RNA–Protein interactions for RNA: ENST00000588961.1

KDM4B-207, Transcript of lysine demethylase 4B, humanhuman

TSL 4

Gene KDM4B, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-207ENST00000588961 LRP10Q7Z4F1 713 aa10.94□□□□□ -0.66
KDM4B-207ENST00000588961 DDX21Q9NR30 783 aaKnown RBP eCLIP10.94□□□□□ -0.66
KDM4B-207ENST00000588961 ZBTB40Q9NUA8 1239 aa10.94□□□□□ -0.66
KDM4B-207ENST00000588961 PARP3Q9Y6F1 533 aa10.94□□□□□ -0.66
KDM4B-207ENST00000588961 COL24A1Q17RW2 1714 aa10.94□□□□□ -0.66
KDM4B-207ENST00000588961 TM4SF1P30408 202 aa10.93□□□□□ -0.66
KDM4B-207ENST00000588961 DDR1Q08345 913 aa10.93□□□□□ -0.66
KDM4B-207ENST00000588961 NFIXQ14938 502 aa10.93□□□□□ -0.66
KDM4B-207ENST00000588961 COPS6Q7L5N1 327 aa10.93□□□□□ -0.66
KDM4B-207ENST00000588961 MRPL50Q8N5N7 158 aaKnown RBP10.93□□□□□ -0.66
KDM4B-207ENST00000588961 XAGE3Q8WTP9 111 aa10.93□□□□□ -0.66
KDM4B-207ENST00000588961 FHDC1Q9C0D6 1143 aaPredicted RBP10.93□□□□□ -0.66
KDM4B-207ENST00000588961 ZBTB3Q9H5J0 574 aa10.93□□□□□ -0.66
KDM4B-207ENST00000588961 DBF4Q9UBU7 674 aaPredicted RBP10.93□□□□□ -0.66
KDM4B-207ENST00000588961 NOB1Q9ULX3 412 aaKnown RBP10.93□□□□□ -0.66
KDM4B-207ENST00000588961 IGHDP01880 384 aa10.92□□□□□ -0.66
KDM4B-207ENST00000588961 RLBP1P12271 317 aa10.92□□□□□ -0.66
KDM4B-207ENST00000588961 CCDC30Q5VVM6 783 aa10.92□□□□□ -0.66
KDM4B-207ENST00000588961 KIF6Q6ZMV9 814 aa10.92□□□□□ -0.66
KDM4B-207ENST00000588961 SMC5Q8IY18 1101 aa10.92□□□□□ -0.66
KDM4B-207ENST00000588961 PHAXQ9H814 394 aaKnown RBP10.92□□□□□ -0.66
KDM4B-207ENST00000588961 PTPRCP08575 1304 aa10.91□□□□□ -0.66
KDM4B-207ENST00000588961 MAP3K15Q6ZN16 1313 aa10.91□□□□□ -0.66
KDM4B-207ENST00000588961 POLRMTO00411 1230 aaKnown RBP10.91□□□□□ -0.66
KDM4B-207ENST00000588961 CHADLQ6NUI6 762 aa10.91□□□□□ -0.66
KDM4B-207ENST00000588961 SYT17Q9BSW7 474 aa10.91□□□□□ -0.66
KDM4B-207ENST00000588961 HYPKQ9NX55 129 aa10.91□□□□□ -0.66
KDM4B-207ENST00000588961 ZBTB47Q9UFB7 747 aaPredicted RBP10.91□□□□□ -0.66
KDM4B-207ENST00000588961 PCDHB15Q9Y5E8 787 aa10.91□□□□□ -0.66
KDM4B-207ENST00000588961 SCN7AQ01118 1682 aa10.9□□□□□ -0.66
KDM4B-207ENST00000588961 FAM177BA6PVY3 158 aa10.9□□□□□ -0.66
KDM4B-207ENST00000588961 ERVV-1B6SEH8 477 aa10.9□□□□□ -0.66
KDM4B-207ENST00000588961 SERPINB2P05120 415 aa10.9□□□□□ -0.66
KDM4B-207ENST00000588961 ERICH6Q7L0X2 663 aa10.9□□□□□ -0.66
KDM4B-207ENST00000588961 CCDC24Q8N4L8 307 aa10.9□□□□□ -0.66
KDM4B-207ENST00000588961 NLGN2Q8NFZ4 835 aa10.9□□□□□ -0.66
KDM4B-207ENST00000588961 GCC1Q96CN9 775 aa10.9□□□□□ -0.66
KDM4B-207ENST00000588961 SETDB2Q96T68 719 aa10.9□□□□□ -0.66
KDM4B-207ENST00000588961 STK31Q9BXU1 1019 aa10.9□□□□□ -0.66
KDM4B-207ENST00000588961 ZNF652Q9Y2D9 606 aa10.9□□□□□ -0.66
KDM4B-207ENST00000588961 BCORQ6W2J9 1755 aa10.9□□□□□ -0.67
KDM4B-207ENST00000588961 ZBTB7BO15156 539 aaPredicted RBP10.89□□□□□ -0.67
KDM4B-207ENST00000588961 GPTP24298 496 aa10.89□□□□□ -0.67
KDM4B-207ENST00000588961 CLEC4GQ6UXB4 293 aa10.89□□□□□ -0.67
KDM4B-207ENST00000588961 ANKRD13DQ6ZTN6 518 aa10.89□□□□□ -0.67
KDM4B-207ENST00000588961 G2E3Q7L622 706 aa10.89□□□□□ -0.67
KDM4B-207ENST00000588961 FBXO3Q9UK99 471 aa10.89□□□□□ -0.67
KDM4B-207ENST00000588961 NIP7Q9Y221 180 aaKnown RBP eCLIP10.89□□□□□ -0.67
KDM4B-207ENST00000588961 NOP58Q9Y2X3 529 aaKnown RBP10.89□□□□□ -0.67
KDM4B-207ENST00000588961 ABCC4O15439 1325 aa10.88□□□□□ -0.67
KDM4B-207ENST00000588961 C8orf34Q49A92 452 aa10.88□□□□□ -0.67
KDM4B-207ENST00000588961 INTS3Q68E01 1043 aaKnown RBP10.88□□□□□ -0.67
KDM4B-207ENST00000588961 GIGYF2Q6Y7W6 1299 aaKnown RBP10.88□□□□□ -0.67
KDM4B-207ENST00000588961 CD2APQ9Y5K6 639 aa10.88□□□□□ -0.67
KDM4B-207ENST00000588961 NPHP1O15259 732 aa10.87□□□□□ -0.67
KDM4B-207ENST00000588961 RIC3Q7Z5B4 369 aa10.87□□□□□ -0.67
KDM4B-207ENST00000588961 ITPRIPQ8IWB1 547 aa10.87□□□□□ -0.67
KDM4B-207ENST00000588961 ZNF34Q8IZ26 560 aa10.87□□□□□ -0.67
KDM4B-207ENST00000588961 TMEM57Q8N5G2 664 aa10.87□□□□□ -0.67
KDM4B-207ENST00000588961 PLBD2Q8NHP8 589 aa10.87□□□□□ -0.67
KDM4B-207ENST00000588961 WWC3Q9ULE0 1092 aa10.87□□□□□ -0.67
KDM4B-207ENST00000588961 CARMIL3Q8ND23 1372 aa10.87□□□□□ -0.67
KDM4B-207ENST00000588961 NUP98P52948 1817 aa10.86□□□□□ -0.67
KDM4B-207ENST00000588961 A0A0G2JLW4 131 aa10.86□□□□□ -0.67
KDM4B-207ENST00000588961 TCIRG1Q13488 830 aa10.86□□□□□ -0.67
KDM4B-207ENST00000588961 SUSD4Q5VX71 490 aa10.86□□□□□ -0.67
KDM4B-207ENST00000588961 PRR5LQ6MZQ0 368 aa10.86□□□□□ -0.67
KDM4B-207ENST00000588961 NBPF5PQ86XG9 351 aaPredicted RBP10.86□□□□□ -0.67
KDM4B-207ENST00000588961 RPAP2Q8IXW5 612 aaPredicted RBP10.86□□□□□ -0.67
KDM4B-207ENST00000588961 BCL2L13Q9BXK5 485 aa10.86□□□□□ -0.67
KDM4B-207ENST00000588961 AFDNP55196 1824 aaKnown RBP10.86□□□□□ -0.67
KDM4B-207ENST00000588961 UBN2Q6ZU65 1347 aa10.85□□□□□ -0.67
KDM4B-207ENST00000588961 ATP5J2-PTCD1G3V325 749 aa10.85□□□□□ -0.67
KDM4B-207ENST00000588961 RGL2O15211 777 aa10.85□□□□□ -0.67
KDM4B-207ENST00000588961 CNBD1Q8NA66 436 aa10.85□□□□□ -0.67
KDM4B-207ENST00000588961 MYD88Q99836 296 aa10.85□□□□□ -0.67
KDM4B-207ENST00000588961 CREBZFQ9NS37 354 aa10.85□□□□□ -0.67
KDM4B-207ENST00000588961 PDZRN3Q9UPQ7 1066 aa10.85□□□□□ -0.67
KDM4B-207ENST00000588961 MAP3K2Q9Y2U5 619 aa10.85□□□□□ -0.67
KDM4B-207ENST00000588961 C10orf71Q711Q0 1435 aa10.84□□□□□ -0.67
KDM4B-207ENST00000588961 ATP10DQ9P241 1426 aa10.84□□□□□ -0.67
KDM4B-207ENST00000588961 PI4KAP2A4QPH2 592 aa10.84□□□□□ -0.67
KDM4B-207ENST00000588961 DDX58O95786 925 aaKnown RBP10.84□□□□□ -0.67
KDM4B-207ENST00000588961 DPEP1P16444 411 aa10.84□□□□□ -0.67
KDM4B-207ENST00000588961 GTF2E1P29083 439 aaPredicted RBP10.84□□□□□ -0.67
KDM4B-207ENST00000588961 CHRNA5P30532 468 aa10.84□□□□□ -0.67
KDM4B-207ENST00000588961 FLIIQ13045 1269 aa10.84□□□□□ -0.67
KDM4B-207ENST00000588961 HSP90AB3PQ58FF7 597 aa10.84□□□□□ -0.67
KDM4B-207ENST00000588961 KSR2Q6VAB6 950 aa10.84□□□□□ -0.67
KDM4B-207ENST00000588961 TPTE2Q6XPS3 522 aa10.84□□□□□ -0.67
KDM4B-207ENST00000588961 NUTM1Q86Y26 1132 aa10.84□□□□□ -0.67
KDM4B-207ENST00000588961 PI4KAP1Q8N8J0 262 aa10.84□□□□□ -0.67
KDM4B-207ENST00000588961 UPF2Q9HAU5 1272 aaKnown RBP10.84□□□□□ -0.67
KDM4B-207ENST00000588961 CACNA1FO60840 1977 aa10.84□□□□□ -0.67
KDM4B-207ENST00000588961 NRXN2Q9P2S2 1712 aa10.84□□□□□ -0.67
KDM4B-207ENST00000588961 ADCY9O60503 1353 aa10.83□□□□□ -0.68
KDM4B-207ENST00000588961 TGFB2P61812 414 aa10.83□□□□□ -0.68
KDM4B-207ENST00000588961 ST5P78524 1137 aa10.83□□□□□ -0.68
KDM4B-207ENST00000588961 NUCB1Q02818 461 aa10.83□□□□□ -0.68
KDM4B-207ENST00000588961 FKBP5Q13451 457 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms