKnown RBP11.93□□□□□ -0.5
AP3D1-208ENST00000590683 TPTE2Q6XPS3 522 aa11.92□□□□□ -0.5
AP3D1-208ENST00000590683 REM2Q8IYK8 340 aaPredicted RBP11.92□□□□□ -0.5
AP3D1-208ENST00000590683 ZNF496Q96IT1 587 aaPredicted RBP11.92□□□□□ -0.5
AP3D1-208ENST00000590683 RBM27Q9P2N5 1060 aaKnown RBP11.92□□□□□ -0.5
AP3D1-208ENST00000590683 ZNRF3Q9ULT6 936 aa11.92□□□□□ -0.5
AP3D1-208ENST00000590683 HEG1Q9ULI3 1381 aa11.92□□□□□ -0.5
AP3D1-208ENST00000590683 CDHR2Q9BYE9 1310 aa11.91□□□□□ -0.5
AP3D1-208ENST00000590683 RAD17O75943 681 aa11.91□□□□□ -0.5
AP3D1-208ENST00000590683 EGFRP00533 1210 aa11.91□□□□□ -0.5
AP3D1-208ENST00000590683 INTS3Q68E01 1043 aaKnown RBP11.91□□□□□ -0.5
AP3D1-208ENST00000590683 SAMD7Q7Z3H4 446 aa11.91□□□□□ -0.5
AP3D1-208ENST00000590683 NPM2Q86SE8 214 aaKnown RBP11.91□□□□□ -0.5
AP3D1-208ENST00000590683 MICALL2Q8IY33 904 aa11.91□□□□□ -0.5
AP3D1-208ENST00000590683 R3HDMLQ9H3Y0 253 aa11.91□□□□□ -0.5
AP3D1-208ENST00000590683 NIP7Q9Y221 180 aaKnown RBP eCLIP11.91□□□□□ -0.5
AP3D1-208ENST00000590683 SIPA1L3O60292 1781 aaPredicted RBP11.91□□□□□ -0.5
AP3D1-208ENST00000590683 ABCC12Q96J65 1359 aa11.91□□□□□ -0.5
AP3D1-208ENST00000590683 CRY2Q49AN0 593 aa11.9□□□□□ -0.5
AP3D1-208ENST00000590683 TTC5Q8N0Z6 440 aa11.9□□□□□ -0.5
AP3D1-208ENST00000590683 H7C1D1 291 aa11.89□□□□□ -0.51
AP3D1-208ENST00000590683 FKTNO75072 461 aa11.89□□□□□ -0.51
AP3D1-208ENST00000590683 TBC1D10BQ4KMP7 808 aaPredicted RBP11.89□□□□□ -0.51
AP3D1-208ENST00000590683 NOM1Q5C9Z4 860 aaKnown RBP11.89□□□□□ -0.51
AP3D1-208ENST00000590683 CLEC4GQ6UXB4 293 aa11.89□□□□□ -0.51
AP3D1-208ENST00000590683 PPEF1O14829 653 aaPredicted RBP11.88□□□□□ -0.51
AP3D1-208ENST00000590683 SLC24A1O60721 1099 aa11.88□□□□□ -0.51
AP3D1-208ENST00000590683 GRIPAP1Q4V328 841 aa11.88□□□□□ -0.51
AP3D1-208ENST00000590683 NUTM1Q86Y26 1132 aa11.88□□□□□ -0.51
AP3D1-208ENST00000590683 COL25A1Q9BXS0 654 aaPredicted RBP11.88□□□□□ -0.51
AP3D1-208ENST00000590683 TEX13AQ9BXU3 409 aaPredicted RBP11.88□□□□□ -0.51
AP3D1-208ENST00000590683 ZNF652Q9Y2D9 606 aa11.88□□□□□ -0.51
AP3D1-208ENST00000590683 ZBTB12Q9Y330 459 aaPredicted RBP11.88□□□□□ -0.51
AP3D1-208ENST00000590683 TRIM17Q9Y577 477 aa11.88□□□□□ -0.51
AP3D1-208ENST00000590683 LAMA3Q16787 3333 aa11.88□□□□□ -0.51
AP3D1-208ENST00000590683 GTF2E1P29083 439 aaPredicted RBP11.87□□□□□ -0.51
AP3D1-208ENST00000590683 TNIP1Q15025 636 aa11.87□□□□□ -0.51
AP3D1-208ENST00000590683 RPGRQ92834 1020 aaKnown RBP11.87□□□□□ -0.51
AP3D1-208ENST00000590683 DCPSQ96C86 337 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms