RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 NECTIN2Q92692 538 aa18.61■□□□□ 0.57
ERCC1-205ENST00000587888 CAPN15O75808 1086 aa18.6■□□□□ 0.57
ERCC1-205ENST00000587888 ANXA1P04083 346 aa18.6■□□□□ 0.57
ERCC1-205ENST00000587888 HOXA10P31260 410 aaPredicted RBP18.6■□□□□ 0.57
ERCC1-205ENST00000587888 EPHX2P34913 555 aa18.6■□□□□ 0.57
ERCC1-205ENST00000587888 PDIA6Q15084 440 aa18.6■□□□□ 0.57
ERCC1-205ENST00000587888 RALBP1Q15311 655 aa18.6■□□□□ 0.57
ERCC1-205ENST00000587888 NEUROD2Q15784 382 aa18.6■□□□□ 0.57
ERCC1-205ENST00000587888 TNS4Q8IZW8 715 aa18.6■□□□□ 0.57
ERCC1-205ENST00000587888 PSMD1Q99460 953 aa18.6■□□□□ 0.57
ERCC1-205ENST00000587888 ERBB4Q15303 1308 aa18.59■□□□□ 0.57
ERCC1-205ENST00000587888 RNF123Q5XPI4 1314 aa18.59■□□□□ 0.57
ERCC1-205ENST00000587888 SCN4AP35499 1836 aa18.59■□□□□ 0.57
ERCC1-205ENST00000587888 NTSR2O95665 410 aa18.59■□□□□ 0.57
ERCC1-205ENST00000587888 TMPOP42166 694 aaKnown RBP18.59■□□□□ 0.57
ERCC1-205ENST00000587888 PROSER3Q2NL68 480 aa18.59■□□□□ 0.57
ERCC1-205ENST00000587888 CC2D2BQ6DHV5 1058 aa18.59■□□□□ 0.57
ERCC1-205ENST00000587888 C3orf67Q6ZVT6 689 aa18.59■□□□□ 0.57
ERCC1-205ENST00000587888 SLC51AQ86UW1 340 aa18.59■□□□□ 0.57
ERCC1-205ENST00000587888 GJA3Q9Y6H8 435 aa18.59■□□□□ 0.57
ERCC1-205ENST00000587888 ITGBL1O95965 494 aaPredicted RBP18.58■□□□□ 0.56
ERCC1-205ENST00000587888 EIF6P56537 245 aaKnown RBP18.58■□□□□ 0.56
ERCC1-205ENST00000587888 AIMP1Q12904 312 aaKnown RBP18.58■□□□□ 0.56
ERCC1-205ENST00000587888 CCDC146Q8IYE0 955 aa18.58■□□□□ 0.56
ERCC1-205ENST00000587888 GPC2Q8N158 579 aa18.58■□□□□ 0.56
ERCC1-205ENST00000587888 NLRP3Q96P20 1036 aa18.58■□□□□ 0.56
ERCC1-205ENST00000587888 CRAMP1Q96RY5 1269 aa18.58■□□□□ 0.56
ERCC1-205ENST00000587888 PASKQ96RG2 1323 aa18.57■□□□□ 0.56
ERCC1-205ENST00000587888 PPEF1O14829 653 aaPredicted RBP18.57■□□□□ 0.56
ERCC1-205ENST00000587888 DDX10Q13206 875 aaKnown RBP18.57■□□□□ 0.56
ERCC1-205ENST00000587888 PARP10Q53GL7 1025 aa18.57■□□□□ 0.56
ERCC1-205ENST00000587888 MAP1SQ66K74 1059 aaPredicted RBP18.57■□□□□ 0.56
ERCC1-205ENST00000587888 LRP10Q7Z4F1 713 aa18.57■□□□□ 0.56
ERCC1-205ENST00000587888 PNMA8AQ86V59 439 aaPredicted RBP18.57■□□□□ 0.56
ERCC1-205ENST00000587888 LARGE2Q8N3Y3 721 aa18.57■□□□□ 0.56
ERCC1-205ENST00000587888 UTP14AQ9BVJ6 771 aaKnown RBP18.57■□□□□ 0.56
ERCC1-205ENST00000587888 LAS1LQ9Y4W2 734 aaKnown RBP18.57■□□□□ 0.56
ERCC1-205ENST00000587888 LMOD3Q0VAK6 560 aa18.56■□□□□ 0.56
ERCC1-205ENST00000587888 COPS6Q7L5N1 327 aa18.56■□□□□ 0.56
ERCC1-205ENST00000587888 BABAM1Q9NWV8 329 aa18.56■□□□□ 0.56
ERCC1-205ENST00000587888 IBTKQ9P2D0 1353 aaPredicted RBP18.55■□□□□ 0.56
ERCC1-205ENST00000587888 TMEM88BA6NKF7 163 aa18.55■□□□□ 0.56
ERCC1-205ENST00000587888 GRIPAP1Q4V328 841 aa18.55■□□□□ 0.56
ERCC1-205ENST00000587888 CNTROBQ8N137 903 aa18.55■□□□□ 0.56
ERCC1-205ENST00000587888 XAGE3Q8WTP9 111 aa18.55■□□□□ 0.56
ERCC1-205ENST00000587888 TMX4Q9H1E5 349 aaPredicted RBP18.55■□□□□ 0.56
ERCC1-205ENST00000587888 SLC10A5Q5PT55 438 aa18.54■□□□□ 0.56
ERCC1-205ENST00000587888 ZNF428Q96B54 188 aa18.54■□□□□ 0.56
ERCC1-205ENST00000587888 SNED1Q8TER0 1413 aa18.54■□□□□ 0.56
ERCC1-205ENST00000587888 LMOD1P29536 600 aaPredicted RBP18.53■□□□□ 0.56
ERCC1-205ENST00000587888 KRT24Q2M2I5 525 aa18.53■□□□□ 0.56
ERCC1-205ENST00000587888 RIC1Q4ADV7 1423 aa18.53■□□□□ 0.56
ERCC1-205ENST00000587888 CNTNAP1P78357 1384 aa18.53■□□□□ 0.56
ERCC1-205ENST00000587888 HCLS1P14317 486 aaPredicted RBP18.52■□□□□ 0.56
ERCC1-205ENST00000587888 EPS15P42566 896 aa18.52■□□□□ 0.56
ERCC1-205ENST00000587888 VEGFBP49765 207 aa18.52■□□□□ 0.56
ERCC1-205ENST00000587888 AOC3Q16853 763 aa18.52■□□□□ 0.56
ERCC1-205ENST00000587888 NIM1KQ8IY84 436 aa18.52■□□□□ 0.56
ERCC1-205ENST00000587888 ATP6V0A2Q9Y487 856 aa18.52■□□□□ 0.56
ERCC1-205ENST00000587888 COL4A5P29400 1685 aa18.52■□□□□ 0.56
ERCC1-205ENST00000587888 CHL1O00533 1208 aa18.51■□□□□ 0.55
ERCC1-205ENST00000587888 PPIP5K2O43314 1243 aa18.51■□□□□ 0.55
ERCC1-205ENST00000587888 NLRP10Q86W26 655 aa18.51■□□□□ 0.55
ERCC1-205ENST00000587888 TRMT112Q9UI30 125 aaKnown RBP18.51■□□□□ 0.55
ERCC1-205ENST00000587888 ABCC4O15439 1325 aa18.5■□□□□ 0.55
ERCC1-205ENST00000587888 MYBBP1AQ9BQG0 1328 aaKnown RBP18.5■□□□□ 0.55
ERCC1-205ENST00000587888 TCIRG1Q13488 830 aa18.5■□□□□ 0.55
ERCC1-205ENST00000587888 WDR43Q15061 677 aaKnown RBP eCLIP18.5■□□□□ 0.55
ERCC1-205ENST00000587888 DEFB115Q30KQ5 88 aa18.5■□□□□ 0.55
ERCC1-205ENST00000587888 HSP90AB3PQ58FF7 597 aa18.5■□□□□ 0.55
ERCC1-205ENST00000587888 RUNDC1Q96C34 613 aa18.5■□□□□ 0.55
ERCC1-205ENST00000587888 DDX21Q9NR30 783 aaKnown RBP eCLIP18.5■□□□□ 0.55
ERCC1-205ENST00000587888 TRIM35Q9UPQ4 493 aa18.5■□□□□ 0.55
ERCC1-205ENST00000587888 FOXN1O15353 648 aa18.49■□□□□ 0.55
ERCC1-205ENST00000587888 BBOX1O75936 387 aa18.49■□□□□ 0.55
ERCC1-205ENST00000587888 SCNN1DP51172 638 aa18.49■□□□□ 0.55
ERCC1-205ENST00000587888 ABT1Q9ULW3 272 aaKnown RBP18.49■□□□□ 0.55
ERCC1-205ENST00000587888 FMR1Q06787 632 aaKnown RBP eCLIP18.48■□□□□ 0.55
ERCC1-205ENST00000587888 DPP8Q6V1X1 898 aaPredicted RBP18.48■□□□□ 0.55
ERCC1-205ENST00000587888 DDX46Q7L014 1031 aaKnown RBP18.48■□□□□ 0.55
ERCC1-205ENST00000587888 SP8Q8IXZ3 490 aa18.48■□□□□ 0.55
ERCC1-205ENST00000587888 SUPT20HQ8NEM7 779 aa18.48■□□□□ 0.55
ERCC1-205ENST00000587888 CHPF2Q9P2E5 772 aa18.48■□□□□ 0.55
ERCC1-205ENST00000587888 ADAMTS8Q9UP79 889 aa18.48■□□□□ 0.55
ERCC1-205ENST00000587888 ADAMTSL1Q8N6G6 1762 aa18.47■□□□□ 0.55
ERCC1-205ENST00000587888 HDGFL1Q5TGJ6 251 aa18.47■□□□□ 0.55
ERCC1-205ENST00000587888 MPNDQ8N594 471 aa18.47■□□□□ 0.55
ERCC1-205ENST00000587888 ZNRF3Q9ULT6 936 aa18.47■□□□□ 0.55
ERCC1-205ENST00000587888 SH3TC1Q8TE82 1336 aa18.47■□□□□ 0.55
ERCC1-205ENST00000587888 CXCL9Q07325 125 aa18.46■□□□□ 0.55
ERCC1-205ENST00000587888 USP50Q70EL3 339 aaPredicted RBP18.46■□□□□ 0.55
ERCC1-205ENST00000587888 AIDAQ96BJ3 306 aa18.46■□□□□ 0.55
ERCC1-205ENST00000587888 VPS33BQ9H267 617 aa18.46■□□□□ 0.55
ERCC1-205ENST00000587888 LTBP1Q14766 1721 aa18.46■□□□□ 0.55
ERCC1-205ENST00000587888 ANKRD13DQ6ZTN6 518 aa18.45■□□□□ 0.54
ERCC1-205ENST00000587888 RTFDC1Q9BY42 306 aaPredicted RBP18.45■□□□□ 0.54
ERCC1-205ENST00000587888 RASSF10A6NK89 507 aa18.44■□□□□ 0.54
ERCC1-205ENST00000587888 ATP5J2-PTCD1G3V325 749 aa18.44■□□□□ 0.54
ERCC1-205ENST00000587888 GRAPQ13588 217 aa18.44■□□□□ 0.54
ERCC1-205ENST00000587888 PLBD2Q8NHP8 589 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms