RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 WWC1Q8IX03 1113 aa22.91■■□□□ 1.26
TPM4-206ENST00000587201 PLBD2Q8NHP8 589 aa22.91■■□□□ 1.26
TPM4-206ENST00000587201 C7orf43Q8WVR3 580 aa22.91■■□□□ 1.26
TPM4-206ENST00000587201 RPGRQ92834 1020 aaKnown RBP22.91■■□□□ 1.26
TPM4-206ENST00000587201 RIC1Q4ADV7 1423 aa22.91■■□□□ 1.26
TPM4-206ENST00000587201 FER1L6Q2WGJ9 1857 aa22.9■■□□□ 1.26
TPM4-206ENST00000587201 ANKRD13DQ6ZTN6 518 aa22.9■■□□□ 1.26
TPM4-206ENST00000587201 NLRP10Q86W26 655 aa22.9■■□□□ 1.26
TPM4-206ENST00000587201 C8orf58Q8NAV2 365 aa22.9■■□□□ 1.26
TPM4-206ENST00000587201 NLRP3Q96P20 1036 aa22.89■■□□□ 1.25
TPM4-206ENST00000587201 RNF123Q5XPI4 1314 aa22.88■■□□□ 1.25
TPM4-206ENST00000587201 CCDC88AQ3V6T2 1871 aa22.88■■□□□ 1.25
TPM4-206ENST00000587201 TSR2Q969E8 191 aaKnown RBP22.88■■□□□ 1.25
TPM4-206ENST00000587201 RBM17Q96I25 401 aaKnown RBP22.88■■□□□ 1.25
TPM4-206ENST00000587201 ANKRD36CQ5JPF3 1778 aa22.88■■□□□ 1.25
TPM4-206ENST00000587201 NCBP3Q53F19 620 aaKnown RBP22.87■■□□□ 1.25
TPM4-206ENST00000587201 SLC10A5Q5PT55 438 aa22.87■■□□□ 1.25
TPM4-206ENST00000587201 OLFM4Q6UX06 510 aa22.87■■□□□ 1.25
TPM4-206ENST00000587201 CHMP4AQ9BY43 222 aa22.87■■□□□ 1.25
TPM4-206ENST00000587201 RRAGCQ9HB90 399 aa22.87■■□□□ 1.25
TPM4-206ENST00000587201 TRMT112Q9UI30 125 aaKnown RBP22.87■■□□□ 1.25
TPM4-206ENST00000587201 SALL2Q9Y467 1007 aaPredicted RBP22.87■■□□□ 1.25
TPM4-206ENST00000587201 TIAM2Q8IVF5 1701 aa22.86■■□□□ 1.25
TPM4-206ENST00000587201 GLTPD2A6NH11 291 aa22.86■■□□□ 1.25
TPM4-206ENST00000587201 TOMM70O94826 608 aa22.86■■□□□ 1.25
TPM4-206ENST00000587201 HOXA10P31260 410 aaPredicted RBP22.86■■□□□ 1.25
TPM4-206ENST00000587201 C3orf67Q6ZVT6 689 aa22.86■■□□□ 1.25
TPM4-206ENST00000587201 C16orf71Q8IYS4 520 aaPredicted RBP22.86■■□□□ 1.25
TPM4-206ENST00000587201 RTKN2Q8IZC4 609 aa22.86■■□□□ 1.25
TPM4-206ENST00000587201 FAM9BQ8IZU0 186 aa22.86■■□□□ 1.25
TPM4-206ENST00000587201 PHAXQ9H814 394 aaKnown RBP22.86■■□□□ 1.25
TPM4-206ENST00000587201 FKBP4Q02790 459 aaKnown RBP eCLIP22.85■■□□□ 1.25
TPM4-206ENST00000587201 GOLGA2Q08379 1002 aa22.85■■□□□ 1.25
TPM4-206ENST00000587201 CCDC30Q5VVM6 783 aa22.85■■□□□ 1.25
TPM4-206ENST00000587201 DPY19L2Q6NUT2 758 aa22.85■■□□□ 1.25
TPM4-206ENST00000587201 TSPYL6Q8N831 410 aa22.85■■□□□ 1.25
TPM4-206ENST00000587201 CRAMP1Q96RY5 1269 aa22.85■■□□□ 1.25
TPM4-206ENST00000587201 RIC3Q7Z5B4 369 aa22.84■■□□□ 1.25
TPM4-206ENST00000587201 ZNF428Q96B54 188 aa22.84■■□□□ 1.25
TPM4-206ENST00000587201 IL16Q14005 1332 aa22.83■■□□□ 1.25
TPM4-206ENST00000587201 SH3TC1Q8TE82 1336 aa22.83■■□□□ 1.25
TPM4-206ENST00000587201 ATP5J2-PTCD1G3V325 749 aa22.83■■□□□ 1.25
TPM4-206ENST00000587201 HCLS1P14317 486 aaPredicted RBP22.83■■□□□ 1.25
TPM4-206ENST00000587201 SYNE4Q8N205 404 aa22.83■■□□□ 1.25
TPM4-206ENST00000587201 ISCA1Q9BUE6 129 aa22.83■■□□□ 1.25
TPM4-206ENST00000587201 ZNF277Q9NRM2 450 aaPredicted RBP22.82■■□□□ 1.24
TPM4-206ENST00000587201 DICER1Q9UPY3 1922 aaKnown RBP22.81■■□□□ 1.24
TPM4-206ENST00000587201 TCERG1O14776 1098 aaKnown RBP22.81■■□□□ 1.24
TPM4-206ENST00000587201 PPEF1O14829 653 aaPredicted RBP22.81■■□□□ 1.24
TPM4-206ENST00000587201 CC2D2BQ6DHV5 1058 aa22.81■■□□□ 1.24
TPM4-206ENST00000587201 HSPA6P17066 643 aa22.8■■□□□ 1.24
TPM4-206ENST00000587201 TWISTNBQ3B726 338 aaPredicted RBP22.8■■□□□ 1.24
TPM4-206ENST00000587201 WDR63Q8IWG1 891 aa22.8■■□□□ 1.24
TPM4-206ENST00000587201 VEGFAP15692 232 aaPredicted RBP22.79■■□□□ 1.24
TPM4-206ENST00000587201 RBM46Q8TBY0 533 aaKnown RBP22.79■■□□□ 1.24
TPM4-206ENST00000587201 STK31Q9BXU1 1019 aa22.79■■□□□ 1.24
TPM4-206ENST00000587201 TMX4Q9H1E5 349 aaPredicted RBP22.79■■□□□ 1.24
TPM4-206ENST00000587201 DDX58O95786 925 aaKnown RBP22.78■■□□□ 1.24
TPM4-206ENST00000587201 TRIM28Q13263 835 aaKnown RBP22.78■■□□□ 1.24
TPM4-206ENST00000587201 FAM89AQ96GI7 184 aa22.78■■□□□ 1.24
TPM4-206ENST00000587201 PSMD1Q99460 953 aa22.78■■□□□ 1.24
TPM4-206ENST00000587201 ABCC4O15439 1325 aa22.78■■□□□ 1.24
TPM4-206ENST00000587201 IARSP41252 1262 aaKnown RBP22.77■■□□□ 1.24
TPM4-206ENST00000587201 GRIPAP1Q4V328 841 aa22.77■■□□□ 1.24
TPM4-206ENST00000587201 DDX46Q7L014 1031 aaKnown RBP22.77■■□□□ 1.24
TPM4-206ENST00000587201 MYD88Q99836 296 aa22.77■■□□□ 1.24
TPM4-206ENST00000587201 FANCIQ9NVI1 1328 aa22.77■■□□□ 1.24
TPM4-206ENST00000587201 SNED1Q8TER0 1413 aa22.76■■□□□ 1.23
TPM4-206ENST00000587201 RTL5Q5HYW3 569 aaPredicted RBP22.76■■□□□ 1.23
TPM4-206ENST00000587201 DDNO94850 711 aaPredicted RBP22.75■■□□□ 1.23
TPM4-206ENST00000587201 SLC51AQ86UW1 340 aa22.75■■□□□ 1.23
TPM4-206ENST00000587201 LAMB2P55268 1798 aa22.74■■□□□ 1.23
TPM4-206ENST00000587201 BBOX1O75936 387 aa22.74■■□□□ 1.23
TPM4-206ENST00000587201 METTL22Q9BUU2 404 aaPredicted RBP22.74■■□□□ 1.23
TPM4-206ENST00000587201 ATP6V0A2Q9Y487 856 aa22.74■■□□□ 1.23
TPM4-206ENST00000587201 WDR90Q96KV7 1748 aa22.74■■□□□ 1.23
TPM4-206ENST00000587201 POTECB2RU33 542 aa22.73■■□□□ 1.23
TPM4-206ENST00000587201 IRS4O14654 1257 aaPredicted RBP22.73■■□□□ 1.23
TPM4-206ENST00000587201 FSTL1Q12841 308 aa22.73■■□□□ 1.23
TPM4-206ENST00000587201 GRAPQ13588 217 aa22.73■■□□□ 1.23
TPM4-206ENST00000587201 GRAPLQ8TC17 118 aaPredicted RBP22.73■■□□□ 1.23
TPM4-206ENST00000587201 JDP2Q8WYK2 163 aa22.73■■□□□ 1.23
TPM4-206ENST00000587201 MAP3K2Q9Y2U5 619 aa22.73■■□□□ 1.23
TPM4-206ENST00000587201 SLC4A2P04920 1241 aa22.72■■□□□ 1.23
TPM4-206ENST00000587201 KSR2Q6VAB6 950 aa22.72■■□□□ 1.23
TPM4-206ENST00000587201 ZBTB38Q8NAP3 1195 aaPredicted RBP22.72■■□□□ 1.23
TPM4-206ENST00000587201 CCDC191Q8NCU4 936 aa22.72■■□□□ 1.23
TPM4-206ENST00000587201 PI4KAP2A4QPH2 592 aa22.71■■□□□ 1.23
TPM4-206ENST00000587201 EXOSC9Q06265 439 aaKnown RBP22.71■■□□□ 1.23
TPM4-206ENST00000587201 SF3B3Q15393 1217 aaKnown RBP22.71■■□□□ 1.23
TPM4-206ENST00000587201 SP8Q8IXZ3 490 aa22.71■■□□□ 1.23
TPM4-206ENST00000587201 PI4KAP1Q8N8J0 262 aa22.71■■□□□ 1.23
TPM4-206ENST00000587201 SMC1BQ8NDV3 1235 aa22.71■■□□□ 1.23
TPM4-206ENST00000587201 CWC25Q9NXE8 425 aaPredicted RBP22.71■■□□□ 1.23
TPM4-206ENST00000587201 DDX60Q8IY21 1712 aaKnown RBP22.71■■□□□ 1.23
TPM4-206ENST00000587201 FZD9O00144 591 aa22.7■■□□□ 1.22
TPM4-206ENST00000587201 LARGE2Q8N3Y3 721 aa22.7■■□□□ 1.22
TPM4-206ENST00000587201 MYH16Q9H6N6 1097 aa22.7■■□□□ 1.22
TPM4-206ENST00000587201 SPINK5Q9NQ38 1064 aaPredicted RBP22.7■■□□□ 1.22
TPM4-206ENST00000587201 ZNF541Q9H0D2 1346 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms