RNA–Protein interactions for RNA: ENST00000589126.5

PRKCSH-208, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-208ENST00000589126 SALL2Q9Y467 1007 aaPredicted RBP17.52■□□□□ 0.4
PRKCSH-208ENST00000589126 CCDC88AQ3V6T2 1871 aa17.52■□□□□ 0.39
PRKCSH-208ENST00000589126 KIF3CO14782 793 aa17.51■□□□□ 0.39
PRKCSH-208ENST00000589126 OLFM4Q6UX06 510 aa17.51■□□□□ 0.39
PRKCSH-208ENST00000589126 PPP1R42Q7Z4L9 355 aa17.51■□□□□ 0.39
PRKCSH-208ENST00000589126 PLBD2Q8NHP8 589 aa17.51■□□□□ 0.39
PRKCSH-208ENST00000589126 IL16Q14005 1332 aa17.5■□□□□ 0.39
PRKCSH-208ENST00000589126 HSP90AB3PQ58FF7 597 aa17.5■□□□□ 0.39
PRKCSH-208ENST00000589126 ANKRD13DQ6ZTN6 518 aa17.5■□□□□ 0.39
PRKCSH-208ENST00000589126 SYNE4Q8N205 404 aa17.5■□□□□ 0.39
PRKCSH-208ENST00000589126 UTP14AQ9BVJ6 771 aaKnown RBP17.5■□□□□ 0.39
PRKCSH-208ENST00000589126 PHAXQ9H814 394 aaKnown RBP17.5■□□□□ 0.39
PRKCSH-208ENST00000589126 SLC10A5Q5PT55 438 aa17.49■□□□□ 0.39
PRKCSH-208ENST00000589126 ZNF428Q96B54 188 aa17.49■□□□□ 0.39
PRKCSH-208ENST00000589126 NMRK2Q9NPI5 230 aa17.49■□□□□ 0.39
PRKCSH-208ENST00000589126 LTBP3Q9NS15 1303 aa17.48■□□□□ 0.39
PRKCSH-208ENST00000589126 TIAM2Q8IVF5 1701 aa17.48■□□□□ 0.39
PRKCSH-208ENST00000589126 ALDH1B1P30837 517 aa17.48■□□□□ 0.39
PRKCSH-208ENST00000589126 HOXA10P31260 410 aaPredicted RBP17.48■□□□□ 0.39
PRKCSH-208ENST00000589126 ISCA1Q9BUE6 129 aa17.48■□□□□ 0.39
PRKCSH-208ENST00000589126 SOGA3Q5TF21 947 aa17.47■□□□□ 0.39
PRKCSH-208ENST00000589126 SLC51AQ86UW1 340 aa17.47■□□□□ 0.39
PRKCSH-208ENST00000589126 TAOK3Q9H2K8 898 aa17.47■□□□□ 0.39
PRKCSH-208ENST00000589126 SNED1Q8TER0 1413 aa17.47■□□□□ 0.39
PRKCSH-208ENST00000589126 RNF123Q5XPI4 1314 aa17.47■□□□□ 0.39
PRKCSH-208ENST00000589126 LAMB2P55268 1798 aa17.46■□□□□ 0.39
PRKCSH-208ENST00000589126 ATP5J2-PTCD1G3V325 749 aa17.46■□□□□ 0.39
PRKCSH-208ENST00000589126 HCLS1P14317 486 aaPredicted RBP17.46■□□□□ 0.39
PRKCSH-208ENST00000589126 CCDC93Q567U6 631 aa17.46■□□□□ 0.39
PRKCSH-208ENST00000589126 CCDC30Q5VVM6 783 aa17.46■□□□□ 0.39
PRKCSH-208ENST00000589126 WDR63Q8IWG1 891 aa17.46■□□□□ 0.39
PRKCSH-208ENST00000589126 RPGRQ92834 1020 aaKnown RBP17.46■□□□□ 0.39
PRKCSH-208ENST00000589126 SPINK5Q9NQ38 1064 aaPredicted RBP17.46■□□□□ 0.39
PRKCSH-208ENST00000589126 TRMT112Q9UI30 125 aaKnown RBP17.46■□□□□ 0.39
PRKCSH-208ENST00000589126 DICER1Q9UPY3 1922 aaKnown RBP17.46■□□□□ 0.39
PRKCSH-208ENST00000589126 FANCIQ9NVI1 1328 aa17.46■□□□□ 0.38
PRKCSH-208ENST00000589126 ZC3H4Q9UPT8 1303 aaKnown RBP17.46■□□□□ 0.38
PRKCSH-208ENST00000589126 TCERG1O14776 1098 aaKnown RBP17.45■□□□□ 0.38
PRKCSH-208ENST00000589126 TWISTNBQ3B726 338 aaPredicted RBP17.45■□□□□ 0.38
PRKCSH-208ENST00000589126 NLRP3Q96P20 1036 aa17.45■□□□□ 0.38
PRKCSH-208ENST00000589126 CRAMP1Q96RY5 1269 aa17.45■□□□□ 0.38
PRKCSH-208ENST00000589126 RIC3Q7Z5B4 369 aa17.44■□□□□ 0.38
PRKCSH-208ENST00000589126 RBM17Q96I25 401 aaKnown RBP17.44■□□□□ 0.38
PRKCSH-208ENST00000589126 SH3TC1Q8TE82 1336 aa17.44■□□□□ 0.38
PRKCSH-208ENST00000589126 DDX60Q8IY21 1712 aaKnown RBP17.44■□□□□ 0.38
PRKCSH-208ENST00000589126 FKBP4Q02790 459 aaKnown RBP eCLIP17.43■□□□□ 0.38
PRKCSH-208ENST00000589126 GOLGA2Q08379 1002 aa17.43■□□□□ 0.38
PRKCSH-208ENST00000589126 TRIM28Q13263 835 aaKnown RBP17.43■□□□□ 0.38
PRKCSH-208ENST00000589126 FAM89AQ96GI7 184 aa17.43■□□□□ 0.38
PRKCSH-208ENST00000589126 RRAGCQ9HB90 399 aa17.43■□□□□ 0.38
PRKCSH-208ENST00000589126 KDM2BQ8NHM5 1336 aa17.43■□□□□ 0.38
PRKCSH-208ENST00000589126 GLTPD2A6NH11 291 aa17.42■□□□□ 0.38
PRKCSH-208ENST00000589126 RTKN2Q8IZC4 609 aa17.42■□□□□ 0.38
PRKCSH-208ENST00000589126 ABCC4O15439 1325 aa17.42■□□□□ 0.38
PRKCSH-208ENST00000589126 G2E3Q7L622 706 aa17.41■□□□□ 0.38
PRKCSH-208ENST00000589126 MYD88Q99836 296 aa17.41■□□□□ 0.38
PRKCSH-208ENST00000589126 CHMP4AQ9BY43 222 aa17.41■□□□□ 0.38
PRKCSH-208ENST00000589126 ZNF277Q9NRM2 450 aaPredicted RBP17.41■□□□□ 0.38
PRKCSH-208ENST00000589126 PPEF1O14829 653 aaPredicted RBP17.4■□□□□ 0.38
PRKCSH-208ENST00000589126 VAMP4O75379 141 aa17.4■□□□□ 0.38
PRKCSH-208ENST00000589126 EXOSC9Q06265 439 aaKnown RBP17.4■□□□□ 0.38
PRKCSH-208ENST00000589126 RTL5Q5HYW3 569 aaPredicted RBP17.4■□□□□ 0.38
PRKCSH-208ENST00000589126 METTL22Q9BUU2 404 aaPredicted RBP17.4■□□□□ 0.38
PRKCSH-208ENST00000589126 ZNF521Q96K83 1311 aa17.4■□□□□ 0.38
PRKCSH-208ENST00000589126 TOMM70O94826 608 aa17.39■□□□□ 0.37
PRKCSH-208ENST00000589126 CC2D2BQ6DHV5 1058 aa17.39■□□□□ 0.37
PRKCSH-208ENST00000589126 PSMD1Q99460 953 aa17.39■□□□□ 0.37
PRKCSH-208ENST00000589126 STK31Q9BXU1 1019 aa17.39■□□□□ 0.37
PRKCSH-208ENST00000589126 MAP3K2Q9Y2U5 619 aa17.39■□□□□ 0.37
PRKCSH-208ENST00000589126 TAF1P21675 1872 aa17.39■□□□□ 0.37
PRKCSH-208ENST00000589126 PI4KAP2A4QPH2 592 aa17.38■□□□□ 0.37
PRKCSH-208ENST00000589126 POTECB2RU33 542 aa17.38■□□□□ 0.37
PRKCSH-208ENST00000589126 DDX58O95786 925 aaKnown RBP17.38■□□□□ 0.37
PRKCSH-208ENST00000589126 SLC4A2P04920 1241 aa17.38■□□□□ 0.37
PRKCSH-208ENST00000589126 KSR2Q6VAB6 950 aa17.38■□□□□ 0.37
PRKCSH-208ENST00000589126 PI4KAP1Q8N8J0 262 aa17.38■□□□□ 0.37
PRKCSH-208ENST00000589126 COL4A1P02462 1669 aa17.38■□□□□ 0.37
PRKCSH-208ENST00000589126 COL4A5P29400 1685 aa17.37■□□□□ 0.37
PRKCSH-208ENST00000589126 IARSP41252 1262 aaKnown RBP17.37■□□□□ 0.37
PRKCSH-208ENST00000589126 ZBTB38Q8NAP3 1195 aaPredicted RBP17.37■□□□□ 0.37
PRKCSH-208ENST00000589126 CCDC191Q8NCU4 936 aa17.37■□□□□ 0.37
PRKCSH-208ENST00000589126 ATP6V0A2Q9Y487 856 aa17.37■□□□□ 0.37
PRKCSH-208ENST00000589126 WDR90Q96KV7 1748 aa17.37■□□□□ 0.37
PRKCSH-208ENST00000589126 IRS4O14654 1257 aaPredicted RBP17.36■□□□□ 0.37
PRKCSH-208ENST00000589126 DDNO94850 711 aaPredicted RBP17.36■□□□□ 0.37
PRKCSH-208ENST00000589126 IGKV5-2P06315 115 aa17.36■□□□□ 0.37
PRKCSH-208ENST00000589126 SF3B3Q15393 1217 aaKnown RBP17.36■□□□□ 0.37
PRKCSH-208ENST00000589126 DPY19L2Q6NUT2 758 aa17.36■□□□□ 0.37
PRKCSH-208ENST00000589126 DDX46Q7L014 1031 aaKnown RBP17.36■□□□□ 0.37
PRKCSH-208ENST00000589126 JARID2Q92833 1246 aaPredicted RBP17.36■□□□□ 0.37
PRKCSH-208ENST00000589126 MYH16Q9H6N6 1097 aa17.36■□□□□ 0.37
PRKCSH-208ENST00000589126 BBOX1O75936 387 aa17.35■□□□□ 0.37
PRKCSH-208ENST00000589126 FLIIQ13045 1269 aa17.35■□□□□ 0.37
PRKCSH-208ENST00000589126 GRAPQ13588 217 aa17.35■□□□□ 0.37
PRKCSH-208ENST00000589126 RBM46Q8TBY0 533 aaKnown RBP17.35■□□□□ 0.37
PRKCSH-208ENST00000589126 GRAPLQ8TC17 118 aaPredicted RBP17.35■□□□□ 0.37
PRKCSH-208ENST00000589126 CWC25Q9NXE8 425 aaPredicted RBP17.35■□□□□ 0.37
PRKCSH-208ENST00000589126 ZNF541Q9H0D2 1346 aa17.35■□□□□ 0.37
PRKCSH-208ENST00000589126 PCCAP05165 728 aaPredicted RBP17.34■□□□□ 0.37
PRKCSH-208ENST00000589126 VEGFAP15692 232 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms