RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 HSP90AB3PQ58FF7 597 aa26.65■■□□□ 1.86
CIRBP-209ENST00000586555 SOGA3Q5TF21 947 aa26.65■■□□□ 1.86
CIRBP-209ENST00000586555 XAGE3Q8WTP9 111 aa26.65■■□□□ 1.86
CIRBP-209ENST00000586555 POTECB2RU33 542 aa26.64■■□□□ 1.86
CIRBP-209ENST00000586555 ELL2O00472 640 aaPredicted RBP26.64■■□□□ 1.86
CIRBP-209ENST00000586555 PARP10Q53GL7 1025 aa26.64■■□□□ 1.86
CIRBP-209ENST00000586555 WDR63Q8IWG1 891 aa26.64■■□□□ 1.86
CIRBP-209ENST00000586555 TAOK3Q9H2K8 898 aa26.64■■□□□ 1.86
CIRBP-209ENST00000586555 SALL2Q9Y467 1007 aaPredicted RBP26.64■■□□□ 1.86
CIRBP-209ENST00000586555 WDR90Q96KV7 1748 aa26.63■■□□□ 1.85
CIRBP-209ENST00000586555 ERFEQ4G0M1 354 aa26.63■■□□□ 1.85
CIRBP-209ENST00000586555 PPP1R42Q7Z4L9 355 aa26.63■■□□□ 1.85
CIRBP-209ENST00000586555 ZNF34Q8IZ26 560 aa26.63■■□□□ 1.85
CIRBP-209ENST00000586555 GPTP24298 496 aa26.62■■□□□ 1.85
CIRBP-209ENST00000586555 DPY19L2Q6NUT2 758 aa26.62■■□□□ 1.85
CIRBP-209ENST00000586555 SMC1BQ8NDV3 1235 aa26.62■■□□□ 1.85
CIRBP-209ENST00000586555 C8orf58Q8NAV2 365 aa26.61■■□□□ 1.85
CIRBP-209ENST00000586555 CCDC30Q5VVM6 783 aa26.6■■□□□ 1.85
CIRBP-209ENST00000586555 IBTKQ9P2D0 1353 aaPredicted RBP26.59■■□□□ 1.85
CIRBP-209ENST00000586555 ANKRD13DQ6ZTN6 518 aa26.59■■□□□ 1.85
CIRBP-209ENST00000586555 PLBD2Q8NHP8 589 aa26.59■■□□□ 1.85
CIRBP-209ENST00000586555 TSR2Q969E8 191 aaKnown RBP26.59■■□□□ 1.85
CIRBP-209ENST00000586555 CRY2Q49AN0 593 aa26.58■■□□□ 1.85
CIRBP-209ENST00000586555 CCDC93Q567U6 631 aa26.58■■□□□ 1.85
CIRBP-209ENST00000586555 SUSD4Q5VX71 490 aa26.58■■□□□ 1.85
CIRBP-209ENST00000586555 TCIRG1Q13488 830 aa26.57■■□□□ 1.84
CIRBP-209ENST00000586555 UBN2Q6ZU65 1347 aa26.57■■□□□ 1.84
CIRBP-209ENST00000586555 CCER2I3L3R5 266 aa26.56■■□□□ 1.84
CIRBP-209ENST00000586555 ALDH1B1P30837 517 aa26.56■■□□□ 1.84
CIRBP-209ENST00000586555 HTRA3P83110 453 aa26.56■■□□□ 1.84
CIRBP-209ENST00000586555 NUTM1Q86Y26 1132 aa26.56■■□□□ 1.84
CIRBP-209ENST00000586555 UTP14AQ9BVJ6 771 aaKnown RBP26.56■■□□□ 1.84
CIRBP-209ENST00000586555 ABCC12Q96J65 1359 aa26.56■■□□□ 1.84
CIRBP-209ENST00000586555 GOLGA2Q08379 1002 aa26.55■■□□□ 1.84
CIRBP-209ENST00000586555 STK31Q9BXU1 1019 aa26.55■■□□□ 1.84
CIRBP-209ENST00000586555 RNF123Q5XPI4 1314 aa26.55■■□□□ 1.84
CIRBP-209ENST00000586555 FKBP4Q02790 459 aaKnown RBP eCLIP26.54■■□□□ 1.84
CIRBP-209ENST00000586555 TWISTNBQ3B726 338 aaPredicted RBP26.54■■□□□ 1.84
CIRBP-209ENST00000586555 RIC1Q4ADV7 1423 aa26.54■■□□□ 1.84
CIRBP-209ENST00000586555 DDNO94850 711 aaPredicted RBP26.53■■□□□ 1.84
CIRBP-209ENST00000586555 NTSR2O95665 410 aa26.53■■□□□ 1.84
CIRBP-209ENST00000586555 OLFM4Q6UX06 510 aa26.53■■□□□ 1.84
CIRBP-209ENST00000586555 TSPYL6Q8N831 410 aa26.53■■□□□ 1.84
CIRBP-209ENST00000586555 MYH16Q9H6N6 1097 aa26.53■■□□□ 1.84
CIRBP-209ENST00000586555 DDX58O95786 925 aaKnown RBP26.52■■□□□ 1.84
CIRBP-209ENST00000586555 RIC3Q7Z5B4 369 aa26.52■■□□□ 1.84
CIRBP-209ENST00000586555 RTKN2Q8IZC4 609 aa26.52■■□□□ 1.84
CIRBP-209ENST00000586555 KLRG1Q96E93 195 aa26.52■■□□□ 1.84
CIRBP-209ENST00000586555 SNED1Q8TER0 1413 aa26.51■■□□□ 1.83
CIRBP-209ENST00000586555 FANCIQ9NVI1 1328 aa26.51■■□□□ 1.83
CIRBP-209ENST00000586555 HOXA10P31260 410 aaPredicted RBP26.51■■□□□ 1.83
CIRBP-209ENST00000586555 NLRP10Q86W26 655 aa26.51■■□□□ 1.83
CIRBP-209ENST00000586555 ANKRD36CQ5JPF3 1778 aa26.51■■□□□ 1.83
CIRBP-209ENST00000586555 RPGRQ92834 1020 aaKnown RBP26.5■■□□□ 1.83
CIRBP-209ENST00000586555 NLRP3Q96P20 1036 aa26.5■■□□□ 1.83
CIRBP-209ENST00000586555 PHAXQ9H814 394 aaKnown RBP26.5■■□□□ 1.83
CIRBP-209ENST00000586555 TRMT112Q9UI30 125 aaKnown RBP26.5■■□□□ 1.83
CIRBP-209ENST00000586555 JMYQ8N9B5 988 aa26.49■■□□□ 1.83
CIRBP-209ENST00000586555 ZNF277Q9NRM2 450 aaPredicted RBP26.49■■□□□ 1.83
CIRBP-209ENST00000586555 SLC10A5Q5PT55 438 aa26.48■■□□□ 1.83
CIRBP-209ENST00000586555 IFFO2Q5TF58 517 aa26.47■■□□□ 1.83
CIRBP-209ENST00000586555 L3MBTL3Q96JM7 780 aaPredicted RBP26.47■■□□□ 1.83
CIRBP-209ENST00000586555 SCN4AP35499 1836 aa26.46■■□□□ 1.83
CIRBP-209ENST00000586555 SH3TC1Q8TE82 1336 aa26.46■■□□□ 1.83
CIRBP-209ENST00000586555 CC2D2BQ6DHV5 1058 aa26.46■■□□□ 1.83
CIRBP-209ENST00000586555 SYNE4Q8N205 404 aa26.46■■□□□ 1.83
CIRBP-209ENST00000586555 RBM17Q96I25 401 aaKnown RBP26.46■■□□□ 1.83
CIRBP-209ENST00000586555 PSMD1Q99460 953 aa26.46■■□□□ 1.83
CIRBP-209ENST00000586555 TRIM28Q13263 835 aaKnown RBP26.45■■□□□ 1.82
CIRBP-209ENST00000586555 DIEXFQ68CQ4 756 aaKnown RBP26.45■■□□□ 1.82
CIRBP-209ENST00000586555 CRAMP1Q96RY5 1269 aa26.45■■□□□ 1.82
CIRBP-209ENST00000586555 ISCA1Q9BUE6 129 aa26.45■■□□□ 1.82
CIRBP-209ENST00000586555 ATP5J2-PTCD1G3V325 749 aa26.44■■□□□ 1.82
CIRBP-209ENST00000586555 SLC4A2P04920 1241 aa26.44■■□□□ 1.82
CIRBP-209ENST00000586555 IARSP41252 1262 aaKnown RBP26.44■■□□□ 1.82
CIRBP-209ENST00000586555 EXOSC9Q06265 439 aaKnown RBP26.44■■□□□ 1.82
CIRBP-209ENST00000586555 C3orf67Q6ZVT6 689 aa26.44■■□□□ 1.82
CIRBP-209ENST00000586555 FZD9O00144 591 aa26.43■■□□□ 1.82
CIRBP-209ENST00000586555 PCNTO95613 3336 aa26.42■■□□□ 1.82
CIRBP-209ENST00000586555 ZNF541Q9H0D2 1346 aa26.42■■□□□ 1.82
CIRBP-209ENST00000586555 POTEIP0CG38 1075 aa26.42■■□□□ 1.82
CIRBP-209ENST00000586555 POTEJP0CG39 1038 aa26.42■■□□□ 1.82
CIRBP-209ENST00000586555 CHADLQ6NUI6 762 aa26.42■■□□□ 1.82
CIRBP-209ENST00000586555 IQCA1LA6NCM1 817 aa26.41■■□□□ 1.82
CIRBP-209ENST00000586555 TCERG1O14776 1098 aaKnown RBP26.41■■□□□ 1.82
CIRBP-209ENST00000586555 VAMP4O75379 141 aa26.41■■□□□ 1.82
CIRBP-209ENST00000586555 HSP90B1P14625 803 aaKnown RBP26.41■■□□□ 1.82
CIRBP-209ENST00000586555 GRIPAP1Q4V328 841 aa26.41■■□□□ 1.82
CIRBP-209ENST00000586555 KSR2Q6VAB6 950 aa26.41■■□□□ 1.82
CIRBP-209ENST00000586555 MYD88Q99836 296 aa26.41■■□□□ 1.82
CIRBP-209ENST00000586555 TMX4Q9H1E5 349 aaPredicted RBP26.41■■□□□ 1.82
CIRBP-209ENST00000586555 TAF1DQ9H5J8 278 aaPredicted RBP26.41■■□□□ 1.82
CIRBP-209ENST00000586555 SPINK5Q9NQ38 1064 aaPredicted RBP26.41■■□□□ 1.82
CIRBP-209ENST00000586555 NEXNQ0ZGT2 675 aa26.4■■□□□ 1.82
CIRBP-209ENST00000586555 METTL22Q9BUU2 404 aaPredicted RBP26.4■■□□□ 1.82
CIRBP-209ENST00000586555 ZNF521Q96K83 1311 aa26.39■■□□□ 1.82
CIRBP-209ENST00000586555 HCLS1P14317 486 aaPredicted RBP26.39■■□□□ 1.82
CIRBP-209ENST00000586555 CCDC191Q8NCU4 936 aa26.39■■□□□ 1.82
CIRBP-209ENST00000586555 MAP3K2Q9Y2U5 619 aa26.39■■□□□ 1.82
CIRBP-209ENST00000586555 FAM89AQ96GI7 184 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms