RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 PLBD2Q8NHP8 589 aa24.64■■□□□ 1.54
TPM4-204ENST00000586499 UTP14AQ9BVJ6 771 aaKnown RBP24.64■■□□□ 1.54
TPM4-204ENST00000586499 LMNB1P20700 586 aa24.63■■□□□ 1.53
TPM4-204ENST00000586499 OLFM4Q6UX06 510 aa24.63■■□□□ 1.53
TPM4-204ENST00000586499 C7orf43Q8WVR3 580 aa24.63■■□□□ 1.53
TPM4-204ENST00000586499 IL16Q14005 1332 aa24.62■■□□□ 1.53
TPM4-204ENST00000586499 ANKRD36CQ5JPF3 1778 aa24.62■■□□□ 1.53
TPM4-204ENST00000586499 CRY2Q49AN0 593 aa24.62■■□□□ 1.53
TPM4-204ENST00000586499 ARFGEF2Q9Y6D5 1785 aa24.62■■□□□ 1.53
TPM4-204ENST00000586499 ATP5J2-PTCD1G3V325 749 aa24.61■■□□□ 1.53
TPM4-204ENST00000586499 TCERG1O14776 1098 aaKnown RBP24.61■■□□□ 1.53
TPM4-204ENST00000586499 ALDH1B1P30837 517 aa24.6■■□□□ 1.53
TPM4-204ENST00000586499 TRMT112Q9UI30 125 aaKnown RBP24.6■■□□□ 1.53
TPM4-204ENST00000586499 RIC1Q4ADV7 1423 aa24.6■■□□□ 1.53
TPM4-204ENST00000586499 FER1L6Q2WGJ9 1857 aa24.6■■□□□ 1.53
TPM4-204ENST00000586499 CCDC88AQ3V6T2 1871 aa24.6■■□□□ 1.53
TPM4-204ENST00000586499 SLC10A5Q5PT55 438 aa24.59■■□□□ 1.53
TPM4-204ENST00000586499 CCDC30Q5VVM6 783 aa24.59■■□□□ 1.53
TPM4-204ENST00000586499 WDR63Q8IWG1 891 aa24.59■■□□□ 1.53
TPM4-204ENST00000586499 RPGRQ92834 1020 aaKnown RBP24.59■■□□□ 1.53
TPM4-204ENST00000586499 NMRK2Q9NPI5 230 aa24.59■■□□□ 1.53
TPM4-204ENST00000586499 KIF3CO14782 793 aa24.58■■□□□ 1.53
TPM4-204ENST00000586499 HCLS1P14317 486 aaPredicted RBP24.58■■□□□ 1.53
TPM4-204ENST00000586499 TWISTNBQ3B726 338 aaPredicted RBP24.58■■□□□ 1.53
TPM4-204ENST00000586499 RIC3Q7Z5B4 369 aa24.58■■□□□ 1.53
TPM4-204ENST00000586499 ISCA1Q9BUE6 129 aa24.58■■□□□ 1.53
TPM4-204ENST00000586499 TAOK3Q9H2K8 898 aa24.58■■□□□ 1.53
TPM4-204ENST00000586499 SPINK5Q9NQ38 1064 aaPredicted RBP24.58■■□□□ 1.53
TPM4-204ENST00000586499 FANCIQ9NVI1 1328 aa24.58■■□□□ 1.52
TPM4-204ENST00000586499 HOXA10P31260 410 aaPredicted RBP24.57■■□□□ 1.52
TPM4-204ENST00000586499 SOGA3Q5TF21 947 aa24.57■■□□□ 1.52
TPM4-204ENST00000586499 NLRP3Q96P20 1036 aa24.57■■□□□ 1.52
TPM4-204ENST00000586499 GOLGA2Q08379 1002 aa24.56■■□□□ 1.52
TPM4-204ENST00000586499 CCDC93Q567U6 631 aa24.56■■□□□ 1.52
TPM4-204ENST00000586499 SLC51AQ86UW1 340 aa24.56■■□□□ 1.52
TPM4-204ENST00000586499 RBM17Q96I25 401 aaKnown RBP24.55■■□□□ 1.52
TPM4-204ENST00000586499 LTBP3Q9NS15 1303 aa24.55■■□□□ 1.52
TPM4-204ENST00000586499 RNF123Q5XPI4 1314 aa24.54■■□□□ 1.52
TPM4-204ENST00000586499 SH3TC1Q8TE82 1336 aa24.54■■□□□ 1.52
TPM4-204ENST00000586499 EXOSC9Q06265 439 aaKnown RBP24.53■■□□□ 1.52
TPM4-204ENST00000586499 RTL5Q5HYW3 569 aaPredicted RBP24.53■■□□□ 1.52
TPM4-204ENST00000586499 FAM89AQ96GI7 184 aa24.53■■□□□ 1.52
TPM4-204ENST00000586499 CRAMP1Q96RY5 1269 aa24.53■■□□□ 1.52
TPM4-204ENST00000586499 MYD88Q99836 296 aa24.53■■□□□ 1.52
TPM4-204ENST00000586499 CHMP4AQ9BY43 222 aa24.53■■□□□ 1.52
TPM4-204ENST00000586499 G2E3Q7L622 706 aa24.52■■□□□ 1.52
TPM4-204ENST00000586499 KDM2BQ8NHM5 1336 aa24.52■■□□□ 1.52
TPM4-204ENST00000586499 ZC3H4Q9UPT8 1303 aaKnown RBP24.52■■□□□ 1.52
TPM4-204ENST00000586499 TIAM2Q8IVF5 1701 aa24.52■■□□□ 1.52
TPM4-204ENST00000586499 FKBP4Q02790 459 aaKnown RBP eCLIP24.51■■□□□ 1.51
TPM4-204ENST00000586499 TRIM28Q13263 835 aaKnown RBP24.51■■□□□ 1.51
TPM4-204ENST00000586499 RTKN2Q8IZC4 609 aa24.51■■□□□ 1.51
TPM4-204ENST00000586499 STK31Q9BXU1 1019 aa24.51■■□□□ 1.51
TPM4-204ENST00000586499 RRAGCQ9HB90 399 aa24.51■■□□□ 1.51
TPM4-204ENST00000586499 LAMB2P55268 1798 aa24.5■■□□□ 1.51
TPM4-204ENST00000586499 SLC4A2P04920 1241 aa24.5■■□□□ 1.51
TPM4-204ENST00000586499 ZNF277Q9NRM2 450 aaPredicted RBP24.5■■□□□ 1.51
TPM4-204ENST00000586499 GLTPD2A6NH11 291 aa24.49■■□□□ 1.51
TPM4-204ENST00000586499 PPEF1O14829 653 aaPredicted RBP24.49■■□□□ 1.51
TPM4-204ENST00000586499 VAMP4O75379 141 aa24.49■■□□□ 1.51
TPM4-204ENST00000586499 DDX58O95786 925 aaKnown RBP24.49■■□□□ 1.51
TPM4-204ENST00000586499 MAP3K2Q9Y2U5 619 aa24.49■■□□□ 1.51
TPM4-204ENST00000586499 ABCC4O15439 1325 aa24.49■■□□□ 1.51
TPM4-204ENST00000586499 METTL22Q9BUU2 404 aaPredicted RBP24.48■■□□□ 1.51
TPM4-204ENST00000586499 DICER1Q9UPY3 1922 aaKnown RBP24.48■■□□□ 1.51
TPM4-204ENST00000586499 SNED1Q8TER0 1413 aa24.47■■□□□ 1.51
TPM4-204ENST00000586499 PI4KAP2A4QPH2 592 aa24.47■■□□□ 1.51
TPM4-204ENST00000586499 KSR2Q6VAB6 950 aa24.47■■□□□ 1.51
TPM4-204ENST00000586499 PI4KAP1Q8N8J0 262 aa24.47■■□□□ 1.51
TPM4-204ENST00000586499 JARID2Q92833 1246 aaPredicted RBP24.47■■□□□ 1.51
TPM4-204ENST00000586499 DDX60Q8IY21 1712 aaKnown RBP24.47■■□□□ 1.51
TPM4-204ENST00000586499 ZNF521Q96K83 1311 aa24.46■■□□□ 1.51
TPM4-204ENST00000586499 IRS4O14654 1257 aaPredicted RBP24.45■■□□□ 1.5
TPM4-204ENST00000586499 CC2D2BQ6DHV5 1058 aa24.45■■□□□ 1.5
TPM4-204ENST00000586499 MYH16Q9H6N6 1097 aa24.45■■□□□ 1.5
TPM4-204ENST00000586499 TOMM70O94826 608 aa24.44■■□□□ 1.5
TPM4-204ENST00000586499 DPY19L2Q6NUT2 758 aa24.44■■□□□ 1.5
TPM4-204ENST00000586499 DDX46Q7L014 1031 aaKnown RBP24.44■■□□□ 1.5
TPM4-204ENST00000586499 ZBTB38Q8NAP3 1195 aaPredicted RBP24.44■■□□□ 1.5
TPM4-204ENST00000586499 CCDC191Q8NCU4 936 aa24.44■■□□□ 1.5
TPM4-204ENST00000586499 TAF1P21675 1872 aa24.44■■□□□ 1.5
TPM4-204ENST00000586499 IARSP41252 1262 aaKnown RBP24.43■■□□□ 1.5
TPM4-204ENST00000586499 PSMD1Q99460 953 aa24.43■■□□□ 1.5
TPM4-204ENST00000586499 CWC25Q9NXE8 425 aaPredicted RBP24.43■■□□□ 1.5
TPM4-204ENST00000586499 ATP6V0A2Q9Y487 856 aa24.43■■□□□ 1.5
TPM4-204ENST00000586499 CCER2I3L3R5 266 aa24.42■■□□□ 1.5
TPM4-204ENST00000586499 BBOX1O75936 387 aa24.42■■□□□ 1.5
TPM4-204ENST00000586499 DDNO94850 711 aaPredicted RBP24.42■■□□□ 1.5
TPM4-204ENST00000586499 IGKV5-2P06315 115 aa24.42■■□□□ 1.5
TPM4-204ENST00000586499 FLIIQ13045 1269 aa24.42■■□□□ 1.5
TPM4-204ENST00000586499 SF3B3Q15393 1217 aaKnown RBP24.42■■□□□ 1.5
TPM4-204ENST00000586499 POTECB2RU33 542 aa24.41■■□□□ 1.5
TPM4-204ENST00000586499 GRAPQ13588 217 aa24.41■■□□□ 1.5
TPM4-204ENST00000586499 CWF19L2Q2TBE0 894 aaKnown RBP24.41■■□□□ 1.5
TPM4-204ENST00000586499 C16orf71Q8IYS4 520 aaPredicted RBP24.41■■□□□ 1.5
TPM4-204ENST00000586499 GRAPLQ8TC17 118 aaPredicted RBP24.41■■□□□ 1.5
TPM4-204ENST00000586499 PCCAP05165 728 aaPredicted RBP24.4■■□□□ 1.5
TPM4-204ENST00000586499 VEGFAP15692 232 aaPredicted RBP24.4■■□□□ 1.5
TPM4-204ENST00000586499 FKBP5Q13451 457 aaPredicted RBP24.39■■□□□ 1.49
TPM4-204ENST00000586499 SP8Q8IXZ3 490 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms