RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 DDNO94850 711 aaPredicted RBP18.39■□□□□ 0.53
HDAC5-203ENST00000586339 HSP90AB3PQ58FF7 597 aa18.39■□□□□ 0.53
HDAC5-203ENST00000586339 JMYQ8N9B5 988 aa18.39■□□□□ 0.53
HDAC5-203ENST00000586339 PSMD1Q99460 953 aa18.39■□□□□ 0.53
HDAC5-203ENST00000586339 ZNF277Q9NRM2 450 aaPredicted RBP18.39■□□□□ 0.53
HDAC5-203ENST00000586339 HOXB7P09629 217 aa18.38■□□□□ 0.53
HDAC5-203ENST00000586339 HTRA3P83110 453 aa18.38■□□□□ 0.53
HDAC5-203ENST00000586339 PROSER3Q2NL68 480 aa18.38■□□□□ 0.53
HDAC5-203ENST00000586339 PRKRIP1Q9H875 184 aaPredicted RBP18.38■□□□□ 0.53
HDAC5-203ENST00000586339 TRIM35Q9UPQ4 493 aa18.38■□□□□ 0.53
HDAC5-203ENST00000586339 IARSP41252 1262 aaKnown RBP18.37■□□□□ 0.53
HDAC5-203ENST00000586339 NEUROD2Q15784 382 aa18.37■□□□□ 0.53
HDAC5-203ENST00000586339 OLFM4Q6UX06 510 aa18.37■□□□□ 0.53
HDAC5-203ENST00000586339 RBM17Q96I25 401 aaKnown RBP18.37■□□□□ 0.53
HDAC5-203ENST00000586339 CRAMP1Q96RY5 1269 aa18.37■□□□□ 0.53
HDAC5-203ENST00000586339 DDX21Q9NR30 783 aaKnown RBP eCLIP18.37■□□□□ 0.53
HDAC5-203ENST00000586339 IFFO2Q5TF58 517 aa18.36■□□□□ 0.53
HDAC5-203ENST00000586339 CHADLQ6NUI6 762 aa18.36■□□□□ 0.53
HDAC5-203ENST00000586339 SYNE4Q8N205 404 aa18.36■□□□□ 0.53
HDAC5-203ENST00000586339 UTP14AQ9BVJ6 771 aaKnown RBP18.36■□□□□ 0.53
HDAC5-203ENST00000586339 ADAMTS8Q9UP79 889 aa18.36■□□□□ 0.53
HDAC5-203ENST00000586339 ADAMTSL1Q8N6G6 1762 aa18.35■□□□□ 0.53
HDAC5-203ENST00000586339 ZNF541Q9H0D2 1346 aa18.35■□□□□ 0.53
HDAC5-203ENST00000586339 FZD9O00144 591 aa18.35■□□□□ 0.53
HDAC5-203ENST00000586339 ANXA1P04083 346 aa18.35■□□□□ 0.53
HDAC5-203ENST00000586339 SLC10A5Q5PT55 438 aa18.35■□□□□ 0.53
HDAC5-203ENST00000586339 COPS6Q7L5N1 327 aa18.35■□□□□ 0.53
HDAC5-203ENST00000586339 NLRP3Q96P20 1036 aa18.35■□□□□ 0.53
HDAC5-203ENST00000586339 XAGE3Q8WTP9 111 aa18.34■□□□□ 0.53
HDAC5-203ENST00000586339 DDX60Q8IY21 1712 aaKnown RBP18.33■□□□□ 0.52
HDAC5-203ENST00000586339 PPEF1O14829 653 aaPredicted RBP18.33■□□□□ 0.52
HDAC5-203ENST00000586339 LDHDQ86WU2 507 aa18.33■□□□□ 0.52
HDAC5-203ENST00000586339 JDP2Q8WYK2 163 aa18.33■□□□□ 0.52
HDAC5-203ENST00000586339 CFAP44Q96MT7 982 aa18.33■□□□□ 0.52
HDAC5-203ENST00000586339 TAF1DQ9H5J8 278 aaPredicted RBP18.33■□□□□ 0.52
HDAC5-203ENST00000586339 LAS1LQ9Y4W2 734 aaKnown RBP18.33■□□□□ 0.52
HDAC5-203ENST00000586339 TCIRG1Q13488 830 aa18.32■□□□□ 0.52
HDAC5-203ENST00000586339 KRT24Q2M2I5 525 aa18.32■□□□□ 0.52
HDAC5-203ENST00000586339 HDGFL1Q5TGJ6 251 aa18.32■□□□□ 0.52
HDAC5-203ENST00000586339 NLRP10Q86W26 655 aa18.32■□□□□ 0.52
HDAC5-203ENST00000586339 GPC2Q8N158 579 aa18.32■□□□□ 0.52
HDAC5-203ENST00000586339 NECTIN2Q92692 538 aa18.32■□□□□ 0.52
HDAC5-203ENST00000586339 CHPF2Q9P2E5 772 aa18.32■□□□□ 0.52
HDAC5-203ENST00000586339 AIMP1Q12904 312 aaKnown RBP18.31■□□□□ 0.52
HDAC5-203ENST00000586339 C3orf67Q6ZVT6 689 aa18.31■□□□□ 0.52
HDAC5-203ENST00000586339 TMX4Q9H1E5 349 aaPredicted RBP18.31■□□□□ 0.52
HDAC5-203ENST00000586339 DBF4Q9UBU7 674 aaPredicted RBP18.31■□□□□ 0.52
HDAC5-203ENST00000586339 HACL1Q9UJ83 578 aa18.31■□□□□ 0.52
HDAC5-203ENST00000586339 COL4A5P29400 1685 aa18.31■□□□□ 0.52
HDAC5-203ENST00000586339 ABCC4O15439 1325 aa18.3■□□□□ 0.52
HDAC5-203ENST00000586339 SH3TC1Q8TE82 1336 aa18.3■□□□□ 0.52
HDAC5-203ENST00000586339 LRRC37AA6NMS7 1700 aa18.3■□□□□ 0.52
HDAC5-203ENST00000586339 POTEIP0CG38 1075 aa18.3■□□□□ 0.52
HDAC5-203ENST00000586339 POTEJP0CG39 1038 aa18.3■□□□□ 0.52
HDAC5-203ENST00000586339 CALD1Q05682 793 aaKnown RBP18.3■□□□□ 0.52
HDAC5-203ENST00000586339 CREBZFQ9NS37 354 aa18.3■□□□□ 0.52
HDAC5-203ENST00000586339 TAF1P21675 1872 aa18.3■□□□□ 0.52
HDAC5-203ENST00000586339 EIF6P56537 245 aaKnown RBP18.29■□□□□ 0.52
HDAC5-203ENST00000586339 PNMA8AQ86V59 439 aaPredicted RBP18.29■□□□□ 0.52
HDAC5-203ENST00000586339 PLBD2Q8NHP8 589 aa18.29■□□□□ 0.52
HDAC5-203ENST00000586339 VPS33BQ9H267 617 aa18.29■□□□□ 0.52
HDAC5-203ENST00000586339 ATP6V0A2Q9Y487 856 aa18.29■□□□□ 0.52
HDAC5-203ENST00000586339 ZNF853P0CG23 659 aa18.28■□□□□ 0.52
HDAC5-203ENST00000586339 EPHX2P34913 555 aa18.28■□□□□ 0.52
HDAC5-203ENST00000586339 LARGE2Q8N3Y3 721 aa18.28■□□□□ 0.52
HDAC5-203ENST00000586339 MBIPQ9NS73 344 aa18.28■□□□□ 0.52
HDAC5-203ENST00000586339 IFT57Q9NWB7 429 aa18.28■□□□□ 0.52
HDAC5-203ENST00000586339 HYPKQ9NX55 129 aa18.28■□□□□ 0.52
HDAC5-203ENST00000586339 TRMT112Q9UI30 125 aaKnown RBP18.28■□□□□ 0.52
HDAC5-203ENST00000586339 PASKQ96RG2 1323 aa18.27■□□□□ 0.52
HDAC5-203ENST00000586339 LTBP1Q14766 1721 aa18.27■□□□□ 0.52
HDAC5-203ENST00000586339 BBOX1O75936 387 aa18.27■□□□□ 0.52
HDAC5-203ENST00000586339 ZEB1P37275 1124 aaPredicted RBP18.27■□□□□ 0.52
HDAC5-203ENST00000586339 DUSP27Q5VZP5 1158 aa18.27■□□□□ 0.52
HDAC5-203ENST00000586339 ANKRD13DQ6ZTN6 518 aa18.27■□□□□ 0.52
HDAC5-203ENST00000586339 SUPT20HQ8NEM7 779 aa18.27■□□□□ 0.52
HDAC5-203ENST00000586339 APAF1O14727 1248 aa18.26■□□□□ 0.51
HDAC5-203ENST00000586339 GNAI1P63096 354 aa18.26■□□□□ 0.51
HDAC5-203ENST00000586339 RTFDC1Q9BY42 306 aaPredicted RBP18.26■□□□□ 0.51
HDAC5-203ENST00000586339 PPIP5K2O43314 1243 aa18.25■□□□□ 0.51
HDAC5-203ENST00000586339 HCLS1P14317 486 aaPredicted RBP18.25■□□□□ 0.51
HDAC5-203ENST00000586339 EAPPQ56P03 285 aaPredicted RBP18.25■□□□□ 0.51
HDAC5-203ENST00000586339 DDX46Q7L014 1031 aaKnown RBP18.25■□□□□ 0.51
HDAC5-203ENST00000586339 TMC4Q7Z404 712 aa18.25■□□□□ 0.51
HDAC5-203ENST00000586339 NIM1KQ8IY84 436 aa18.25■□□□□ 0.51
HDAC5-203ENST00000586339 ISCA1Q9BUE6 129 aa18.25■□□□□ 0.51
HDAC5-203ENST00000586339 TRPM7Q96QT4 1865 aa18.24■□□□□ 0.51
HDAC5-203ENST00000586339 TCERG1O14776 1098 aaKnown RBP18.24■□□□□ 0.51
HDAC5-203ENST00000586339 LMOD1P29536 600 aaPredicted RBP18.24■□□□□ 0.51
HDAC5-203ENST00000586339 GRAPQ13588 217 aa18.24■□□□□ 0.51
HDAC5-203ENST00000586339 SP8Q8IXZ3 490 aa18.24■□□□□ 0.51
HDAC5-203ENST00000586339 GRAPLQ8TC17 118 aaPredicted RBP18.24■□□□□ 0.51
HDAC5-203ENST00000586339 CHMP4AQ9BY43 222 aa18.24■□□□□ 0.51
HDAC5-203ENST00000586339 CACNA1FO60840 1977 aa18.23■□□□□ 0.51
HDAC5-203ENST00000586339 ITGBL1O95965 494 aaPredicted RBP18.23■□□□□ 0.51
HDAC5-203ENST00000586339 TRIM28Q13263 835 aaKnown RBP18.23■□□□□ 0.51
HDAC5-203ENST00000586339 SLC51AQ86UW1 340 aa18.23■□□□□ 0.51
HDAC5-203ENST00000586339 GJA3Q9Y6H8 435 aa18.23■□□□□ 0.51
HDAC5-203ENST00000586339 SCNN1DP51172 638 aa18.22■□□□□ 0.51
HDAC5-203ENST00000586339 AOC3Q16853 763 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms