RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 UTP14AQ9BVJ6 771 aaKnown RBP26.71■■□□□ 1.87
CIRBP-226ENST00000590171 ANKRD36CQ5JPF3 1778 aa26.71■■□□□ 1.87
CIRBP-226ENST00000590171 TCIRG1Q13488 830 aa26.7■■□□□ 1.86
CIRBP-226ENST00000590171 CCDC93Q567U6 631 aa26.7■■□□□ 1.86
CIRBP-226ENST00000590171 OLFM4Q6UX06 510 aa26.7■■□□□ 1.86
CIRBP-226ENST00000590171 NLRP10Q86W26 655 aa26.7■■□□□ 1.86
CIRBP-226ENST00000590171 C3orf67Q6ZVT6 689 aa26.69■■□□□ 1.86
CIRBP-226ENST00000590171 WWC1Q8IX03 1113 aa26.69■■□□□ 1.86
CIRBP-226ENST00000590171 C8orf58Q8NAV2 365 aa26.69■■□□□ 1.86
CIRBP-226ENST00000590171 HYPKQ9NX55 129 aa26.69■■□□□ 1.86
CIRBP-226ENST00000590171 HOXA10P31260 410 aaPredicted RBP26.68■■□□□ 1.86
CIRBP-226ENST00000590171 PLBD2Q8NHP8 589 aa26.68■■□□□ 1.86
CIRBP-226ENST00000590171 RPGRQ92834 1020 aaKnown RBP26.68■■□□□ 1.86
CIRBP-226ENST00000590171 RNF123Q5XPI4 1314 aa26.67■■□□□ 1.86
CIRBP-226ENST00000590171 TOMM70O94826 608 aa26.67■■□□□ 1.86
CIRBP-226ENST00000590171 ANKRD13DQ6ZTN6 518 aa26.67■■□□□ 1.86
CIRBP-226ENST00000590171 RRAGCQ9HB90 399 aa26.67■■□□□ 1.86
CIRBP-226ENST00000590171 CCDC88AQ3V6T2 1871 aa26.66■■□□□ 1.86
CIRBP-226ENST00000590171 GLTPD2A6NH11 291 aa26.66■■□□□ 1.86
CIRBP-226ENST00000590171 SLC10A5Q5PT55 438 aa26.66■■□□□ 1.86
CIRBP-226ENST00000590171 TSR2Q969E8 191 aaKnown RBP26.66■■□□□ 1.86
CIRBP-226ENST00000590171 NCBP3Q53F19 620 aaKnown RBP26.65■■□□□ 1.86
CIRBP-226ENST00000590171 SNED1Q8TER0 1413 aa26.65■■□□□ 1.86
CIRBP-226ENST00000590171 FKBP4Q02790 459 aaKnown RBP eCLIP26.64■■□□□ 1.86
CIRBP-226ENST00000590171 TSPYL6Q8N831 410 aa26.64■■□□□ 1.86
CIRBP-226ENST00000590171 NLRP3Q96P20 1036 aa26.64■■□□□ 1.86
CIRBP-226ENST00000590171 RTKN2Q8IZC4 609 aa26.63■■□□□ 1.85
CIRBP-226ENST00000590171 SYNE4Q8N205 404 aa26.63■■□□□ 1.85
CIRBP-226ENST00000590171 RBM17Q96I25 401 aaKnown RBP26.63■■□□□ 1.85
CIRBP-226ENST00000590171 CRAMP1Q96RY5 1269 aa26.63■■□□□ 1.85
CIRBP-226ENST00000590171 PHAXQ9H814 394 aaKnown RBP26.63■■□□□ 1.85
CIRBP-226ENST00000590171 TRMT112Q9UI30 125 aaKnown RBP26.63■■□□□ 1.85
CIRBP-226ENST00000590171 ZNF428Q96B54 188 aa26.62■■□□□ 1.85
CIRBP-226ENST00000590171 ISCA1Q9BUE6 129 aa26.62■■□□□ 1.85
CIRBP-226ENST00000590171 DICER1Q9UPY3 1922 aaKnown RBP26.61■■□□□ 1.85
CIRBP-226ENST00000590171 HCLS1P14317 486 aaPredicted RBP26.61■■□□□ 1.85
CIRBP-226ENST00000590171 HSPA6P17066 643 aa26.61■■□□□ 1.85
CIRBP-226ENST00000590171 C16orf71Q8IYS4 520 aaPredicted RBP26.61■■□□□ 1.85
CIRBP-226ENST00000590171 IL16Q14005 1332 aa26.61■■□□□ 1.85
CIRBP-226ENST00000590171 SH3TC1Q8TE82 1336 aa26.61■■□□□ 1.85
CIRBP-226ENST00000590171 ATP5J2-PTCD1G3V325 749 aa26.6■■□□□ 1.85
CIRBP-226ENST00000590171 SLC51AQ86UW1 340 aa26.6■■□□□ 1.85
CIRBP-226ENST00000590171 ZNF277Q9NRM2 450 aaPredicted RBP26.6■■□□□ 1.85
CIRBP-226ENST00000590171 GOLGA2Q08379 1002 aa26.59■■□□□ 1.85
CIRBP-226ENST00000590171 CCDC30Q5VVM6 783 aa26.59■■□□□ 1.85
CIRBP-226ENST00000590171 DPY19L2Q6NUT2 758 aa26.59■■□□□ 1.85
CIRBP-226ENST00000590171 RBM46Q8TBY0 533 aaKnown RBP26.59■■□□□ 1.85
CIRBP-226ENST00000590171 SALL2Q9Y467 1007 aaPredicted RBP26.59■■□□□ 1.85
CIRBP-226ENST00000590171 PPEF1O14829 653 aaPredicted RBP26.58■■□□□ 1.85
CIRBP-226ENST00000590171 CC2D2BQ6DHV5 1058 aa26.58■■□□□ 1.85
CIRBP-226ENST00000590171 RIC3Q7Z5B4 369 aa26.58■■□□□ 1.85
CIRBP-226ENST00000590171 FAM9BQ8IZU0 186 aa26.58■■□□□ 1.85
CIRBP-226ENST00000590171 ABCC4O15439 1325 aa26.57■■□□□ 1.84
CIRBP-226ENST00000590171 LAMB2P55268 1798 aa26.56■■□□□ 1.84
CIRBP-226ENST00000590171 TCERG1O14776 1098 aaKnown RBP26.56■■□□□ 1.84
CIRBP-226ENST00000590171 VEGFAP15692 232 aaPredicted RBP26.56■■□□□ 1.84
CIRBP-226ENST00000590171 PSMD1Q99460 953 aa26.56■■□□□ 1.84
CIRBP-226ENST00000590171 CHMP4AQ9BY43 222 aa26.56■■□□□ 1.84
CIRBP-226ENST00000590171 WDR90Q96KV7 1748 aa26.56■■□□□ 1.84
CIRBP-226ENST00000590171 POTECB2RU33 542 aa26.55■■□□□ 1.84
CIRBP-226ENST00000590171 IARSP41252 1262 aaKnown RBP26.55■■□□□ 1.84
CIRBP-226ENST00000590171 TRIM28Q13263 835 aaKnown RBP26.55■■□□□ 1.84
CIRBP-226ENST00000590171 TWISTNBQ3B726 338 aaPredicted RBP26.55■■□□□ 1.84
CIRBP-226ENST00000590171 FAM89AQ96GI7 184 aa26.55■■□□□ 1.84
CIRBP-226ENST00000590171 DDNO94850 711 aaPredicted RBP26.54■■□□□ 1.84
CIRBP-226ENST00000590171 FANCIQ9NVI1 1328 aa26.54■■□□□ 1.84
CIRBP-226ENST00000590171 WDR63Q8IWG1 891 aa26.53■■□□□ 1.84
CIRBP-226ENST00000590171 DDX60Q8IY21 1712 aaKnown RBP26.53■■□□□ 1.84
CIRBP-226ENST00000590171 GRIPAP1Q4V328 841 aa26.52■■□□□ 1.84
CIRBP-226ENST00000590171 RTL5Q5HYW3 569 aaPredicted RBP26.52■■□□□ 1.84
CIRBP-226ENST00000590171 MYD88Q99836 296 aa26.52■■□□□ 1.84
CIRBP-226ENST00000590171 ATP6V0A2Q9Y487 856 aa26.52■■□□□ 1.84
CIRBP-226ENST00000590171 ZNF541Q9H0D2 1346 aa26.51■■□□□ 1.83
CIRBP-226ENST00000590171 FSTL1Q12841 308 aa26.51■■□□□ 1.83
CIRBP-226ENST00000590171 DDX58O95786 925 aaKnown RBP26.5■■□□□ 1.83
CIRBP-226ENST00000590171 DDX46Q7L014 1031 aaKnown RBP26.5■■□□□ 1.83
CIRBP-226ENST00000590171 STK31Q9BXU1 1019 aa26.5■■□□□ 1.83
CIRBP-226ENST00000590171 COL4A5P29400 1685 aa26.5■■□□□ 1.83
CIRBP-226ENST00000590171 BBOX1O75936 387 aa26.49■■□□□ 1.83
CIRBP-226ENST00000590171 GRAPQ13588 217 aa26.49■■□□□ 1.83
CIRBP-226ENST00000590171 GRAPLQ8TC17 118 aaPredicted RBP26.49■■□□□ 1.83
CIRBP-226ENST00000590171 METTL22Q9BUU2 404 aaPredicted RBP26.49■■□□□ 1.83
CIRBP-226ENST00000590171 SMC1BQ8NDV3 1235 aa26.48■■□□□ 1.83
CIRBP-226ENST00000590171 SPINK5Q9NQ38 1064 aaPredicted RBP26.48■■□□□ 1.83
CIRBP-226ENST00000590171 MAP3K2Q9Y2U5 619 aa26.48■■□□□ 1.83
CIRBP-226ENST00000590171 FZD9O00144 591 aa26.47■■□□□ 1.83
CIRBP-226ENST00000590171 IRS4O14654 1257 aaPredicted RBP26.47■■□□□ 1.83
CIRBP-226ENST00000590171 SF3B3Q15393 1217 aaKnown RBP26.47■■□□□ 1.83
CIRBP-226ENST00000590171 ZBTB38Q8NAP3 1195 aaPredicted RBP26.47■■□□□ 1.83
CIRBP-226ENST00000590171 CCDC191Q8NCU4 936 aa26.47■■□□□ 1.83
CIRBP-226ENST00000590171 TMX4Q9H1E5 349 aaPredicted RBP26.47■■□□□ 1.83
CIRBP-226ENST00000590171 PI4KAP2A4QPH2 592 aa26.46■■□□□ 1.83
CIRBP-226ENST00000590171 APLP1P51693 650 aa26.46■■□□□ 1.83
CIRBP-226ENST00000590171 KSR2Q6VAB6 950 aa26.46■■□□□ 1.83
CIRBP-226ENST00000590171 G2E3Q7L622 706 aa26.46■■□□□ 1.83
CIRBP-226ENST00000590171 SP8Q8IXZ3 490 aa26.46■■□□□ 1.83
CIRBP-226ENST00000590171 PI4KAP1Q8N8J0 262 aa26.46■■□□□ 1.83
CIRBP-226ENST00000590171 JDP2Q8WYK2 163 aa26.46■■□□□ 1.83
CIRBP-226ENST00000590171 L3MBTL3Q96JM7 780 aaPredicted RBP26.46■■□□□ 1.83
CIRBP-226ENST00000590171 SLC4A2P04920 1241 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms