RNA–Protein interactions for RNA: ENST00000588749.1

CACTIN-206, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 3

Gene CACTIN, Length 391 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-206ENST00000588749 NFKBIEO00221 500 aa18.7■□□□□ 0.58
CACTIN-206ENST00000588749 CCDC30Q5VVM6 783 aa18.7■□□□□ 0.58
CACTIN-206ENST00000588749 NLRP10Q86W26 655 aa18.7■□□□□ 0.58
CACTIN-206ENST00000588749 CHMP4AQ9BY43 222 aa18.7■□□□□ 0.58
CACTIN-206ENST00000588749 PHAXQ9H814 394 aaKnown RBP18.7■□□□□ 0.58
CACTIN-206ENST00000588749 FER1L6Q2WGJ9 1857 aa18.69■□□□□ 0.58
CACTIN-206ENST00000588749 CCDC88AQ3V6T2 1871 aa18.69■□□□□ 0.58
CACTIN-206ENST00000588749 GOLGA2Q08379 1002 aa18.69■□□□□ 0.58
CACTIN-206ENST00000588749 TWISTNBQ3B726 338 aaPredicted RBP18.69■□□□□ 0.58
CACTIN-206ENST00000588749 CRY2Q49AN0 593 aa18.69■□□□□ 0.58
CACTIN-206ENST00000588749 ZNF428Q96B54 188 aa18.68■□□□□ 0.58
CACTIN-206ENST00000588749 RNF123Q5XPI4 1314 aa18.68■□□□□ 0.58
CACTIN-206ENST00000588749 TCERG1O14776 1098 aaKnown RBP18.67■□□□□ 0.58
CACTIN-206ENST00000588749 LMNB1P20700 586 aa18.67■□□□□ 0.58
CACTIN-206ENST00000588749 PRELPP51888 382 aa18.67■□□□□ 0.58
CACTIN-206ENST00000588749 C3orf67Q6ZVT6 689 aa18.67■□□□□ 0.58
CACTIN-206ENST00000588749 RIC3Q7Z5B4 369 aa18.67■□□□□ 0.58
CACTIN-206ENST00000588749 RPGRQ92834 1020 aaKnown RBP18.67■□□□□ 0.58
CACTIN-206ENST00000588749 TRMT112Q9UI30 125 aaKnown RBP18.67■□□□□ 0.58
CACTIN-206ENST00000588749 ATP5J2-PTCD1G3V325 749 aa18.66■□□□□ 0.58
CACTIN-206ENST00000588749 ALDH1B1P30837 517 aa18.66■□□□□ 0.58
CACTIN-206ENST00000588749 SOGA3Q5TF21 947 aa18.66■□□□□ 0.58
CACTIN-206ENST00000588749 ISCA1Q9BUE6 129 aa18.66■□□□□ 0.58
CACTIN-206ENST00000588749 STK31Q9BXU1 1019 aa18.66■□□□□ 0.58
CACTIN-206ENST00000588749 SH3TC1Q8TE82 1336 aa18.66■□□□□ 0.58
CACTIN-206ENST00000588749 TIAM2Q8IVF5 1701 aa18.66■□□□□ 0.58
CACTIN-206ENST00000588749 CCDC93Q567U6 631 aa18.65■□□□□ 0.58
CACTIN-206ENST00000588749 SYNE4Q8N205 404 aa18.65■□□□□ 0.58
CACTIN-206ENST00000588749 C7orf43Q8WVR3 580 aa18.65■□□□□ 0.58
CACTIN-206ENST00000588749 NLRP3Q96P20 1036 aa18.65■□□□□ 0.58
CACTIN-206ENST00000588749 TAOK3Q9H2K8 898 aa18.65■□□□□ 0.58
CACTIN-206ENST00000588749 SPINK5Q9NQ38 1064 aaPredicted RBP18.65■□□□□ 0.58
CACTIN-206ENST00000588749 LAMB2P55268 1798 aa18.65■□□□□ 0.58
CACTIN-206ENST00000588749 HCLS1P14317 486 aaPredicted RBP18.64■□□□□ 0.57
CACTIN-206ENST00000588749 HOXA10P31260 410 aaPredicted RBP18.64■□□□□ 0.57
CACTIN-206ENST00000588749 SLC10A5Q5PT55 438 aa18.64■□□□□ 0.57
CACTIN-206ENST00000588749 OLFM4Q6UX06 510 aa18.64■□□□□ 0.57
CACTIN-206ENST00000588749 CCER2I3L3R5 266 aa18.63■□□□□ 0.57
CACTIN-206ENST00000588749 DDX58O95786 925 aaKnown RBP18.63■□□□□ 0.57
CACTIN-206ENST00000588749 EXOSC9Q06265 439 aaKnown RBP18.63■□□□□ 0.57
CACTIN-206ENST00000588749 RBM17Q96I25 401 aaKnown RBP18.63■□□□□ 0.57
CACTIN-206ENST00000588749 MYH16Q9H6N6 1097 aa18.63■□□□□ 0.57
CACTIN-206ENST00000588749 LTBP3Q9NS15 1303 aa18.63■□□□□ 0.57
CACTIN-206ENST00000588749 DICER1Q9UPY3 1922 aaKnown RBP18.62■□□□□ 0.57
CACTIN-206ENST00000588749 MYD88Q99836 296 aa18.62■□□□□ 0.57
CACTIN-206ENST00000588749 ZNF521Q96K83 1311 aa18.62■□□□□ 0.57
CACTIN-206ENST00000588749 ZC3H4Q9UPT8 1303 aaKnown RBP18.62■□□□□ 0.57
CACTIN-206ENST00000588749 DDX60Q8IY21 1712 aaKnown RBP18.62■□□□□ 0.57
CACTIN-206ENST00000588749 SLC4A2P04920 1241 aa18.61■□□□□ 0.57
CACTIN-206ENST00000588749 C1QTNF8P60827 252 aa18.61■□□□□ 0.57
CACTIN-206ENST00000588749 TRIM28Q13263 835 aaKnown RBP18.61■□□□□ 0.57
CACTIN-206ENST00000588749 FAM89AQ96GI7 184 aa18.61■□□□□ 0.57
CACTIN-206ENST00000588749 CRAMP1Q96RY5 1269 aa18.61■□□□□ 0.57
CACTIN-206ENST00000588749 CACNA1FO60840 1977 aa18.61■□□□□ 0.57
CACTIN-206ENST00000588749 RTL5Q5HYW3 569 aaPredicted RBP18.6■□□□□ 0.57
CACTIN-206ENST00000588749 G2E3Q7L622 706 aa18.6■□□□□ 0.57
CACTIN-206ENST00000588749 NMRK2Q9NPI5 230 aa18.6■□□□□ 0.57
CACTIN-206ENST00000588749 MAP3K2Q9Y2U5 619 aa18.6■□□□□ 0.57
CACTIN-206ENST00000588749 ABCC4O15439 1325 aa18.59■□□□□ 0.57
CACTIN-206ENST00000588749 KDM2BQ8NHM5 1336 aa18.59■□□□□ 0.57
CACTIN-206ENST00000588749 PI4KAP2A4QPH2 592 aa18.59■□□□□ 0.57
CACTIN-206ENST00000588749 KIF3CO14782 793 aa18.59■□□□□ 0.57
CACTIN-206ENST00000588749 PPEF1O14829 653 aaPredicted RBP18.59■□□□□ 0.57
CACTIN-206ENST00000588749 VAMP4O75379 141 aa18.59■□□□□ 0.57
CACTIN-206ENST00000588749 FKBP4Q02790 459 aaKnown RBP eCLIP18.59■□□□□ 0.57
CACTIN-206ENST00000588749 KSR2Q6VAB6 950 aa18.59■□□□□ 0.57
CACTIN-206ENST00000588749 RTKN2Q8IZC4 609 aa18.59■□□□□ 0.57
CACTIN-206ENST00000588749 PI4KAP1Q8N8J0 262 aa18.59■□□□□ 0.57
CACTIN-206ENST00000588749 METTL22Q9BUU2 404 aaPredicted RBP18.59■□□□□ 0.57
CACTIN-206ENST00000588749 SLC51AQ86UW1 340 aa18.58■□□□□ 0.56
CACTIN-206ENST00000588749 SNED1Q8TER0 1413 aa18.57■□□□□ 0.56
CACTIN-206ENST00000588749 FLIIQ13045 1269 aa18.57■□□□□ 0.56
CACTIN-206ENST00000588749 CC2D2BQ6DHV5 1058 aa18.57■□□□□ 0.56
CACTIN-206ENST00000588749 CCDC191Q8NCU4 936 aa18.57■□□□□ 0.56
CACTIN-206ENST00000588749 ZNF277Q9NRM2 450 aaPredicted RBP18.57■□□□□ 0.56
CACTIN-206ENST00000588749 CWC25Q9NXE8 425 aaPredicted RBP18.57■□□□□ 0.56
CACTIN-206ENST00000588749 TAF1P21675 1872 aa18.56■□□□□ 0.56
CACTIN-206ENST00000588749 IRS4O14654 1257 aaPredicted RBP18.56■□□□□ 0.56
CACTIN-206ENST00000588749 DIEXFQ68CQ4 756 aaKnown RBP18.56■□□□□ 0.56
CACTIN-206ENST00000588749 DDX46Q7L014 1031 aaKnown RBP18.56■□□□□ 0.56
CACTIN-206ENST00000588749 ZBTB38Q8NAP3 1195 aaPredicted RBP18.56■□□□□ 0.56
CACTIN-206ENST00000588749 GLTPD2A6NH11 291 aa18.55■□□□□ 0.56
CACTIN-206ENST00000588749 NEXNQ0ZGT2 675 aa18.55■□□□□ 0.56
CACTIN-206ENST00000588749 FKBP5Q13451 457 aaPredicted RBP18.55■□□□□ 0.56
CACTIN-206ENST00000588749 PCCAP05165 728 aaPredicted RBP18.54■□□□□ 0.56
CACTIN-206ENST00000588749 IGKV5-2P06315 115 aa18.54■□□□□ 0.56
CACTIN-206ENST00000588749 GRAPQ13588 217 aa18.54■□□□□ 0.56
CACTIN-206ENST00000588749 GRAPLQ8TC17 118 aaPredicted RBP18.54■□□□□ 0.56
CACTIN-206ENST00000588749 JARID2Q92833 1246 aaPredicted RBP18.54■□□□□ 0.56
CACTIN-206ENST00000588749 TMX4Q9H1E5 349 aaPredicted RBP18.54■□□□□ 0.56
CACTIN-206ENST00000588749 E9PSI1 815 aa18.53■□□□□ 0.56
CACTIN-206ENST00000588749 SF3B3Q15393 1217 aaKnown RBP18.53■□□□□ 0.56
CACTIN-206ENST00000588749 PSMD1Q99460 953 aa18.53■□□□□ 0.56
CACTIN-206ENST00000588749 RRAGCQ9HB90 399 aa18.53■□□□□ 0.56
CACTIN-206ENST00000588749 ATP6V0A2Q9Y487 856 aa18.53■□□□□ 0.56
CACTIN-206ENST00000588749 BBOX1O75936 387 aa18.52■□□□□ 0.56
CACTIN-206ENST00000588749 IARSP41252 1262 aaKnown RBP18.52■□□□□ 0.56
CACTIN-206ENST00000588749 CWF19L2Q2TBE0 894 aaKnown RBP18.52■□□□□ 0.56
CACTIN-206ENST00000588749 GRIPAP1Q4V328 841 aa18.52■□□□□ 0.56
CACTIN-206ENST00000588749 DPY19L2Q6NUT2 758 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms